FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1161.ptfa, 718 aa vs ./tmplib.26680 library 1768299 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.5519+/-0.00405; mu= 16.7082+/- 0.270 mean_var=73.8542+/-16.787, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1492 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00088 ( 904 res) mfj58158 ( 904) 242 62 3.1e-10 mKIAA0088 ( 775 res) mbh03415 ( 775) 238 61 5.1e-10 >>mFLJ00088 ( 904 res) mfj58158 (904 aa) initn: 282 init1: 142 opt: 242 Z-score: 276.1 bits: 62.0 E(): 3.1e-10 Smith-Waterman score: 348; 24.379% identity (27.763% ungapped) in 443 aa overlap (302-706:335-761) 280 290 300 310 320 mKIAA1 AGRTAAPELSYRVCVGSDVTSIHKYMVRRYFNKPSRVPASEAFRDPIWSTWALHGR--AV :.. : . ...:. :..: . : mFLJ00 KVRCRTDVHWMSESGIIDVFLLTGPTPADVFKQYSYITGTQAM-PPLFSLGYHQCRWNYE 310 320 330 340 350 360 330 340 350 360 370 380 mKIAA1 DQNKVLQFAQQIRQHRFNSSHLEIDDMYTPAYGDFNFDEGKFPNASDMFRRLRDAGFRVT :.. : . .: . . . .: .: :..:. .: : . : . ::. ... mFLJ00 DEQDVKAVDAGFDEHDIPYDVIWLDIEHTEDKKYFTWDKKRFANPKRMQELLRSKKRKLV 370 380 390 400 410 420 390 400 410 420 430 440 mKIAA1 LWVHPF--VNYNSSSFGEGVERELFVREPTGRLPALVRWWNGIGAVLDFTHPEAREWFQG . : :. . . .... :. .::..: : : : :... ::::.:..:::... mFLJ00 VISDPHIKVDPDYTVYAQAKEQGFFVKNPEGGDFEGVCW-PGLSSYLDFTNPKVREWYSS 430 440 450 460 470 480 450 460 470 480 490 500 mKIAA1 HLRRLRLRYNVTSFKF---DAGEVS-YLPRDFSTYRPLSDPSVWSRRYTEMAEPFFS--- : . . . :.. : : .: : . ... .. . : .: . :.. mFLJ00 -LFAFPVYQGSTDILFLWNDMNEPSVFRGPELTMHKSAVHYGDWEHRELHNIYGFYQQMA 490 500 510 520 530 540 510 520 530 540 mKIAA1 ----LAEVRVGYQSQNI--SCFFRLVDR-DSVWGYDLG-----LRSLIPAVLTVSMLGYP : . : . . :: .. .:: : :. :: .::.:. : mFLJ00 TAEGLIQRSKGKERPFVLSRSFFAGSQKYGAVWTGDNKAEWSYLKISIPMLLTLSVSGIS 550 560 570 580 590 600 550 560 570 580 590 600 mKIAA1 FILPDMIGGNAVPERTAGRQDGPGPERELYVRWLEVAAFMPAMQFSIP-------PWQYD : : .:: : .:: :: ::: ...:..: .. :: . mFLJ00 FCGAD-VGG------FIG-----NPEAELLVRWYQAGAYQPFFRGHATMNTKRREPWLFG 610 620 630 640 610 620 630 640 650 660 mKIAA1 AEVVAIAHKFAALRASLVAPLLLELAGEITDTGDPIVRPLWWIAPGDETAHRIDSQFLIG : . . .. : .:. : : : . ...:..:::: : : . .......: mFLJ00 EEYTQLIREAIRQRYALL-PYLYSLFYHAHVSSQPVMRPLWVEYPDDLETFAVEDEYMLG 650 660 670 680 690 700 670 680 690 700 710 mKIAA1 DTLLVAPVLEPGKQERDVYLPAGK--WRS------YKGELFDKTPVLLTDYPVDLDEVAY ..::: :: .: ::.::.. : . .:: : :: : :: mFLJ00 SALLVHPVTDPQTATIDVFLPGSDEVWYDSKTFAYWKGGCTVKIPVTLDTIPVFQRGGSV 710 720 730 740 750 760 mKIAA1 FTWAS mFLJ00 VPVKTTVGTSTGWMADSPYGLRVALSPQGSAVGELYLDDGHSFQYLHQDQFLYRKFLFCS 770 780 790 800 810 820 >>mKIAA0088 ( 775 res) mbh03415 (775 aa) initn: 237 init1: 155 opt: 238 Z-score: 272.3 bits: 61.0 E(): 5.1e-10 Smith-Waterman score: 313; 23.958% identity (27.845% ungapped) in 480 aa overlap (273-706:175-633) 250 260 270 280 290 mKIAA1 SVPFHLGWNSTERSMRLQARYHDTSYKPPAGRTAAPELSYRVCVGSDVTSIHKYM---VR : .:. . : : . .. .. : mKIAA0 FWLNAAETWVDISSNTAGKTLFGKMLDYLQGSGETPQTDIRWMSESGIIDVFLMLGPSVF 150 160 170 180 190 200 300 310 320 330 340 350 mKIAA1 RYFNKPSRVPASEAFRDPIWSTWALHGR--AVDQNKVLQFAQQIRQHRFNSSHLEIDDMY : . . . ...:. :..: ..: :. ::. : . .: . . . .: . mKIAA0 DVFRQYASLTGTQAL-PPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNMPCDVIWLDIEH 210 220 230 240 250 260 360 370 380 390 400 410 mKIAA1 TPAYGDFNFDEGKFPNASDMFRRLRDAGFRVTLWVHPFVNYNSSSFGEGVEREL-----F . . :..: .::. .:...: . ... : : .. .: : :..:: . mKIAA0 ADGKRYFTWDPTRFPQPLNMLEHLASKRRKLVAIVDPHIKVDS---GYRVHEELRNHGLY 270 280 290 300 310 320 420 430 440 450 460 mKIAA1 VREPTGRLPALVRW-WNGIGAVLDFTHPEAREW---------FQGHLRRLRLRYNVTSFK :. : : : : .. :::.:. : : ..: : . ... . mKIAA0 VKTRDGS--DYEGWCWPGSASYPDFTNPRMRAWWSNMFSFDNYEGSAPNLYVWNDMNEPS 330 340 350 360 370 470 480 490 500 510 mKIAA1 -FDAGEVSYLPRDFSTYRPLSDPSVWSRR--YTEMAEPFFSLAEVRVGYQSQNI--SCFF :.. ::..: .: : .. . :..:: .: . : . . :: mKIAA0 VFNGPEVTML-KDAVHYGGWEHRDIHNIYGLYVHMATAD-GLIQRSGGIERPFVLSRAFF 380 390 400 410 420 430 520 530 540 550 560 570 mKIAA1 RLVDR-DSVWGYDLG-----LRSLIPAVLTVSMLGYPFILPDMIGGNAVPERTAGRQDGP .: .:: : :. :: :.....: : : .:: mKIAA0 SGSQRFGAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGAD-VGGFF-----------K 440 450 460 470 480 580 590 600 610 620 mKIAA1 GPERELYVRWLEVAAFMPAMQFSI-------PPWQYDAEVVAIAHKFAALRASLVAPLLL .:: :: ::: ...:..: .. :: .. . : ::. :. mKIAA0 NPEPELLVRWYQMGAYQPFFRAHAHLDTGRREPWLLASQYQDAIRDALFQRYSLL-PFWY 490 500 510 520 530 540 630 640 650 660 670 680 mKIAA1 ELAGEITDTGDPIVRPLWWIAPGDETAHRIDSQFLIGDTLLVAPVLEPGKQERDVYLPAG : . : :..:::: : : .. :..::..::.::. :: . : . .::::. mKIAA0 TLFYQAHKEGFPVMRPLWVQYPEDMSTFSIEDQFMLGDALLIHPVSDAGAHGVQVYLPGQ 550 560 570 580 590 600 690 700 710 mKIAA1 K--W---RSYKGELFDKT---PVLLTDYPVDLDEVAYFTWAS . : .::. . .: :: :.. :: mKIAA0 EEVWYDIQSYQKHHGPQTLYLPVTLSSIPVFQRGGTIVPRWMRVRRSSDCMKDDPITLFV 610 620 630 640 650 660 718 residues in 1 query sequences 1768299 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:37:29 2006 done: Mon Mar 27 10:37:30 2006 Scan time: 0.840 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]