FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1682.ptfa, 801 aa vs ./tmplib.26680 library 1768216 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.6720+/-0.00485; mu= 8.4897+/- 0.323 mean_var=137.9806+/-32.946, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1092 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4176 ( 401 res) mbg04205 ( 401) 392 73 6.3e-14 mKIAA1073 ( 424 res) meg01168 ( 424) 353 67 4.6e-12 mKIAA0647 ( 1186 res) mbg01911 (1186) 349 67 1.5e-11 mKIAA3020 ( 1884 res) mbg15810 (1884) 309 61 1.7e-09 >>mKIAA4176 ( 401 res) mbg04205 (401 aa) initn: 414 init1: 210 opt: 392 Z-score: 342.4 bits: 73.2 E(): 6.3e-14 Smith-Waterman score: 403; 36.082% identity (39.106% ungapped) in 194 aa overlap (407-598:135-315) 380 390 400 410 420 430 mKIAA1 SLQEIQSAYCKFKQLFLIDNSSEFWDTDIKWFSLLESSSWLDIIRRCLKKAIEITECLEA :.: :::. ::. :. : ::.... . . mKIAA4 SFLDIHNIHVMRESLKKVKDIVYPNIEESHWLSSLESTHWLEHIKLVLTGAIQVADQVSS 110 120 130 140 150 160 440 450 460 470 480 490 mKIAA1 QNVNVLLLEENASDLCCLLSSLVQVMMDAHCRTRTGFQSLIQKEWVMGGHSFLDRCNH-- . .::. .. : :.::...:.:. :: ::. :.::::. ::.: .: .: mKIAA4 GKSSVLVHCSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWISFGHKFASRIGHGD 170 180 190 200 210 220 500 510 520 530 540 550 mKIAA1 LHQSDKEEVPIFLLFLDCVWQLVHQYPPAFEFTETYLTVLSDSLYIPIFSTFFFNSPHQK ...: .. :::: :.:::::. .:.: ::::.: .: .. : :: :.::.:: mKIAA4 KNHADADRSPIFLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRFGTFLFNC---- 230 240 250 260 270 280 560 570 580 590 600 610 mKIAA1 DTNMGRENLDAQSKPLTLLTVWDWSVQFEPKAQTLLRNPLYVEKPKLDRGQQKGSRFKHQ :. :..: .. : ::. : . ..::.:... mKIAA4 DSARERQKLTERTVSL-------WSLINSNKDK--FKNPFYTKEINRVLYPVASMRHLEL 290 300 310 320 330 620 630 640 650 660 670 mKIAA1 RQLSLPLTQSKSSPKRGFFREETDHLIKNLLGKRISKLINSSDDLQDSSREFYDSWHSKP mKIAA4 WVNYYIRWNPRVKQQQPNPVEQRYMELLALRDDYIKRLEELQLANSAKLADAPASTSSSS 340 350 360 370 380 390 >>mKIAA1073 ( 424 res) meg01168 (424 aa) initn: 417 init1: 211 opt: 353 Z-score: 308.9 bits: 67.1 E(): 4.6e-12 Smith-Waterman score: 366; 36.000% identity (39.873% ungapped) in 175 aa overlap (424-595:177-337) 400 410 420 430 440 450 mKIAA1 IDNSSEFWDTDIKWFSLLESSSWLDIIRRCLKKAIEITECLEAQNVNVLLLEENASDLCC : :..:.. .:. ...:.. .. : mKIAA1 RVASFRSRGRIPVSRLSRYIHHFKTCFQLILAGALRIADKVESGKTSVVVHCSDGWDRTA 150 160 170 180 190 200 460 470 480 490 500 510 mKIAA1 LLSSLVQVMMDAHCRTRTGFQSLIQKEWVMGGHSFLDRCNH--LHQSDKEEVPIFLLFLD :.::...:.:.. :: ::. :..:::. :: : : .: ...: .. :.:: :.: mKIAA1 QLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFID 210 220 230 240 250 260 520 530 540 550 560 570 mKIAA1 CVWQLVHQYPPAFEFTETYLTVLSDSLYIPIFSTFFFNSPHQKDTNMGRENLDAQSKPLT ::::...:.: ::::.: .: .. : :: .:.::. :: .:. :.::: : mKIAA1 CVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQR----GKENL-----PKK 270 280 290 300 310 580 590 600 610 620 630 mKIAA1 LLTVWDW-SVQFEPKAQTLLRNPLYVEKPKLDRGQQKGSRFKHQRQLSLPLTQSKSSPKR ...:.. . :.: . :::: mKIAA1 TVSLWSYINSQLED-----FTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNPRMKPQE 320 330 340 350 360 370 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 317 init1: 202 opt: 349 Z-score: 299.7 bits: 66.9 E(): 1.5e-11 Smith-Waterman score: 369; 25.816% identity (27.974% ungapped) in 337 aa overlap (375-692:336-665) 350 360 370 380 390 400 mKIAA1 QVQKSFLDGIYKTIHRPPYEMVKTEDLSSNFLSLQEIQSAYCKFKQLFLIDNSSEFWDTD :... .:.. .:. : . :.. : . mKIAA0 DARSYTAAVANRAKGGGCECEEYYPNCEVLFMGMANIHAIRNSFQYLRAV--CSQMPDPS 310 320 330 340 350 360 410 420 430 440 450 460 mKIAA1 IKWFSLLESSSWLDIIRRCLKKAIEITECLEAQNVNVLLLEENASDLCCLLSSLVQVMMD .:.: :::..::. . :: :. ... .. .. ::. .. : . .:.....: mKIAA0 -NWLSALESTKWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLD 370 380 390 400 410 420 470 480 490 500 510 520 mKIAA1 AHCRTRTGFQSLIQKEWVMGGHSFLDRCNHLHQSD--KEEVPIFLLFLDCVWQLVHQYPP . :: ::: :....:. ::.: :::.: .... .:. :.:: .:: : ::..:.: mKIAA0 PYYRTLEGFQVLVESDWLDFGHKFGDRCGHQENAEDQNEQCPVFLQWLDSVHQLLKQFPC 430 440 450 460 470 480 530 540 550 560 570 580 mKIAA1 AFEFTETYLTVLSDSLYIPIFSTFFFNSPHQKDTNMGRENLDAQSKPL-TLLTVWDWSVQ :::.:..:. : . : ...::. :.: ... ..:. .. . .:: . . . . mKIAA0 LFEFNEAFLVKLVQHTYSCLYGTFLANNPCERE----KRNIYKRTCSVWALLRAGNKNFH 490 500 510 520 530 590 600 610 620 630 mKIAA1 ---FEPKAQTLLRNPLYVEKPKLDRG-----QQKGSRFKHQRQLSL-PLTQSKSSPKRGF . : ....:. .:. .: . .. . ... .: : :..::. :.. mKIAA0 NFLYTPGSDVVLHPVCHVRALHLWTAVYLPASSPCTLGEENMDLYLSPVAQSQEFSGRSL 540 550 560 570 580 590 640 650 660 670 680 mKIAA1 FREETDHLIKNLLG--KRISKLINSSDD--LQDSSREFYDS---WHSKPTDYHGLLLPHI : . . .::. : : .:.: :.. :.: : :::.: . .. . mKIAA0 DRLPKTRSMDDLLSACDTSSPLTRTSSDPNLNNHSQEVRGSLEPWHSSPEGAETVIDSGV 600 610 620 630 640 650 690 700 710 720 730 740 mKIAA1 EGPEIKVWAQRYLRWIPEAQILGGGRVATMGKLLEMMEEVQSLQEKIEARHHRQEAVHAE .:.. : mKIAA0 GSPQLTVGEMGLPPPLPSSQKEYLSNKPFKGHKSCSLSYKLLNTSVSWEMKSNTSDIKVL 660 670 680 690 700 710 >>mKIAA3020 ( 1884 res) mbg15810 (1884 aa) initn: 337 init1: 131 opt: 309 Z-score: 263.0 bits: 60.8 E(): 1.7e-09 Smith-Waterman score: 309; 27.402% identity (28.731% ungapped) in 281 aa overlap (340-612:1332-1607) 310 320 330 340 350 360 mKIAA1 RFQGHGIPIWCWSCHNGSALLKMSALPKEQDDGALQVQKSFLDGIYKTIHRPPYEMVKTE :.: :. :.. : : . . :. . mKIAA3 GRSSGLGSDVGSRLAGRDLLSTPHTNGAPPDSGFLRPQRAAL---YIIGDKAQLKGVRPD 1310 1320 1330 1340 1350 370 380 390 400 410 420 mKIAA1 DLSS-NFLSLQ--EIQSAYCKFKQLF--LIDNSSEFWDTDIKWFSLLESSSWLDIIRRCL :.. ... .. : ... .::.:. . . . ... ::.: :: :.. : mKIAA3 PLQQWELVPIEVFEARQVKASFKKLLKACVPGCPATEPSPASFLRSLEDSEWLIQIHKLL 1360 1370 1380 1390 1400 1410 430 440 450 460 470 480 mKIAA1 KKAIEITECLEAQNVNVLLLEENASDLCCLLSSLVQVMMDAHCRTRTGFQSLIQKEWVMG . .. ..: :.. . .::. :.. :. . ::::.. : :: ::. :..:::. mKIAA3 QISVLVVELLDSGS-SVLVSLEDGWDITTQVVSLVQLLSDPFYRTLEGFRLLVEKEWLSF 1420 1430 1440 1450 1460 1470 490 500 510 520 530 540 mKIAA1 GHSFLDRCNH-LHQSDKEEVPIFLLFLDCVWQLVHQYPPAFEFTETYLTVLSDSLYIPIF :: : : : : ... .:.:: ::::: :. :.: :::.. :: :. : mKIAA3 GHRFSHRGAHTLAGQSSGFTPVFLQFLDCVHQVHLQFPMEFEFSQFYLKFLGYHHTSRRF 1480 1490 1500 1510 1520 1530 550 560 570 580 590 600 mKIAA1 STFFFNSPHQK-DTNMGRENLDAQSKPLTLLTVWDWSVQFEPKAQTLLRNPLYV-EKPKL ::...: ... . .. :. . :. .::.. :. : .. : :. : .. mKIAA3 RTFLLDSDYERIELGLLYEEKGERRGQLACKSVWEY-VDRLSKRTPMFYNYTYAPEDTEV 1540 1550 1560 1570 1580 1590 610 620 630 640 650 660 mKIAA1 DRGQQKGSRFKHQRQLSLPLTQSKSSPKRGFFREETDHLIKNLLGKRISKLINSSDDLQD : .. : .: mKIAA3 LRPYSNVSNLKVWDFYTEETLAEGPPYDWELAQGPPEPPEEERPDGGAPQSRRRVVWPCY 1600 1610 1620 1630 1640 1650 801 residues in 1 query sequences 1768216 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:50:52 2006 done: Mon Mar 27 10:50:53 2006 Scan time: 0.890 Display time: 0.120 Function used was FASTA [version 3.4t11 Apr 17, 2002]