# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh02730.fasta.nr -Q ../query/mKIAA1891.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1891, 1086 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918267 sequences Expectation_n fit: rho(ln(x))= 5.2218+/-0.000189; mu= 14.3420+/- 0.011 mean_var=76.6230+/-15.014, 0's: 27 Z-trim: 40 B-trim: 1509 in 1/66 Lambda= 0.146519 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|38503388|sp|Q8BW70.2|UBP38_MOUSE RecName: Full= (1042) 6893 1467.3 0 gi|26342456|dbj|BAC34890.1| unnamed protein produc (1042) 6888 1466.2 0 gi|26344009|dbj|BAC35661.1| unnamed protein produc (1042) 6887 1466.0 0 gi|109075765|ref|XP_001092815.1| PREDICTED: simila (1041) 6347 1351.9 0 gi|38372866|sp|Q8NB14.2|UBP38_HUMAN RecName: Full= (1042) 6298 1341.5 0 gi|114596187|ref|XP_517457.2| PREDICTED: hypotheti (1042) 6286 1339.0 0 gi|149698194|ref|XP_001502179.1| PREDICTED: ubiqui (1041) 6268 1335.2 0 gi|151553558|gb|AAI48041.1| USP38 protein [Bos tau (1040) 6186 1317.9 0 gi|73983882|ref|XP_533279.2| PREDICTED: similar to (1037) 6009 1280.4 0 gi|73909113|gb|AAH39115.1| USP38 protein [Homo sap (1004) 5921 1261.8 0 gi|114596195|ref|XP_001142522.1| PREDICTED: ubiqui (1004) 5909 1259.3 0 gi|126331343|ref|XP_001367345.1| PREDICTED: hypoth (1045) 5806 1237.5 0 gi|74197938|dbj|BAC33659.2| unnamed protein produc ( 776) 5127 1093.9 0 gi|114596191|ref|XP_001142743.1| PREDICTED: hypoth (1016) 5101 1088.5 0 gi|118089854|ref|XP_420421.2| PREDICTED: hypotheti (1035) 4984 1063.8 0 gi|109075769|ref|XP_001092467.1| PREDICTED: simila ( 978) 4953 1057.2 0 gi|224049305|ref|XP_002192723.1| PREDICTED: ubiqui (1019) 4946 1055.7 0 gi|114596193|ref|XP_001142656.1| PREDICTED: hypoth ( 979) 4897 1045.4 0 gi|51703474|gb|AAH81036.1| MGC81730 protein [Xenop (1037) 4873 1040.3 0 gi|73983886|ref|XP_855693.1| PREDICTED: similar to (1005) 4787 1022.1 0 gi|73983884|ref|XP_855663.1| PREDICTED: similar to ( 980) 4542 970.3 0 gi|149635662|ref|XP_001513216.1| PREDICTED: hypoth ( 898) 4270 912.8 0 gi|16553987|dbj|BAB71627.1| unnamed protein produc ( 706) 4131 883.3 0 gi|148669387|gb|EDL01334.1| mCG129460 [Mus musculu ( 572) 3630 777.4 0 gi|148678939|gb|EDL10886.1| mCG119517 [Mus musculu ( 523) 3459 741.2 3.4e-211 gi|119625482|gb|EAX05077.1| ubiquitin specific pep ( 587) 3365 721.3 3.6e-205 gi|149037936|gb|EDL92296.1| ubiquitin specific pro ( 501) 3249 696.8 7.7e-198 gi|189514882|ref|XP_001919108.1| PREDICTED: simila (1014) 2981 640.4 1.5e-180 gi|73983888|ref|XP_855729.1| PREDICTED: similar to ( 734) 2445 527.0 1.5e-146 gi|13445482|gb|AAK26248.1|AF211481_1 HP43.8KD [Hom ( 397) 2286 493.1 1.2e-136 gi|224043711|ref|XP_002189432.1| PREDICTED: ubiqui ( 996) 2113 456.9 2.5e-125 gi|118085252|ref|XP_417222.2| PREDICTED: similar t ( 997) 2108 455.8 5.2e-125 gi|126327730|ref|XP_001362965.1| PREDICTED: simila (1036) 2075 448.9 6.8e-123 gi|73988105|ref|XP_542286.2| PREDICTED: similar to (1072) 1864 404.3 1.9e-109 gi|109459079|ref|XP_238899.4| PREDICTED: similar t (1007) 1853 401.9 8.9e-109 gi|149257589|ref|XP_891616.2| PREDICTED: ubiquitin (1009) 1848 400.9 1.8e-108 gi|210104335|gb|EEA52359.1| hypothetical protein B ( 972) 1838 398.7 7.8e-108 gi|46577708|sp|Q9P2H5.2|UBP35_HUMAN RecName: Full= (1017) 1838 398.8 8e-108 gi|148746183|ref|NP_065849.1| ubiquitin specific p (1018) 1836 398.3 1.1e-107 gi|194679551|ref|XP_001252407.2| PREDICTED: simila ( 464) 1540 335.5 4e-89 gi|210102534|gb|EEA50582.1| hypothetical protein B ( 797) 1516 330.6 2.1e-87 gi|115752506|ref|XP_001178896.1| PREDICTED: hypoth (1119) 1484 324.0 2.9e-85 gi|156219890|gb|EDO40765.1| predicted protein [Nem ( 981) 1439 314.4 1.9e-82 gi|47217343|emb|CAG11048.1| unnamed protein produc ( 735) 1432 312.8 4.3e-82 gi|21750149|dbj|BAC03730.1| unnamed protein produc ( 422) 1383 302.3 3.7e-79 gi|198415949|ref|XP_002124170.1| PREDICTED: simila ( 934) 1166 256.7 4.3e-65 gi|148668864|gb|EDL01032.1| mCG129167 [Mus musculu ( 587) 1142 251.4 1e-63 gi|168278867|dbj|BAG11313.1| ubiquitin carboxyl-te ( 749) 1134 249.8 4e-63 gi|119595462|gb|EAW75056.1| hCG27473 [Homo sapiens ( 749) 1134 249.8 4e-63 gi|193787475|dbj|BAG52681.1| unnamed protein produ ( 169) 1004 221.9 2.4e-55 >>gi|38503388|sp|Q8BW70.2|UBP38_MOUSE RecName: Full=Ubiq (1042 aa) initn: 6893 init1: 6893 opt: 6893 Z-score: 7866.8 bits: 1467.3 E(): 0 Smith-Waterman score: 6893; 99.712% identity (99.904% similar) in 1042 aa overlap (45-1086:1-1042) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::::::::::::: gi|385 MDKILEGLVSSSHPLPLKRMIVRKVVEFAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES 640 650 660 670 680 690 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 SSVPEESAKILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK 700 710 720 730 740 750 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD 760 770 780 790 800 810 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES 820 830 840 850 860 870 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ 880 890 900 910 920 930 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::::::::: :::::::::.:::::::::::::::::::::::: gi|385 KITSRFPKDTAYVLLYKKQSRANGIDSDNPASGVWANGDPPLQKELMDAITKDNKLYLQE 940 950 960 970 980 990 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 1000 1010 1020 1030 1040 >>gi|26342456|dbj|BAC34890.1| unnamed protein product [M (1042 aa) initn: 6888 init1: 6888 opt: 6888 Z-score: 7861.1 bits: 1466.2 E(): 0 Smith-Waterman score: 6888; 99.616% identity (99.904% similar) in 1042 aa overlap (45-1086:1-1042) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::::::::::::: gi|263 MDKILEGLVSSSHPLPLKRMIVRKVVEFAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|263 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSEAGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES 640 650 660 670 680 690 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SSVPEESAKILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK 700 710 720 730 740 750 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD 760 770 780 790 800 810 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES 820 830 840 850 860 870 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ 880 890 900 910 920 930 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::::::::: :::::::::.:::::::::::::::::::::::: gi|263 KITSRFPKDTAYVLLYKKQSRANGIDSDNPASGVWANGDPPLQKELMDAITKDNKLYLQE 940 950 960 970 980 990 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 1000 1010 1020 1030 1040 >>gi|26344009|dbj|BAC35661.1| unnamed protein product [M (1042 aa) initn: 6887 init1: 6887 opt: 6887 Z-score: 7859.9 bits: 1466.0 E(): 0 Smith-Waterman score: 6887; 99.616% identity (99.904% similar) in 1042 aa overlap (45-1086:1-1042) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::::::::::::: gi|263 MDKILEGLVSSSHPLPLKRMIVRKVVEFAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|263 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLH 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES 640 650 660 670 680 690 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SSVPEESAKILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK 700 710 720 730 740 750 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD 760 770 780 790 800 810 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES 820 830 840 850 860 870 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ 880 890 900 910 920 930 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::::::::: :::::::::.:::::::::::::::::::::::: gi|263 KITSRFPKDTAYVLLYKKQSRANGIDSDNPASGVWANGDPPLQKELMDAITKDNKLYLQE 940 950 960 970 980 990 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 1000 1010 1020 1030 1040 >>gi|109075765|ref|XP_001092815.1| PREDICTED: similar to (1041 aa) initn: 6345 init1: 3955 opt: 6347 Z-score: 7243.0 bits: 1351.9 E(): 0 Smith-Waterman score: 6347; 90.787% identity (97.409% similar) in 1042 aa overlap (45-1086:1-1041) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::.::::::: :: gi|109 MDKILEGLVSSSHPLPLKRVIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|109 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLH 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|109 QGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::.::::::.::::::::::::::::::::.:::::::::::::.:::::::::: gi|109 LTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQERELREYVSQVTKVSNLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::.::::.:::::::..::::::::::::::::.::::::::: gi|109 LAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKNDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|109 FPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.::::::::: :.:.:: ::::.::.: gi|109 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQSSHKPSEILECSETSLQEVASKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS : ::.: : :::::::::::::::::::::::: :::.::::::::::::::: :.:..: gi|109 VLTETPRTTDSEKTLIEKMFGGKLRTHICCLNCRSTSQKVEAFTDLSLAFCPS-SLENMS 580 590 600 610 620 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES ::: :: ::.:: ::::... .: ::::::::.::::.::::::.:..:::: ::.:.:. gi|109 FQDPASSPSTQDGGLMQAAIPSPSEEPVVYNPTTAAFICDSVVNERTIGSPPNEFYCSEN 630 640 650 660 670 680 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK .:::.:: :::..:::::.::::.: :::::::::::::.:::.::::::.::::::::: gi|109 TSVPNESNRILVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 690 700 710 720 730 740 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::::.::::::.::::: gi|109 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTTSFSSLSESWSVD 750 760 770 780 790 800 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::..::: ::::::::.:: : :::::::::::::::.::::::::::::::::::: gi|109 VDFTDLSENLAKKLKPSGTDEASCTKLVPYLLSSVVVHSGISSESGHYYSYARNITGTES 810 820 830 840 850 860 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::. :::.:::: ::: ::: :::..:.::::::::::.::::::::::::::::::: gi|109 SYQIYHQSEALALASSQSHLLGRESPSAVFEQDLENKEMSKEWFLFNDSRVTFTSFQSVQ 870 880 890 900 910 920 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::: .::....::.::.:.:::::::::::::::::::::::: gi|109 KITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDPPLQKELMDAITKDNKLYLQE 930 940 950 960 970 980 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 990 1000 1010 1020 1030 1040 >>gi|38372866|sp|Q8NB14.2|UBP38_HUMAN RecName: Full=Ubiq (1042 aa) initn: 6298 init1: 6298 opt: 6298 Z-score: 7187.0 bits: 1341.5 E(): 0 Smith-Waterman score: 6298; 90.019% identity (97.025% similar) in 1042 aa overlap (45-1086:1-1042) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::.::::::: :: gi|383 MDKILEGLVSSSHPLPLKRVIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|383 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLH 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|383 QGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::.::::::.::::::::::::::::::::.:::::::::::::.:::::::::: gi|383 LTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQERELREYVSQVTKVSNLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|383 ATLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|383 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::.::::.:::::::..::::::::::::::::.::::::::: gi|383 LAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKNDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|383 FPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::: gi|383 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.::.:::::: :.:.:: ::::.::.: gi|383 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSETSLQEVASKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS : ::.: :.:.::::::::::::::::: :::: :::.::::::::::::::: :.:..: gi|383 VLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSSLENMS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES :: :: :: :: ::::.:: : ::::::::.::::.:::.::....:::: ::.:.:. gi|383 VQDPASSPSIQDGGLMQASVPGPSEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSEN 640 650 660 670 680 690 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK .:::.:: .::..:::::.::::.: :::::::::::::.:::.::::::.::::::::: gi|383 TSVPNESNKILVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 700 710 720 730 740 750 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::: .::::::.::::: gi|383 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRITSFSSLSESWSVD 760 770 780 790 800 810 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::..::: ::::::::.:: : :::::::::::::::.:::::::::::::::.:.: gi|383 VDFTDLSENLAKKLKPSGTDEASCTKLVPYLLSSVVVHSGISSESGHYYSYARNITSTDS 820 830 840 850 860 870 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::: :::.:::: ::: ::: .::..:.::::::::::.::::::::::::::::::: gi|383 SYQMYHQSEALALASSQSHLLGRDSPSAVFEQDLENKEMSKEWFLFNDSRVTFTSFQSVQ 880 890 900 910 920 930 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::: .::....::.::.:.:::::::::::::::::::::::: gi|383 KITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDPPLQKELMDAITKDNKLYLQE 940 950 960 970 980 990 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|383 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 1000 1010 1020 1030 1040 >>gi|114596187|ref|XP_517457.2| PREDICTED: hypothetical (1042 aa) initn: 6286 init1: 6286 opt: 6286 Z-score: 7173.3 bits: 1339.0 E(): 0 Smith-Waterman score: 6286; 89.827% identity (97.025% similar) in 1042 aa overlap (45-1086:1-1042) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::.::::::: :: gi|114 MDKILEGLVSSSHPLPLKRVIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|114 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLH 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|114 QGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::.::::::.::::::::::::::::::::.:::::::::::::.:::::::::: gi|114 LTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQERELREYVSQVTKVSNLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ATLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::.::::.::::.::..::::::::::::::::.::::::::: gi|114 LAVLSHMLLSFQHSPEAFHLIVPHVVNLVYSFKNDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|114 FPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::: gi|114 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.::.:::::: :.:.:: ::::.::.: gi|114 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSETSLQEVASKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS : ::.: :.:.::::::::::::::::: :::: :::.::::::::::::::: :.:..: gi|114 VLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSSLENMS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES :: :: :: :: ::::.:: : ::::::::.::::.:::.::....:::: ::.:.:. gi|114 VQDPASSPSIQDGGLMQASVPGPSEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSEN 640 650 660 670 680 690 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK .:::.:: .::..:::::.::.:.: :::::::::::::.:::.::::::.::::::::: gi|114 TSVPNESNKILVNKDVPQKPGSETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 700 710 720 730 740 750 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::.:::::::: .::::::.::::: gi|114 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPMVLELPVKRITSFSSLSESWSVD 760 770 780 790 800 810 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::..::: ::::::::.:: : :::::::::::::::.:::::::::::::::.:.: gi|114 VDFTDLSENLAKKLKPSGTDEASCTKLVPYLLSSVVVHSGISSESGHYYSYARNITSTDS 820 830 840 850 860 870 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::: :::.:::: ::: ::: .:::.:.::::::::::.::::::::::::::::::: gi|114 SYQMYHQSEALALASSQSHLLGRDSPNAVFEQDLENKEMSKEWFLFNDSRVTFTSFQSVQ 880 890 900 910 920 930 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::: .::....::.::.:.:::::::::::::::::::::::: gi|114 KITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDPPLQKELMDAITKDNKLYLQE 940 950 960 970 980 990 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 1000 1010 1020 1030 1040 >>gi|149698194|ref|XP_001502179.1| PREDICTED: ubiquitin (1041 aa) initn: 6266 init1: 3933 opt: 6268 Z-score: 7152.8 bits: 1335.2 E(): 0 Smith-Waterman score: 6268; 90.019% identity (96.929% similar) in 1042 aa overlap (45-1086:1-1041) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE ::::::::::::::: ::::::::::: :: gi|149 MDKILEGLVSSSHPLSLKRMIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HWLDKAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|149 QGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::.::::::.::::::::::::::::::::::::::::::::::.::::::::: gi|149 LTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKAEH 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::.::::.:::::::.:::::::::::::::::.::::::::: gi|149 LAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKSDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::.:::::::::.:::::::::::::::::::::: gi|149 FPDLYEPILEAIKDFPKPSEEKIKLILSQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::: gi|149 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.:::::::::.: :.:: ::::..:.: gi|149 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQSSHKPSESLGCSETSLQEVAGKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS :::: :.:.:::::::::::::::::::::: :::.::::::::::::::: :.:.:: gi|149 FLTESPCTSDGEKTLIEKMFGGKLRTHICCLNCRSTSQKVEAFTDLSLAFCPS-SLENLS 580 590 600 610 620 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES ::: : :..: ::...:: : :: :::::::::::::.::.:..:::: :: :.:. gi|149 FQDPALSPNTQGGGLLRASVPGPSEELGVYNPATAAFVCDSAVNERMVGSPPDEFCCTEN 630 640 650 660 670 680 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK .:::.::..::..::::..::::.: :::::::::::::.:::.::::::.::::::::: gi|149 TSVPNESSKILVNKDVPHKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 690 700 710 720 730 740 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::::.::::::.:::.: gi|149 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTTSFSSLSESWSID 750 760 770 780 790 800 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES ::::::.::: ::::::::::. ::.::::::::::::::.::::::::::::::::.:: gi|149 VDFTDISENLAKKLKPSGTEEVCCPRLVPYLLSSVVVHSGISSESGHYYSYARNITGSES 810 820 830 840 850 860 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::.: :::.:::: :.: ::: .::..::::::::::::.:::::::::::::::.::: gi|149 SYQVCHQSETLALASSRSHLLGRDSPSAVIEQDLENKEMSKEWFLFNDSRVTFTSFHSVQ 870 880 890 900 910 920 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE :::::::::::::::::::. .::....: .::.:::::::::::::::::::::::::: gi|149 KITSRFPKDTAYVLLYKKQNSTNGLSANNSTSGLWVNGDPPLQKELMDAITKDNKLYLQE 930 940 950 960 970 980 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 990 1000 1010 1020 1030 1040 >>gi|151553558|gb|AAI48041.1| USP38 protein [Bos taurus] (1040 aa) initn: 5539 init1: 4131 opt: 6186 Z-score: 7059.1 bits: 1317.9 E(): 0 Smith-Waterman score: 6186; 88.964% identity (96.353% similar) in 1042 aa overlap (45-1086:1-1040) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::.::::::: :: gi|151 MDKILEGLVSSSHPLPLKRVIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::.:::::::.::::::::::::::::::::::::::::::::::::: :::::::: gi|151 QGYHSLDRKDVAIVDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::.::::::.::::::::::::::::::::::::::::::::::.:::::::::: gi|151 LTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :.:::::::::::::::::.::::.:::::::.:::::::::::::::::.::::::::: gi|151 LTVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKSDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|151 FPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::: gi|151 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.:::::: ::. :.:: ::::..:.: gi|151 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQSSHKSSESPGCSETSLQEVANKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS : ::. :.:.:::::::::::::::::::::: :::.::::::::::::::: :.:.:: gi|151 VLTETHCTSDGEKTLIEKMFGGKLRTHICCLNCRSTSQKVEAFTDLSLAFCPSSSMENLS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES ::: :: ::.::::: :.: : .:: : : ...:..:::.::.:.. :: :: :.:. gi|151 FQDPASSPSTQDDGLTQASGPGPSKEPGVCNASAVAIACDSAVNERMVDSPD-EFCCTED 640 650 660 670 680 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK .:::..:...:..:::::.::::.: :::::::::::::.:::.::::::.::::::::: gi|151 TSVPNDSSKMLVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 690 700 710 720 730 740 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD ::::::::::::::::::::::::::::::::::::::::::::::: :::::.:::.: gi|151 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTP-FSSLSESWSLD 750 760 770 780 790 800 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES ::::::.::: ::::::::::: ::::::::::::::::::::::::::::::.::::: gi|151 VDFTDISENLAKKLKPSGTEEACSPKLVPYLLSSVVVHSGVSSESGHYYSYARNVTGTES 810 820 830 840 850 860 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ : ::::: :.::.. :.. ::: :::..:::::::::.::.::::::::::::::::::: gi|151 SCQMCPQPETLAFSSSRNHLLGRESPTVVIEQDLENKDMSKEWFLFNDSRVTFTSFQSVQ 870 880 890 900 910 920 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE :::::::::::::::::.:. .::....: ..:.:::::::::::::::::::::::::: gi|151 KITSRFPKDTAYVLLYKRQNSTNGLNGNNSTTGLWVNGDPPLQKELMDAITKDNKLYLQE 930 940 950 960 970 980 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 990 1000 1010 1020 1030 1040 >>gi|73983882|ref|XP_533279.2| PREDICTED: similar to ubi (1037 aa) initn: 3867 init1: 3833 opt: 6009 Z-score: 6856.9 bits: 1280.4 E(): 0 Smith-Waterman score: 6009; 86.084% identity (94.914% similar) in 1042 aa overlap (45-1086:1-1037) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::.::::::: :: gi|739 MDKILEGLVSSSHPLPLKRVIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ ::: ::::::: ::::::::: :::.::::.:::::::::::::::.::.. :: :::. gi|739 LWLDGAQCEAMFGLTTRLILEGPDPFRRQVGRQVLEAYARYHRPEFEAFFSRPFVQGLLR 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL ::: :. .:::::::.::::.:. :::::::::.::..:: ::.:::: : :::::::: gi|739 QGYGSLGGQDVAILDYVHNGLRLLRSCPSVLDLFGLLRLEVPRMLCERPGPPLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP : ::.::.:.:. .:.::::::::.:::::.::::.::::::::::.:. :::.:::::: gi|739 LGDFAQCIPRGQPAVAFCQQLVRTMGHFQCASTQERELREYVSQVTRVGGLLQSIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA :.:::::::::::.:.::.::::::::::::::::::::::::::::::::::::::::: gi|739 SALLPSLQEVFASLSATDTSFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::.::::.:::::::.:::::::::::::::::.::::::::: gi|739 LAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKSDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|739 FPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.::::::::::::::::::::::::::::::::::::::.::: gi|739 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRVFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.:::::::::.: : :: ::::.::.: gi|739 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQSSHKPSESLGCNETSLQEVASKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS : ::.: :.:.:::::: ::::::::::::::: :::.::::::::::::::: :::.:: gi|739 VLTENPCTSDGEKTLIETMFGGKLRTHICCLNCRSTSQKVEAFTDLSLAFCPSSSVENLS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES ::: :: :..:: :: :... : ::: :::::.:::..:.:. :::: :: :.:. gi|739 FQDPASSPNTQDGGLTQANAPGPAEEP-----ATAAFICDSAMNERMSGSPPDEFCCTEN 640 650 660 670 680 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK . ::.::..::..:::::.::: :: :::::::::::::.:::.::::::.::::::::: gi|739 TCVPNESSKILVNKDVPQKPGGGSTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 690 700 710 720 730 740 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD ::.::::::::::::::::::::::::::::::::::::::::::::.::::::.:::.: gi|739 TMHITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTTSFSSLSESWSID 750 760 770 780 790 800 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES ::::::.::: ::::::::::: : .::::::.::::::::::::::::::::::::::: gi|739 VDFTDISENLAKKLKPSGTEEACCSRLVPYLLNSVVVHSGVSSESGHYYSYARNITGTES 810 820 830 840 850 860 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ ::::: :::.:::: ::: ::: .:::.:::::::.::::.::::::::::::::::::: gi|739 SYQMCHQSETLALASSQSHLLGRNSPNAVIEQDLETKEMSKEWFLFNDSRVTFTSFQSVQ 870 880 890 900 910 920 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE :::::::::::::::::::. .::... . .::.:::::::::::::::::::::::::: gi|739 KITSRFPKDTAYVLLYKKQNSTNGLSGKSSTSGLWVNGDPPLQKELMDAITKDNKLYLQE 930 940 950 960 970 980 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF 990 1000 1010 1020 1030 >>gi|73909113|gb|AAH39115.1| USP38 protein [Homo sapiens (1004 aa) initn: 5921 init1: 5921 opt: 5921 Z-score: 6756.6 bits: 1261.8 E(): 0 Smith-Waterman score: 5921; 89.484% identity (96.866% similar) in 989 aa overlap (45-1033:1-989) 20 30 40 50 60 70 mKIAA1 SSSPPGRFAAPRGCRCQLFIPRAWPCRVATMDKILEGLVSSSHPLPLKRMIVRKVVEFAE :::::::::::::::::::.::::::: :: gi|739 MDKILEGLVSSSHPLPLKRVIVRKVVESAE 10 20 30 80 90 100 110 120 130 mKIAA1 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|739 HWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLH 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 QGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDL :::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|739 QGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 LTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEP :::::::.::::::.::::::::::::::::::::.:::::::::::::.:::::::::: gi|739 LTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQERELREYVSQVTKVSNLLQNIWKAEP 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 STLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ATLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 LAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSG :::::::::::::::::::.::::.:::::::..::::::::::::::::.::::::::: gi|739 LAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKNDGLPSSTAFLVQLTELIHCMMYHYSG 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 FPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINL :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|739 FPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINL 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 GNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE :::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::: gi|739 GNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFE 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA1 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVA :::::::::::::::::::::::::::::::::.::.:::::: :.:.:: ::::.::.: gi|739 ASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSETSLQEVASKAA 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA1 VPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLS : ::.: :.:.::::::::::::::::: :::: :::.::::::::::::::: :.:..: gi|739 VLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSSLENMS 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA1 FQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAES :: :: :: :: ::::.:: : ::::::::.::::.:::.::....:::: ::.:.:. gi|739 VQDPASSPSIQDGGLMQASVPGPSEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSEN 640 650 660 670 680 690 740 750 760 770 780 790 mKIAA1 SSVPEESARILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEK .:::.:: .::..:::::.::::.: :::::::::::::.:::.::::::.::::::::: gi|739 TSVPNESNKILVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEK 700 710 720 730 740 750 800 810 820 830 840 850 mKIAA1 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVD :::::::::::::::::::::::::::::::::::::::::::::: .::::::.::::: gi|739 TMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRITSFSSLSESWSVD 760 770 780 790 800 810 860 870 880 890 900 910 mKIAA1 VDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTES :::::..::: ::::::::.:: : :::::::::::::::.:::::::::::::::.:.: gi|739 VDFTDLSENLAKKLKPSGTDEASCTKLVPYLLSSVVVHSGISSESGHYYSYARNITSTDS 820 830 840 850 860 870 920 930 940 950 960 970 mKIAA1 SYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQ :::: :::.:::: ::: ::: .::..:.::::::::::.::::::::::::::::::: gi|739 SYQMYHQSEALALASSQSHLLGRDSPSAVFEQDLENKEMSKEWFLFNDSRVTFTSFQSVQ 880 890 900 910 920 930 980 990 1000 1010 1020 1030 mKIAA1 KITSRFPKDTAYVLLYKKQSRANGIGSDNPASGVWVNGDPPLQKELMDAITKDNKLYLQE ::::::::::::::::::: .::....::.::.:.::::::::::::::::::::::: gi|739 KITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDPPLQKELMDAITKDNKLYLQV 940 950 960 970 980 990 1040 1050 1060 1070 1080 mKIAA1 QELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF gi|739 SWKYKLYLLKILNN 1000 1086 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 07:15:55 2009 done: Mon Mar 16 07:25:00 2009 Total Scan time: 1186.270 Total Display time: 0.650 Function used was FASTA [version 34.26.5 April 26, 2007]