FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0172.ptfa, 934 aa vs ./tmplib.26680 library 1768083 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.2622+/-0.00479; mu= 4.1334+/- 0.316 mean_var=167.7091+/-39.765, 0's: 0 Z-trim: 22 B-trim: 4 in 1/35 Lambda= 0.0990 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1518 ( 587 res) mej02266 ( 587) 1043 162 2.5e-40 mKIAA1223 ( 600 res) mfj51380 ( 600) 281 53 1.5e-07 mKIAA0379 ( 377 res) mtj01105 ( 377) 229 45 1.8e-05 mFLJ00246 ( 1454 res) mpm02140 (1454) 237 47 2.2e-05 mKIAA1977 ( 649 res) mph01546 ( 649) 213 43 0.00013 mKIAA1728 ( 1313 res) mbg03474 (1313) 215 44 0.00018 mKIAA1306 ( 1347 res) mbg04314 (1347) 210 43 0.0003 mFLJ00040 ( 638 res) mpm09196 ( 638) 192 40 0.0011 mKIAA1981 ( 296 res) mic06024 ( 296) 186 39 0.0011 mKIAA0041 ( 807 res) mbg03660 ( 807) 189 40 0.0017 mKIAA1334 ( 992 res) mpm09174 ( 992) 188 40 0.0021 mKIAA1785 ( 617 res) mph01357 ( 617) 182 39 0.0028 mKIAA0957 ( 713 res) mfj01140 ( 713) 183 39 0.0028 mKIAA1716 ( 277 res) mbj00321 ( 277) 174 37 0.0034 mKIAA1139 ( 1224 res) mpg00286 (1224) 183 39 0.0041 mKIAA1250 ( 1693 res) mbg07525 (1693) 185 40 0.0042 mKIAA0396 ( 474 res) mbg02345 ( 474) 172 37 0.0062 mKIAA1148 ( 1589 res) mfj27189 (1589) 179 39 0.0074 >>mKIAA1518 ( 587 res) mej02266 (587 aa) initn: 1191 init1: 905 opt: 1043 Z-score: 816.4 bits: 161.7 E(): 2.5e-40 Smith-Waterman score: 1049; 42.206% identity (44.898% ungapped) in 417 aa overlap (500-914:180-573) 470 480 490 500 510 520 mKIAA0 FQKASLGKTTGNHLEYTCKCGGLRSGGLLNVQPSQPEVEAETAEGKHSRGHEQFPMQGST ::: .: :. . :. : : mKIAA1 KISITERSCTGAPRMTEPSSVNPRPAAASVVQPENPVPAAQDTTDKK-------P----T 150 160 170 180 190 530 540 550 560 570 580 mKIAA0 LPPVNLTDDQIATGLYVCPNNENTLKSIMKKSDGNKDSNGAKKNLQFIGINGGYETTSSD : . :.: : : .. .: . :.. .. . : ..::::.:.:::::. : : mKIAA1 RPAAASQDSQAADG-----AGRASLATKRKEDPADPEVN--QRNLQFVGVNGGYESPSED 200 210 220 230 240 250 590 600 610 620 630 640 mKIAA0 ESSSDGSSSSESDDECDTIGYPPEEEEEEEEKDHDTRGMAEGHHAVNIEGFKSARVEDEV :....: ...: :: . : . : . . ....:: . .. ..: mKIAA1 SSTAENSEHESTENEGPE---PPARVLSPAECPQ-LRPPGAAVATTSLEGPQLSQESQRV 260 270 280 290 300 650 660 670 680 690 700 mKIAA0 QVPECE--PEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTLQHDWFRV .:: :. :: . :..:: ..::: :. ...:.::. ..... .:. ..:.:. mKIAA1 PAPEVASGPDPEE-EIRMDLSPDLISACLALEKYLENPNALTERELKVAYTTVLQEWLRL 310 320 330 340 350 360 710 720 730 740 750 760 mKIAA0 SSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDAD . ...: : .: ....:.:.: .: :..:.::.::::::::::::.:: .:. :::. mKIAA1 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVRQLLDSG 370 380 390 400 410 420 770 780 790 800 810 820 mKIAA0 VCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHG ::.::. :.:::.::::.:::..... :.... .:: :.:::::::::::::::::::: mKIAA1 VCHVDKLNRAGYSPIMLTALATLKTQDDIETILQLFRLGNVNAKASQAGQTALMLAVSHG 430 440 450 460 470 480 830 840 850 860 870 880 mKIAA0 RIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTAL :.:.:..:::: :::::::..:::::::: :::: ::. :::: :.:. : : :::::: mKIAA1 RVDVVRALLACEADVNIQDEDGSTALMCACEHGHKEITGLLLAVPSCDISLTDRDGSTAL 490 500 510 520 530 540 890 900 910 920 930 mKIAA0 SIALEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD .::.::...:: .::...:.. . .: mKIAA1 MVALDAGQSEIASMLYSRMNIKCSFAPMSDYESPASSSAEE 550 560 570 580 >>mKIAA1223 ( 600 res) mfj51380 (600 aa) initn: 355 init1: 177 opt: 281 Z-score: 227.9 bits: 52.8 E(): 1.5e-07 Smith-Waterman score: 281; 33.529% identity (35.404% ungapped) in 170 aa overlap (737-905:79-240) 710 720 730 740 750 760 mKIAA0 VSSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDA :.. .: .::. .. ... .::.::.. mKIAA1 IDNDGRIPFILASQEGHYDCVQILLENKSNIDQRGYDGRNALRVAALEGHRDIVELLFSH 50 60 70 80 90 100 770 780 790 800 810 820 mKIAA0 DVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQA-GQTALMLAVS . .:.... : ... :: :... ..: .. : .:..::.: :.::: .. mKIAA1 GA-DVNYKDADGRPTLYILAL-----ENQLTMAEYFLENG-ANVEASDAEGRTALHVSCW 110 120 130 140 150 160 830 840 850 860 870 880 mKIAA0 HGRIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGST .:...::. :.:: :::: :.: .::. :. .:::..:.::. . . : :.:.: mKIAA1 QGHVEMVRVLIACHADVNAADNEKRSALQSAAWQGHVKVVQLLIEHGAVVDHTC-NQGAT 170 180 190 200 210 220 890 900 910 920 930 mKIAA0 ALSIALEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD :: :: . :: :.. .: : mKIAA1 ALCIAAQEGHVDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASSLNG 230 240 250 260 270 280 >>mKIAA0379 ( 377 res) mtj01105 (377 aa) initn: 311 init1: 138 opt: 229 Z-score: 190.4 bits: 45.2 E(): 1.8e-05 Smith-Waterman score: 231; 29.327% identity (30.964% ungapped) in 208 aa overlap (696-902:36-233) 670 680 690 700 710 720 mKIAA0 ELSEKMLSACNLLKYNIKDPKALASKDMRICLNTLQHDWFRVSSQKSAVPAMVGDYIAAF :: :. . :. . ::. . .: : . mKIAA0 KDKWGRTALHRGAVTGHEECVDALLQHGAKCL--LRDSRGRTPIHLSAACGHIGVLGALL 10 20 30 40 50 60 730 740 750 760 770 780 mKIAA0 E-AVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDADVCNVDHQNKAGYTPIML . :.: :. .. :..: ::::.. ... :.:::. :: . : ...:. mKIAA0 QSATSVDANPAVV---DNHGYTALHWACYNGHETCVELLLEQDVFQKIDGN--AFSPLHC 70 80 90 100 110 790 800 810 820 830 840 mKIAA0 AALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKGLLACGADVNI :.. :. .: . . .. . ::: :. :.: : :. ... .. ::. .:.:: mKIAA0 AVINDNEGAAEMLI--DSLGASIVNATDSK-GRTPLHAAAFTDHVECLQLLLSQNAQVNS 120 130 140 150 160 170 850 860 870 880 890 900 mKIAA0 QDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIALEAGHKDIAVLLYA :. :.: :: :.:.:... :..:... . . :.:.. .::: .: ::. :.:. mKIAA0 ADSTGKTPLMMAAENGQTNTVEMLVSSASADLTLQDKSKNTALHLACGKGHETSALLILE 180 190 200 210 220 230 910 920 930 mKIAA0 HLNFSKAQSPSTPRLGRKTSPGPTHRGSFD mKIAA0 KITDRNLINATNAALQTPLHVAARNGLTMVVQELLGKGASVLAVDENGYTPALACAPNKD 240 250 260 270 280 290 >>mFLJ00246 ( 1454 res) mpm02140 (1454 aa) initn: 293 init1: 162 opt: 237 Z-score: 189.0 bits: 46.9 E(): 2.2e-05 Smith-Waterman score: 294; 35.928% identity (37.736% ungapped) in 167 aa overlap (737-902:300-459) 710 720 730 740 750 760 mKIAA0 VSSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDA .: ...::::: :. . . ..:::.::. mFLJ00 GNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFIDIVKVLLNE 270 280 290 300 310 320 770 780 790 800 810 820 mKIAA0 DVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCG-DVNAKASQAGQTALMLAVS . :.. .:. :.::.: :: :. ..:.. :.. : .:..... ..:: :: mFLJ00 GA-NIEDHNENGHTPLMEAASAG-----HVEVARVLLDHGAGINTHSNEFKESALTLACY 330 340 350 360 370 380 830 840 850 860 870 880 mKIAA0 HGRIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGST .:..:::. :: ::: . . :: :::: : ::::...::: . : . .. .. . mFLJ00 KGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLL-DSGAQVNMPADSFES 390 400 410 420 430 440 890 900 910 920 930 mKIAA0 ALSIALEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD :..: .:: ..:.:: mFLJ00 PLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQ 450 460 470 480 490 500 >>mKIAA1977 ( 649 res) mph01546 (649 aa) initn: 357 init1: 143 opt: 213 Z-score: 175.0 bits: 43.2 E(): 0.00013 Smith-Waterman score: 236; 32.843% identity (35.829% ungapped) in 204 aa overlap (716-918:61-248) 690 700 710 720 730 740 mKIAA0 KALASKDMRICLNTLQHDWFRVSSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGN : .:.. .. : :. : .: .:.: mKIAA1 LLKRSLSMWHGLGAQGSPEELDVPLDLHTAASIGQHEVVKECVQRGELD--LNKKNGGGW 40 50 60 70 80 750 760 770 780 790 800 mKIAA0 TALHYSVSHSNFQIVKLLLDADVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSC ::: :. .. ::.:::.: : .:. . : ::.:::. . :. .. :.. mKIAA1 TALMYASYIGHDTIVHLLLEAGV-SVNVPTPEGQTPLMLASSCGNES-----IAYFLLQQ 90 100 110 120 130 140 810 820 830 840 850 860 mKIAA0 GDVNAKASQAGQTALMLAVSHGRIDMVKGLLACGADVNIQDD-EGSTALMCASEHGHVEI : . : :::. .: :. .::: :: ::..:... : : :: :. :: : mKIAA1 GAELEMKDIHGWTALFHCTSAGHQQMVKFLLESGANANVREPVYGYTPLMEAAASGHEII 150 160 170 180 190 200 870 880 890 900 910 920 mKIAA0 VKLLLAQPGCNGHLEDNDGSTALSIALEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTS :. .: . : . .:..:.:: .: . :: :..:. .: :: :. mKIAA1 VQYFLNH-GVKVDTRDHSGATACMLARQFGHMKIVALMETH-------SPVLPKSLYRSP 210 220 230 240 250 930 mKIAA0 PGPTHRGSFD mKIAA1 EKYEDLSSSDESWPVPQRQRPCQKKGLSIHEGPRALAKITAIGLGGKTQTTYEQVPPRGY 260 270 280 290 300 310 >>mKIAA1728 ( 1313 res) mbg03474 (1313 aa) initn: 367 init1: 140 opt: 215 Z-score: 172.6 bits: 43.7 E(): 0.00018 Smith-Waterman score: 215; 29.091% identity (30.380% ungapped) in 165 aa overlap (737-895:448-611) 710 720 730 740 750 760 mKIAA0 VSSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDA .. : .:. :: .:. ... .:.. ::. mKIAA1 MSENGMNALCYAAAAGHMKLVCLLIKKGARVDHLDKKGQCALVHSALRGHSDILQYLLNC 420 430 440 450 460 470 770 780 790 800 810 820 mKIAA0 DVCNVDHQ-NKAGYTPIMLAALAAVEAEKDMQVVEELFSCG-----DVNAKASQAGQTAL . : . . . ::.:. . .::. :.. . .::. . :.::: mKIAA1 EWSAGPPQPGTLRKSQALQQALTAAASMGHSSVVQSLLGMAEEHEIEVNGTDTLWGETAL 480 490 500 510 520 530 830 840 850 860 870 880 mKIAA0 MLAVSHGRIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLED :...:.... . :: :: :. . .: :.::...:: ..:.::: . ::. .: : mKIAA1 TAAAGRGKVEICELLLERGAAVSRANRRGVPPLFCAARQGHWQVVRLLLDR-GCDVNLSD 540 550 560 570 580 590 890 900 910 920 930 mKIAA0 NDGSTALSIALEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD ..: : : .: :: mKIAA1 KQGRTPLMVASCEGHLSTVEFLLSKGAALSSLDKEGLSALSWACLKGHRAVVQYLVEEGA 600 610 620 630 640 650 >>mKIAA1306 ( 1347 res) mbg04314 (1347 aa) initn: 268 init1: 125 opt: 210 Z-score: 168.6 bits: 43.0 E(): 0.0003 Smith-Waterman score: 259; 30.500% identity (32.973% ungapped) in 200 aa overlap (737-928:29-221) 710 720 730 740 750 760 mKIAA0 VSSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDA .:. : .: .:::... ..: ....:::.: mKIAA1 EDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNGNTELISLLLEA 10 20 30 40 50 770 780 790 800 810 820 mKIAA0 DVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSH .. :: ... :. :. :: . .. :..: .. :.. :. :. : ::..: mKIAA1 QAA-VDIKDNKGMRPLHYAAWQG--RKEPMKLV---LKAGSAVNVPSDEGHIPLHLAAQH 60 70 80 90 100 110 830 840 850 860 870 mKIAA0 GRIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLE------- :. :. . :: .. . :. :.: : : : :.: .:.:::.. : . :: mKIAA1 GHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDTT 120 130 140 150 160 170 880 890 900 910 920 930 mKIAA0 DNDGSTALSIALEAGHKDIA-VLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD : .:.. : .: . :: :: .:: : ..... :. : : . . : :. mKIAA1 DPNGTSPLHLAAKNGHIDIIRLLLQAGIDINR-QTKSGTALHEAALCGKTEVVRLLLDSG 180 190 200 210 220 230 mKIAA1 INAQVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAALQVRATKDYCNNYDLTSLNVK 240 250 260 270 280 290 >>mFLJ00040 ( 638 res) mpm09196 (638 aa) initn: 115 init1: 115 opt: 192 Z-score: 158.9 bits: 40.2 E(): 0.0011 Smith-Waterman score: 192; 31.655% identity (33.083% ungapped) in 139 aa overlap (764-902:319-451) 740 750 760 770 780 790 mKIAA0 RYIINMADGNGNTALHYSVSHSNFQIVKLLLDADVCNVDHQNKAGYTPIMLAALAAVEAE ..:. .:. :. :..:. .::: ... mFLJ00 VEDAISTVDLEFCHPLCQCPKCAPAQKLARISANGLSVNVTNQDGFSPLHMAAL---HGR 290 300 310 320 330 340 800 810 820 830 840 850 mKIAA0 KDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKGLLACGADVNIQDDEGSTAL :. : :.. : .. . . . : :: ..:.....: :: .: : .: :.: : mFLJ00 TDL--VPLLLKHGAYSGARNTSQAVPLHLACQQGHFQVAKCLLDSNAKPNKKDLSGNTPL 350 360 370 380 390 400 860 870 880 890 900 910 mKIAA0 MCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIALEAGHKDIAVLLYAHLNFSKAQS .:: :: :.. ::: : : . . .: :.::: :. . : .. :: mFLJ00 ICACSAGHHEVAALLL-QHGASINACNNKGNTALHEAVMGRHTLVVELLLFYGASVDILN 410 420 430 440 450 460 920 930 mKIAA0 PSTPRLGRKTSPGPTHRGSFD mFLJ00 KRQYTAADCAEQDSKIMELLQVVPGCVASLDSVEEADHEGYVTVEIRRKWNPKMYNLPEE 470 480 490 500 510 520 >>mKIAA1981 ( 296 res) mic06024 (296 aa) initn: 136 init1: 136 opt: 186 Z-score: 158.5 bits: 39.0 E(): 0.0011 Smith-Waterman score: 219; 29.843% identity (31.492% ungapped) in 191 aa overlap (741-931:112-292) 720 730 740 750 760 770 mKIAA0 KSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDADVCN :: : .::: ...... . .: ::.:. : mKIAA1 GKSAFHLAAMRGAAGCLEVMLAQGADVMSTDGAGYNALHLAAKYGHPECLKQLLEAS-CV 90 100 110 120 130 140 780 790 800 810 820 830 mKIAA0 VDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRID :: ....:.: . :: .. .. . : : ...: : :..:.. . : mKIAA1 VDIEDSSGWTALHHAAAGGC-----LSCSKLLCSFKAHMNPRDRSGATPLIIAAQMCHTD 150 160 170 180 190 840 850 860 870 880 890 mKIAA0 MVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIA . . :: :: .: :: .: :::: : : : : :..:: : : . . : :. : . mKIAA1 LCRLLLQQGAATNDQDLQGRTALMLACEGGSPETVEVLL-QGGAQLSITDALGQDATHYG 200 210 220 230 240 250 900 910 920 930 mKIAA0 LEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD .: : : ::. .. .:: . : . .. . .. : mKIAA1 ALTGDKLILQLLHES---ARRSSPPSASLEEDSGEASSQVGIRNP 260 270 280 290 >>mKIAA0041 ( 807 res) mbg03660 (807 aa) initn: 159 init1: 93 opt: 189 Z-score: 155.2 bits: 39.8 E(): 0.0017 Smith-Waterman score: 189; 38.983% identity (40.351% ungapped) in 118 aa overlap (793-907:645-761) 770 780 790 800 810 820 mKIAA0 LLDADVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCG-DVNAKASQAGQ-TAL ::.. . : .. : ::: :. .: : : mKIAA0 YEPEGERQESSVFLDSKHLNPGLQLYRASYEKNLPKMAEALAHGADVNWANSDENQATPL 620 630 640 650 660 670 830 840 850 860 870 880 mKIAA0 MLAVSHGRIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLED . :: : . . :: ::.:: .: .: : :. ::. : :.: . : : : : mKIAA0 IQAVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKR-GANQHATD 680 690 700 710 720 730 890 900 910 920 930 mKIAA0 NDGSTALSIALEAGHKDIAVLLY-AHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD ..:. ::::.::.. ::..:: :..: mKIAA0 EEGKDPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDETYQDIFRDFSQMASNN 740 750 760 770 780 790 934 residues in 1 query sequences 1768083 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:13:46 2006 done: Mon Mar 27 10:13:47 2006 Scan time: 0.990 Display time: 0.260 Function used was FASTA [version 3.4t11 Apr 17, 2002]