# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh02469.fasta.nr -Q ../query/mKIAA0723.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0723, 852 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915867 sequences Expectation_n fit: rho(ln(x))= 6.1575+/-0.000194; mu= 9.5309+/- 0.011 mean_var=104.8341+/-20.060, 0's: 33 Z-trim: 51 B-trim: 0 in 0/67 Lambda= 0.125263 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|55976533|sp|Q8K310.1|MATR3_MOUSE RecName: Full= ( 846) 5688 1039.0 0 gi|74145585|dbj|BAE36204.1| unnamed protein produc ( 846) 5687 1038.8 0 gi|71059973|emb|CAJ18530.1| Matr3 [Mus musculus] ( 846) 5682 1037.9 0 gi|148664714|gb|EDK97130.1| mCG121979, isoform CRA ( 845) 5670 1035.7 0 gi|60458501|dbj|BAD90681.1| nuclear scaffold prote ( 845) 5630 1028.5 0 gi|12643398|sp|P43244.2|MATR3_RAT RecName: Full=Ma ( 845) 5610 1024.9 0 gi|109078820|ref|XP_001114262.1| PREDICTED: matrin ( 847) 5609 1024.7 0 gi|114602027|ref|XP_001172281.1| PREDICTED: matrin ( 847) 5605 1024.0 0 gi|12643409|sp|P43243.2|MATR3_HUMAN RecName: Full= ( 847) 5600 1023.1 0 gi|55731929|emb|CAH92673.1| hypothetical protein [ ( 847) 5593 1021.8 0 gi|149726298|ref|XP_001504297.1| PREDICTED: simila ( 849) 5588 1020.9 0 gi|51476906|emb|CAH18419.1| hypothetical protein [ ( 847) 5581 1019.6 0 gi|73970932|ref|XP_863994.1| PREDICTED: similar to ( 849) 5564 1016.6 0 gi|114602043|ref|XP_001172249.1| PREDICTED: matrin ( 793) 5226 955.5 0 gi|109078830|ref|XP_001114319.1| PREDICTED: matrin ( 794) 5224 955.1 0 gi|114602041|ref|XP_001172321.1| PREDICTED: matrin ( 794) 5220 954.4 0 gi|126290376|ref|XP_001368342.1| PREDICTED: simila ( 851) 5213 953.1 0 gi|73970938|ref|XP_864056.1| PREDICTED: similar to ( 795) 5190 949.0 0 gi|73970948|ref|XP_864154.1| PREDICTED: similar to ( 796) 5184 947.9 0 gi|109078818|ref|XP_001114241.1| PREDICTED: matrin ( 895) 4736 867.0 0 gi|114602039|ref|XP_001172166.1| PREDICTED: matrin ( 841) 4735 866.8 0 gi|114602023|ref|XP_001172237.1| PREDICTED: matrin ( 895) 4735 866.8 0 gi|114602045|ref|XP_001172140.1| PREDICTED: matrin ( 826) 4734 866.6 0 gi|73970956|ref|XP_864248.1| PREDICTED: similar to ( 856) 4730 865.9 0 gi|134024643|gb|AAI34451.1| MATR3 protein [Bos tau ( 844) 4718 863.7 0 gi|111944|pir||A40016 matrin 3 - rat ( 845) 4708 861.9 0 gi|73970944|ref|XP_531926.2| PREDICTED: similar to ( 897) 4708 861.9 0 gi|73970950|ref|XP_864173.1| PREDICTED: similar to ( 828) 4707 861.7 0 gi|6563246|gb|AAF17217.1|AF117236_1 matrin 3 [Homo ( 848) 4642 850.0 0 gi|74180469|dbj|BAE34177.1| unnamed protein produc ( 650) 4404 806.9 0 gi|149598834|ref|XP_001518090.1| PREDICTED: simila ( 836) 4278 784.2 0 gi|55733482|emb|CAH93419.1| hypothetical protein [ ( 615) 4162 763.1 0 gi|224068398|ref|XP_002187131.1| PREDICTED: matrin ( 850) 4137 758.7 2.3e-216 gi|224068402|ref|XP_002187081.1| PREDICTED: matrin ( 903) 4137 758.7 2.5e-216 gi|17221616|dbj|BAB78469.1| nuclear protein matrin ( 902) 4124 756.4 1.2e-215 gi|114602021|ref|XP_001172261.1| PREDICTED: matrin ( 559) 3557 653.7 6e-185 gi|221046228|dbj|BAH14791.1| unnamed protein produ ( 559) 3552 652.8 1.1e-184 gi|194387940|dbj|BAG61383.1| unnamed protein produ ( 559) 3541 650.8 4.5e-184 gi|73970954|ref|XP_864224.1| PREDICTED: similar to ( 561) 3507 644.7 3.2e-182 gi|148664713|gb|EDK97129.1| mCG121979, isoform CRA ( 508) 3363 618.6 2e-174 gi|197245741|gb|AAI68723.1| Unknown (protein for I ( 491) 3308 608.7 1.9e-171 gi|149017209|gb|EDL76260.1| rCG49469, isoform CRA_ ( 507) 3305 608.2 2.9e-171 gi|193785533|dbj|BAG50899.1| unnamed protein produ ( 509) 3288 605.1 2.4e-170 gi|55728816|emb|CAH91147.1| hypothetical protein [ ( 509) 3285 604.6 3.5e-170 gi|60219493|emb|CAI56758.1| hypothetical protein [ ( 509) 3281 603.8 5.8e-170 gi|194375966|dbj|BAG57327.1| unnamed protein produ ( 509) 3278 603.3 8.5e-170 gi|114602037|ref|XP_001172333.1| PREDICTED: matrin ( 791) 3261 600.4 1e-168 gi|73970952|ref|XP_864197.1| PREDICTED: similar to ( 511) 3244 597.1 6e-168 gi|38328275|gb|AAH62231.1| Matr3 protein [Rattus n ( 403) 2755 508.7 2e-141 gi|148683109|gb|EDL15056.1| mCG132174 [Mus musculu ( 411) 2743 506.5 9.1e-141 >>gi|55976533|sp|Q8K310.1|MATR3_MOUSE RecName: Full=Matr (846 aa) initn: 5688 init1: 5688 opt: 5688 Z-score: 5555.5 bits: 1039.0 E(): 0 Smith-Waterman score: 5688; 100.000% identity (100.000% similar) in 846 aa overlap (7-852:1-846) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN 780 790 800 810 820 830 850 mKIAA0 KLAEERRQKKET :::::::::::: gi|559 KLAEERRQKKET 840 >>gi|74145585|dbj|BAE36204.1| unnamed protein product [M (846 aa) initn: 5687 init1: 5687 opt: 5687 Z-score: 5554.5 bits: 1038.8 E(): 0 Smith-Waterman score: 5687; 99.882% identity (100.000% similar) in 846 aa overlap (7-852:1-846) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|741 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYVLMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN 780 790 800 810 820 830 850 mKIAA0 KLAEERRQKKET :::::::::::: gi|741 KLAEERRQKKET 840 >>gi|71059973|emb|CAJ18530.1| Matr3 [Mus musculus] (846 aa) initn: 5682 init1: 5682 opt: 5682 Z-score: 5549.6 bits: 1037.9 E(): 0 Smith-Waterman score: 5682; 99.882% identity (100.000% similar) in 846 aa overlap (7-852:1-846) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|710 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCREDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN 780 790 800 810 820 830 850 mKIAA0 KLAEERRQKKET :::::::::::: gi|710 KLAEERRQKKET 840 >>gi|148664714|gb|EDK97130.1| mCG121979, isoform CRA_b [ (845 aa) initn: 3614 init1: 3614 opt: 5670 Z-score: 5537.9 bits: 1035.7 E(): 0 Smith-Waterman score: 5670; 99.882% identity (99.882% similar) in 846 aa overlap (7-852:1-845) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ICDLPVHSNK-WSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSYSPDGKESPSDKKSKTDAQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESE 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKLK 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYTI 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLN 780 790 800 810 820 830 850 mKIAA0 KLAEERRQKKET :::::::::::: gi|148 KLAEERRQKKET 840 >>gi|60458501|dbj|BAD90681.1| nuclear scaffold protein P (845 aa) initn: 5121 init1: 4207 opt: 5630 Z-score: 5498.8 bits: 1028.5 E(): 0 Smith-Waterman score: 5630; 99.174% identity (99.646% similar) in 847 aa overlap (7-852:1-845) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 RSYSPDGKESPSDKKSKTD-AQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES ::::::::::::::::::: :::::.:::::::::::::::::::::::::::::::::: gi|604 RSYSPDGKESPSDKKSKTDGAQKTENPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKL ::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|604 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKD--ASATSKKKL 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYT :::::::::::::::::::::::::::::::::::::::::::.:.:.:::::::::::: gi|604 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDASDNSDGQNDENKEDYT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|604 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL 780 790 800 810 820 830 840 850 mKIAA0 NKLAEERRQKKET ::::::::::::: gi|604 NKLAEERRQKKET 840 >>gi|12643398|sp|P43244.2|MATR3_RAT RecName: Full=Matrin (845 aa) initn: 5659 init1: 4201 opt: 5610 Z-score: 5479.3 bits: 1024.9 E(): 0 Smith-Waterman score: 5610; 98.701% identity (99.528% similar) in 847 aa overlap (7-852:1-845) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KRIKKPEGKPDEKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 RSYSPDGKESPSDKKSKTD-AQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES ::::::::::::::::::: :::::.:::::::::::::::::::::::::::::::::: gi|126 RSYSPDGKESPSDKKSKTDGAQKTENPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKL ::::::::::::::.:::::::::::::::::::::::::::::::::: ::::::::: gi|126 EDELLVDEEEAAALIESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKD--ASATSKKKL 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYT :::::::::::::::::::::::::::::::::::::::::::.:.:.:::::::::::: gi|126 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDASDNSDGQNDENKEDYT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|126 IPDEYRIGPYQPNVPGGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL 780 790 800 810 820 830 840 850 mKIAA0 NKLAEERRQKKET ::::::::::::. gi|126 NKLAEERRQKKES 840 >>gi|109078820|ref|XP_001114262.1| PREDICTED: matrin 3 i (847 aa) initn: 4198 init1: 4198 opt: 5609 Z-score: 5478.3 bits: 1024.7 E(): 0 Smith-Waterman score: 5609; 98.583% identity (99.646% similar) in 847 aa overlap (7-852:1-847) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS ::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 MSKSFQQSSLSRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 RSYSPDGKESPSDKKSKTD-AQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES ::::::::::::::::::: .::::: .::::::::::::::::::::::::::.::::: gi|109 RSYSPDGKESPSDKKSKTDGSQKTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLES 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKL :::::::::::::::::::::::::::::::::.::::::::::::::: ::::..:::: gi|109 EDELLVDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDASASAAAKKKL 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYT :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQSDENKEDYT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL 780 790 800 810 820 830 840 850 mKIAA0 NKLAEERRQKKET ::::::::::::: gi|109 NKLAEERRQKKET 840 >>gi|114602027|ref|XP_001172281.1| PREDICTED: matrin 3 i (847 aa) initn: 4198 init1: 4198 opt: 5605 Z-score: 5474.4 bits: 1024.0 E(): 0 Smith-Waterman score: 5605; 98.465% identity (99.646% similar) in 847 aa overlap (7-852:1-847) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS ::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|114 MSKSFQQSSLSRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|114 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 RSYSPDGKESPSDKKSKTD-AQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES ::::::::::::::::::: .::::: .::::::::::::::::::::::::::.::::: gi|114 RSYSPDGKESPSDKKSKTDGSQKTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLES 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKL :::::::::::::::::::::::::::::::::.::::::::::::::: ::::..:::: gi|114 EDELLVDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDGSASAAAKKKL 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYT :::::.:::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|114 KKVDKMEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQSDENKEDYT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL 780 790 800 810 820 830 840 850 mKIAA0 NKLAEERRQKKET ::::::::::::: gi|114 NKLAEERRQKKET 840 >>gi|12643409|sp|P43243.2|MATR3_HUMAN RecName: Full=Matr (847 aa) initn: 4198 init1: 4198 opt: 5600 Z-score: 5469.5 bits: 1023.1 E(): 0 Smith-Waterman score: 5600; 98.347% identity (99.646% similar) in 847 aa overlap (7-852:1-847) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS ::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|126 MSKSFQQSSLSRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|126 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 RSYSPDGKESPSDKKSKTD-AQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES ::::::::::::::::::: .::::: .::::::::::::::::::::::::::.::::: gi|126 RSYSPDGKESPSDKKSKTDGSQKTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLES 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKL :::::::::::::::::::::::::::::::::.::::::::::::::: ::::..:::: gi|126 EDELLVDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDGSASAAAKKKL 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYT :::::::::::::::::::::::::::::::::.:::::::::::::::::.::::.::: gi|126 KKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL 780 790 800 810 820 830 840 850 mKIAA0 NKLAEERRQKKET ::::::::::::: gi|126 NKLAEERRQKKET 840 >>gi|55731929|emb|CAH92673.1| hypothetical protein [Pong (847 aa) initn: 4187 init1: 4187 opt: 5593 Z-score: 5462.7 bits: 1021.8 E(): 0 Smith-Waterman score: 5593; 98.229% identity (99.646% similar) in 847 aa overlap (7-852:1-847) 10 20 30 40 50 60 mKIAA0 TRDSSTMSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS ::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|557 MSKSFQQSSLSRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLAS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILAS ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|557 LMNLGMSSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILAS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 FGLSARDLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 RDDWEEKRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 FFGETSHNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 ICDLPVHSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|557 ICDLPVHSNKEWSRHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQ ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|557 ILGPPPPSFHLGGPAVGPRGNLGAGNGNLQGPRHMQEGRVETSRVVHIMDFQRGKNLRYQ 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 KRIKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQ 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRK 540 550 560 570 580 590 610 620 630 640 650 mKIAA0 RSYSPDGKESPSDKKSKTD-AQKTESPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLES ::::::::::::::::::: .::::: .::::::::::::::::::::::::::.::::: gi|557 RSYSPDGKESPSDKKSKTDGSQKTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLES 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 EDELLVDEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDPSASATSKKKL :::::::::::::::::::::::::::::::::.::::::::::::::: ::::..:::: gi|557 EDELLVDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDASASAAAKKKL 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 KKVDKIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQNDENKEDYT ::::::::::::::::::::::::::::::.::::::::::::::::::::.:::::::: gi|557 KKVDKIEELDQENEAALENGIKNEENTEPGTESAENADDPNKDTSENADGQSDENKEDYT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 IPDEYRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFL 780 790 800 810 820 830 840 850 mKIAA0 NKLAEERRQKKET ::::::::::::: gi|557 NKLAEERRQKKET 840 852 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 02:56:44 2009 done: Mon Mar 16 03:05:21 2009 Total Scan time: 1130.310 Total Display time: 0.420 Function used was FASTA [version 34.26.5 April 26, 2007]