FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1102.ptfa, 785 aa vs ./tmplib.26680 library 1768232 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.3829+/-0.00692; mu= -1.7011+/- 0.459 mean_var=318.5642+/-74.492, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0719 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0858 ( 1625 res) mbg02428 (1625) 338 49 4.5e-06 >>mKIAA0858 ( 1625 res) mbg02428 (1625 aa) initn: 594 init1: 311 opt: 338 Z-score: 201.5 bits: 49.1 E(): 4.5e-06 Smith-Waterman score: 499; 26.194% identity (34.411% ungapped) in 691 aa overlap (53-600:589-1257) 30 40 50 60 70 80 mKIAA1 RKSWSTATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLIN : :: :. :. : ..: :..: :. mKIAA0 WEAIWEASRLRHRKRLMVERLFQKIYGENGSKSMSDVSAED---VQNLRQVRYEEMQKIK 560 570 580 590 600 610 90 100 110 120 130 140 mKIAA1 NQLREEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYRE .::.:.:.:::::::.::.::.: ..:: ::.:::...:: .. . .: ::.:: mKIAA0 SQLKEQDQKWQDDLAKWKNRRKSYTSDLQKKKEEREEIEK-----QALEKSDRSSKTFRE 620 630 640 650 660 670 150 160 170 180 mKIAA1 IVQEKERRERELHEAYKNARSQEEA--EGILQQYIERFTISEAVL--ERLE--------- ..:..: : . ... . :... .:.: . :.::. :::: mKIAA0 MLQDRESRGSTV-TSWRRTYSSDDILDDGVLPPTV---TLSETSYQSERLEDEARAHPAE 680 690 700 710 720 190 200 210 mKIAA1 MPK-------------ILER---SHSTE-----PNVSSFPNDPS---------PMKYLRQ ::: . : ::: : :. : : . : :. . mKIAA0 MPKEDSTTFANREDSVVAETQLASHSPEEQRLAPSPSEEPRQASGSSAEPHQAPLLSTEP 730 740 750 760 770 780 220 230 240 250 260 mKIAA1 QSLPPPK---FTATVETTIARTSVPESIASAGTGSPSKIIT---PNT---------VPML . : :. :.. .:. : : : : .: . : :. : . . .. mKIAA0 RRTPLPSEEPHQASLSSTLQRPSSLSSQQSWSTRAESTRISASLPRSYQRTDTARLTSVV 790 800 810 820 830 840 270 280 290 300 310 320 mKIAA1 TPRPY-SQPKNSQEVLKTFKVDGKVSMNGEMAPGDEEGKEKEGPAAAAPGPSLTKSQMFE : ::. .. .. . . ... .: ..::.. : :... . : ::. .:... mKIAA0 TARPFGTSSRGISSLPRSYTMDDGWKYNGDV----EVVKREQLDLGRATGPKPDSSHFIS 850 860 870 880 890 900 330 340 350 360 mKIAA1 G------------VATVHDSPVQVKQGSNSIEINIKKPNSAPQELTAASEETESNGQE-- : ::.. . . .. :.. .. : :. . : ..:. :. :. mKIAA0 GSASEKEVIATEDVASLSSPTLPSSSLSHDRAVSSKATFSSMSGLDSVSDSGEGRGSPLR 910 920 930 940 950 960 370 380 390 400 mKIAA1 ------DEDGEER------PGTGDLEPDSAE---PQHFTTTVTRCSPT------------ :. .. : ::. . . . :...: . ::. mKIAA0 EVSRSLDQFSDMRVSINQTPGNKPVFGFTIKWDISGIFVASVEQGSPAEFSQLQVDDEIL 970 980 990 1000 1010 1020 410 420 430 mKIAA1 -VALVEFS-----------SNPQ----LKNEVPEQGQK-----KPEDEMSG--------- . ..:: .: : : .: . :.. : : :: mKIAA0 AINNTKFSYKDTKKWEEVMANAQETGNLVMDVRRYGKSGSSETKWIDTTSGIYNSDKSSS 1030 1040 1050 1060 1070 1080 440 450 460 470 mKIAA1 -KVELVLSQKVAKPKSPEPEAT----LTFPFLDKMPETNQLH--------LPNPSSQADS .: .:... .: . :.. . :: .: :. .:. . . ::.. . mKIAA0 LSVTTDFSESLQSPYTESKEVNGIHEESNPFDSKASESISLKNLKRRSQFFEQGSSDSVA 1090 1100 1110 1120 1130 1140 480 490 500 510 520 530 mKIAA1 PSSEKSPGSTPFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVE :. :.: . :::: ::::::::.::.::.:::::.::.::.::.:::..::.:.: mKIAA0 PDLPVPTLSAPSR-WAWDQEEERRRQERWQKEQDRLLQEKYQREQEKLREEWQRAQQEAE 1150 1160 1170 1180 1190 1200 540 550 560 570 580 590 mKIAA1 EEERRYYEEERKIIEDTVVPFTISSSSADQLSTSLSVTEGSGTRNKMDLENCPDKENERR .:. .: .:: ..... .:: .: . .... .: . :... .: :. :..: mKIAA0 RENSKYLDEELMVLNSN----SISLTSREPVAATWEATWSEGSKS-LDSEGTRAGEEDRG 1210 1220 1230 1240 1250 600 610 620 630 640 650 mKIAA1 QKTPFQENDGDSLLKTREGGLPEEQSLTPSPSANPEISVSKGIHQDPQLEAEAGAPHCGT : mKIAA0 QLEDDAVYEDQSQKLQELEQEKKRKEQEAQEEERRKQREAQAWAEAEAKAWAEAQARAEA 1260 1270 1280 1290 1300 1310 785 residues in 1 query sequences 1768232 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:36:10 2006 done: Mon Mar 27 10:36:11 2006 Scan time: 0.890 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]