FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0967.ptfa, 1443 aa vs ./tmplib.26680 library 1767574 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.0918+/-0.00637; mu= 4.1036+/- 0.424 mean_var=217.5693+/-51.551, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0870 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4203 ( 1062 res) mfj16282 (1062) 258 46 4.2e-05 mKIAA0316 ( 1239 res) mbg08366 (1239) 203 39 0.0056 >>mKIAA4203 ( 1062 res) mfj16282 (1062 aa) initn: 179 init1: 84 opt: 258 Z-score: 183.9 bits: 46.2 E(): 4.2e-05 Smith-Waterman score: 284; 24.675% identity (27.536% ungapped) in 385 aa overlap (73-431:43-413) 50 60 70 80 90 mKIAA0 RARLKSNPVKVHFAEEVLVSGHSQGNSLLCMPNVLKV--YLENGQ-----TKAFKFEANT : :::: :.:... .. .. : mKIAA4 AAYLDPNLNHTPSSSTKTHLGTGMERSPGAMERVLKVFHYFESSSEPTTWASIIRHGDAT 20 30 40 50 60 70 100 110 120 130 140 150 mKIAA0 TVKDIILTVKEKLSIRSIEYFALALEEQYSISRLHLLHEEELVQQVVEREE----SQDSR :. :: . .. ... . ... : . : ..: :: . :..: :. : .. . mKIAA4 DVRGIIQKIVDSHKVKHVACYGFRLSHLRS-EEVHWLHVDMGVSSVREKYELAHPPEEWK 80 90 100 110 120 130 160 170 180 190 200 mKIAA0 CLFRVSFVPKDPLDLLKEDPVAFEYLYLQSCSDVLQERFAVEMKCNSALRLAALHIQE-- .:. ..:: :. . :: .....: : :: .:: .: .. . ::.:. :.:.. mKIAA4 YELRIRYLPKGFLNQFTEDKPTLNFFYQQVKSDYMQE-IADQVDQEIALKLGCLEIRRSY 140 150 160 170 180 190 210 220 230 240 250 260 mKIAA0 -RIYACAQPQKISLKYIEKDWGIENFISPTLLRNMKGKDIKKAISFHMKRNQNLLEPRQK .. . : .: . . .::: :.. :. .:: ..:.: ..: :. ... :: :.. mKIAA4 WEMRGNALEKKSNYEVLEKDVGLKRFFPKSLLDSVKAKTLRKLIQQTFRQFANL--NREE 200 210 220 230 240 270 280 290 300 310 320 mKIAA0 QLISAAQLRLNYLQILGELKTYGGKVFNATLMLQDRESYIALLVGAKYGISQIINSKLNI .. :....::. . . . :. .: . : . : .: . ::: . .. : mKIAA4 SI-------LKFFEILSPVYRFDKECFKCALGSSWIIS-VELAIGPEEGISYLTDKGCNP 250 260 270 280 290 300 330 340 350 360 370 380 mKIAA0 ISTLAEFANISRVELT--EESEKVSMVKVYLQDV-KVLTLLLESSS-AKDLACLIAGYYR . ::.: ... .. . :.... .:... . . . ::. : . :...: :: :: : mKIAA4 -THLADFNQVQTIQYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCR 310 320 330 340 350 390 400 410 420 430 mKIAA0 LFVDPANSVFLWS----GNRR----PTHRVSAEEGYESRACSDSEESSEVDCVLEPLSDR : :. :.. :. :.: : : ..:....: : :: .. .. . : mKIAA4 L-VNGATQSFIIRPQKEGERALPSIPKLANSEKQGMRTHAVSVSETDDYAEIIDEEDTYT 360 370 380 390 400 410 440 450 460 470 480 490 mKIAA0 CLVKLSLCRPFAREEQPPGDSPTPEATRRGPSTCGASSMTDSAESEASDSANTESRGCRT mKIAA4 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGVYLSPENPALAVAIKTCKNCTSDSVREKF 420 430 440 450 460 470 >>mKIAA0316 ( 1239 res) mbg08366 (1239 aa) initn: 394 init1: 202 opt: 203 Z-score: 145.8 bits: 39.3 E(): 0.0056 Smith-Waterman score: 251; 20.271% identity (23.261% ungapped) in 1105 aa overlap (398-1438:208-1234) 370 380 390 400 410 420 mKIAA0 ESSSAKDLACLIAGYYRLFVDPANSVFLWSGNRRPT-HRVSAEEGYESRACSDSEESSEV : ..: : . :. .. : ...: : : mKIAA0 DLTPDTDSIQFVANSVYANIGDVKNFEAPEGIEEPLLHDICYAENTDD-AEDEDEVSCEE 180 190 200 210 220 230 430 440 450 460 470 mKIAA0 DCVLEPLSDRCLVKLSLCR----PFAREEQPPGDSPTPEATRRGPSTCGAS---SMTDSA : :. ... .. :: .. : ::. . :. . :. .. ::. mKIAA0 DLVVGEMNQPAILDLSGSSDDIIDLTTLPPPEGDDNEDDFLLRSLNMAIAAPPPGFRDSS 240 250 260 270 280 290 480 490 500 510 520 530 mKIAA0 ESEASDSANTESRGCRTSGSSESMDALEEDDLDACSSSGTSFFHFG-PPGFSKGLET--N . : ..: : . . .::: . . . . .:: .:. . . : :. . ::. mKIAA0 DEEDTQSQATSFHEDKEQGSSLQNEEIPVSLIDAVPTSAEGKCEKGLDPAVVSTLEALEA 300 310 320 330 340 350 540 550 560 570 580 590 mKIAA0 SQEENSRVETSGFLCLLDLGQNANPQCQKIDGPQGLASEACSWGPELSMGRLDP----RL .::... :.:: : . .:. .. .: . .:: . : ::. .. . :. mKIAA0 LSEEQQKSENSGVAIL----RAYSPESSSDSGNETNSSEM-TEGSELAAAQKQSESLSRM 360 370 380 390 400 410 600 610 620 630 640 mKIAA0 YEGSRTDYYNLC-------SSISPGSHLSDSGSESTASRQGAA-PPQWCQQGWMEAQSGS . ... :. : .: .:. : ..:.. :.: .. ::. . : . mKIAA0 FLATHEGYHPLAEEQTEFPTSKAPSVGLPPKSSHGLAARPATDLPPKV-------VPSKQ 420 430 440 450 460 650 660 670 680 690 700 mKIAA0 MLESLGLPALPPLAFEGGSSDEEYYDAADKLTPPDTLSGPRAADPSAMRLQSQSRTRGSE .:.: . : . .: :.. . . .. : . .: ... .. mKIAA0 ILHSDHMEMEPETMETKSVTD--YFSKLHMGSVAYSCTSKRKS-----KLP-EGEGKSPL 470 480 490 500 510 710 720 730 740 750 760 mKIAA0 EGLHPGPEEGEPSRQGGVKKYAKSLRKRRSFLQTDHTSQVSFPLEASASQENTDDVCYYD : :: .. . .. . ... .:. : .. : : .: :: .: ..... .: mKIAA0 SGNIPGKKQ-QGTKIAEIEEDTKGKAGTVSSRDNPHLS--TFNLERTAFRKDSQR--WYV 520 530 540 550 560 570 770 780 790 800 810 820 mKIAA0 REPYLTLTAPSPTVSSLQDMQGEPGLLETKALGLLASLRETKSTNPASRIMEMEPETMET .. . . ... . ::: . .: : . : ... :: . . . mKIAA0 ASDGGVVEKSGMEAPAMKVFPRGPGLGNREAEGKEDGTVEG-GADDASVLGQGD------ 580 590 600 610 620 830 840 850 860 870 mKIAA0 KSVIDSRVSSISAIRLRIDPSNTENPVTTDGSSASIPHS------PHHSNPGSSSPQAA- . . : .. ... . .: .:..: ... : .. .: :: :. mKIAA0 RFLTD--MACVASAKDLDNPEDTDSPSCDHATKLSEAEDNVARLCDYHLAKRMSSLQSEG 630 640 650 660 670 680 880 890 900 910 920 930 mKIAA0 --QVRPFPILSPDQDPGGSTPKELTAEPEDSTF-PLSSDHPNPDNPGPHHVSQGDTSELG ... : : : .. . : : .: . : . : :: : .: mKIAA0 HFSLQSSQGSSVDTGCGPGSSSSACATPVESPLCPSMGKHMIPDASG-----KGGRYISP 690 700 710 720 730 940 950 960 970 980 990 mKIAA0 EVRSEIGSESFLINHVQEVIPQITGPLCPGDGPTSGECEVNSEETALAADEVQQGQLSLD : :. : . . .:. :: : .:: . : . .::. :: . : : mKIAA0 EERAP-GHPNHGATF-EELHPQTEG-MCP-------RMTVPALHTAINADPLF-GTL--- 740 750 760 770 780 1000 1010 1020 1030 1040 1050 mKIAA0 SDREVMHRNGPSLFQKGSGKDLGDSKGDRLDNVPQALDVRAPAGEINSSLCSEPPATGTG :. :: :.. : . : . .: ..:.: .: : . : . mKIAA0 --RDGCHRL-PKI--KETTVALTEPGKERQGGMPSAW---SPHPEADPILLPSNIHLESK 790 800 810 820 830 1060 1070 1080 1090 1100 1110 mKIAA0 RTSPDSEGENREAQEQELLTELDLAP-DFLLPSAFPPETIKA-EQLDRVIGEDSAPVST- ::... .. : . .. : :. : : . .: .. .:.. :.::. mKIAA0 VPSPNQDPNDFSQGIQAFGEAVSWWPADLRGGSPRTPPSQRALRHSSRIL---SGPVGLE 840 850 860 870 880 890 1120 1130 1140 1150 1160 mKIAA0 SQQVCVHTVPSL--PKLSPCQE--EPRSVDSGHGSPAESKGDSPIICLPPERSFLCFAPE . : .. : :: : .. :: : .. :. .. .. . . : .: .: mKIAA0 TFQERTKGVVSLKYPGITEAQEVSSERRAELPLGKKLTKSFSQSSMHFISEGKFHKRSPM 900 910 920 930 940 950 1170 1180 1190 1200 1210 1220 mKIAA0 SHPEGSTSLSRVTSFSFAGINEVAPAEIGIEHCRCHFSYATCFRGPQPETEEEDGDPQTH :: . ... :. . : . .:: ::: :: . : . :. : : . mKIAA0 SHKD--SKVYRTLPLR--------KLESSNWRCRGPFSY--CFLN-QGQDEDGDEDEEEG 960 970 980 990 1230 1240 1250 1260 mKIAA0 PAAPLTS---PPSAGSQVTLPWRAARAYSCTTP---LSRKS--HIWPE------------ :. .: :. . .. : .. . . ::: . ..: : mKIAA0 EATLQVSCLYRPQITQAMSEPGNSSLVVGLQKQGEELSRGTALKVWTEDPDGPDDLDFSS 1000 1010 1020 1030 1040 1050 1270 1280 1290 1300 1310 1320 mKIAA0 --FCSRALR--QLKTTPTNAPEGFVQLTESLLELQDILEASWGVGNKHPPDKCTLHFSES : .: : ::.. . :.::.. .. :: ...:. . .. :. : .:. mKIAA0 LAFDARIARINALKANTYGMPDGFLEAQNDANELLCLVRATKARKEESRPETYDLTLSQY 1060 1070 1080 1090 1100 1110 1330 1340 1350 1360 1370 1380 mKIAA0 RNRLCMGSQKLLASCQHVIRMDQSPEEMQGAVRVTFQHLVQLAGLCFQFTDCSRCSTRHR .. : . :..: ..:... ..::::: :. .:: : :. :.... :... mKIAA0 KQLLSIESRQLGSACRKMAMAEKSPEEMLLAMSSSFQVLCCLTEACMRLVKVVNTETQRQ 1120 1130 1140 1150 1160 1170 1390 1400 1410 1420 1430 1440 mKIAA0 EVAGNLRDVVYTYHQFVEAAKLTCERGYHDFSVKLLARQCTALTAAVFCLTQKFRASTAL :..... .:: .: ...::. . . : .. : :. ....: : ::.... mKIAA0 EIVAKIDEVVINYICLLKAAEAATGKTTGDPNIGLSMRHSATMAALVSTLTRSLKMLLNK 1180 1190 1200 1210 1220 1230 1443 residues in 1 query sequences 1767574 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:32:52 2006 done: Mon Mar 27 10:32:54 2006 Scan time: 1.260 Display time: 0.190 Function used was FASTA [version 3.4t11 Apr 17, 2002]