FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00217.ptfa, 590 aa vs ./tmplib.26680 library 1768427 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.2768+/-0.00472; mu= 20.8769+/- 0.316 mean_var=111.4925+/-26.213, 0's: 0 Z-trim: 5 B-trim: 8 in 1/35 Lambda= 0.1215 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0161 ( 350 res) mfj06138 ( 350) 276 59 8.9e-10 mKIAA4199 ( 510 res) mfj24036 ( 510) 229 51 3.3e-07 >>mKIAA0161 ( 350 res) mfj06138 (350 aa) initn: 225 init1: 85 opt: 276 Z-score: 267.9 bits: 58.8 E(): 8.9e-10 Smith-Waterman score: 288; 24.537% identity (27.895% ungapped) in 216 aa overlap (217-423:78-276) 190 200 210 220 230 240 mFLJ00 TPRNYELLDVVEAVRHSQDRAFLRRLLAQECAVCGWALPRNRVQALISCECTICPECFRQ : .: : ... .. .:.: .: :..: mKIAA0 LTSALPTDCSAMTTARYRPTWDLALDPLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQ 50 60 70 80 90 100 250 260 270 280 290 300 mFLJ00 HFTIALKEKHITDMVCP--ACGRPDLTDDAQLLSYFSTLDIQLRESLDPDAYALFHKKLT . . .:: : . :: :: . .. .. . .. .: ..:. . .:: mKIAA0 YVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLF----- 110 120 130 140 150 160 310 320 330 340 350 mFLJ00 EAVLMRDPKFLWC------AQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRS :: :: : :.. : . . : : . :: :: .: : :.. mKIAA0 ------DPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKACDMEFCSACKARW---HPGQG 170 180 190 200 210 360 370 380 390 400 410 mFLJ00 CEDFQNWKRTNDPEYQAQGLAMYLQENGID-CPKCKFSYALARGGCMHFHCTQCRHQFCS : . . : : .... : . : ::::. : :: .. : .:.: :: mKIAA0 CPE--TMPITFLPGETSSAFKMEEGDAPIKRCPKCRV-YIERDEGCAQMMCKNCKHAFCW 220 230 240 250 260 270 420 430 440 450 460 470 mFLJ00 GCYNAFYAKNKCPDPNCKVKKSLHGHHPRDCLFYLRDWTAARLQKLLQDNNVMFNTEPPA : ... mKIAA0 YCLESLDDDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLAT 280 290 300 310 320 330 >>mKIAA4199 ( 510 res) mfj24036 (510 aa) initn: 138 init1: 102 opt: 229 Z-score: 221.9 bits: 50.8 E(): 3.3e-07 Smith-Waterman score: 278; 22.266% identity (25.792% ungapped) in 256 aa overlap (215-455:154-389) 190 200 210 220 230 240 mFLJ00 QETPRNYELLDVVEAVRHSQDRAFLRRLLAQECAVCGWALPRNRVQALISCECTICPECF ..:::: . .. . .: .:. .: :. mKIAA4 DRYRSNSAQLLVEARVQPNPSKHVPTAHPPHHCAVCMQFVRKENLLSL-ACQHQFCRSCW 130 140 150 160 170 180 250 260 270 280 290 300 mFLJ00 RQHFTIALKEKHITDMVCPACGRPDLTDDAQLLSYFSTLDIQLRESLDPDAYALFHKKLT .:: .. .:. . . : : : : . .. . . .::.. ... : mKIAA4 EQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLP--NEELRDK--------YRRYLF 190 200 210 220 230 310 320 330 340 350 360 mFLJ00 EAVLMRDPKFLWC--AQCSFGF-IYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCED . . .. : :.: . . . : . .. : .: ..:: .:.... : .: mKIAA4 RDYVESHFQLQLCPGADCPMVIRVQEPRARRVQCNRCSEVFCFKCRQMY---HAPTDCAT 240 250 260 270 280 370 380 390 400 410 mFLJ00 FQNW--KRTNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGC ...: : ..: : : :.. . :::::.. ::: :..:..:.:.:: : mKIAA4 IRKWLTKCADDSE-----TANYISAHTKDCPKCNICIE-KNGGCNHMQCSKCKHDFCWMC 290 300 310 320 330 340 420 430 440 450 460 mFLJ00 YNAFYAKN----KC------PDPNCKVKKSLHGHHPRDCLFYLRDWTAARLQKLLQDNNV . . ... .: :: . ... . . :::.. : mKIAA4 LGDWKTHGSEYYECSRYKENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTY 350 360 370 380 390 400 470 480 490 500 510 520 mFLJ00 MFNTEPPAGTRAVPGGGCRVMEQKEVHSGFRDEACGKETPPGYAGLCQAHYKEYLVSLIN mKIAA4 ERIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQ 410 420 430 440 450 460 590 residues in 1 query sequences 1768427 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:16 2006 done: Mon Mar 27 10:08:17 2006 Scan time: 0.760 Display time: 0.020 Function used was FASTA [version 3.4t11 Apr 17, 2002]