# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh01522.fasta.nr -Q ../query/mFLJ00381.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00381, 410 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7903909 sequences Expectation_n fit: rho(ln(x))= 6.2056+/-0.000202; mu= 6.5022+/- 0.011 mean_var=127.0315+/-24.245, 0's: 39 Z-trim: 73 B-trim: 194 in 1/67 Lambda= 0.113794 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847524|dbj|BAD21434.1| mFLJ00381 protein [Mus ( 410) 2836 476.6 4.6e-132 gi|220939481|emb|CAX15512.1| ataxin 7-like 2 [Mus ( 661) 1771 301.9 2.7e-79 gi|220939480|emb|CAX15511.1| ataxin 7-like 2 [Mus ( 664) 1771 301.9 2.8e-79 gi|219841956|gb|AAI44757.1| Atxn7l2 protein [Mus m ( 696) 1771 302.0 2.8e-79 gi|26338448|dbj|BAC32895.1| unnamed protein produc ( 696) 1771 302.0 2.8e-79 gi|57242957|gb|AAH88996.1| Atxn7l2 protein [Mus mu ( 697) 1771 302.0 2.8e-79 gi|148670011|gb|EDL01958.1| ataxin 7-like 2, isofo ( 714) 1771 302.0 2.9e-79 gi|148670010|gb|EDL01957.1| ataxin 7-like 2, isofo ( 754) 1771 302.0 3e-79 gi|67678354|gb|AAH98000.1| Atxn7l2 protein [Rattus ( 719) 1727 294.8 4.3e-77 gi|109465373|ref|XP_227583.4| PREDICTED: similar t ( 744) 1727 294.8 4.5e-77 gi|149025680|gb|EDL81923.1| hypothetical LOC310781 ( 754) 1727 294.8 4.5e-77 gi|119576793|gb|EAW56389.1| hCG2043250, isoform CR ( 353) 1600 273.6 5e-71 gi|109013403|ref|XP_001089795.1| PREDICTED: simila ( 769) 1573 269.5 1.9e-69 gi|114558256|ref|XP_513623.2| PREDICTED: ataxin 7- ( 722) 1566 268.3 3.9e-69 gi|56206277|emb|CAI22938.1| ataxin 7-like 2 [Homo ( 349) 1556 266.4 7.4e-69 gi|74745198|sp|Q5T6C5.1|AT7L2_HUMAN RecName: Full= ( 722) 1556 266.7 1.2e-68 gi|119576791|gb|EAW56387.1| hCG2043250, isoform CR (1033) 1556 266.8 1.6e-68 gi|119576790|gb|EAW56386.1| hCG2043250, isoform CR (1102) 1556 266.9 1.7e-68 gi|73959329|ref|XP_852617.1| PREDICTED: similar to ( 721) 1540 264.1 7.6e-68 gi|73959331|ref|XP_547242.2| PREDICTED: similar to ( 743) 1540 264.1 7.8e-68 gi|151555852|gb|AAI49470.1| ATXN7L2 protein [Bos t ( 722) 1526 261.8 3.7e-67 gi|21748608|dbj|BAC03441.1| FLJ00381 protein [Homo ( 343) 634 115.0 2.7e-23 gi|149637453|ref|XP_001505303.1| PREDICTED: hypoth ( 495) 598 109.2 2.1e-21 gi|194209451|ref|XP_001491852.2| PREDICTED: simila ( 804) 337 66.6 2.3e-08 gi|73985109|ref|XP_541817.2| PREDICTED: similar to ( 892) 335 66.3 3.1e-08 gi|73985107|ref|XP_848286.1| PREDICTED: similar to ( 892) 335 66.3 3.1e-08 gi|73981774|ref|XP_858311.1| PREDICTED: similar to ( 256) 322 63.7 5.7e-08 gi|194390648|dbj|BAG62083.1| unnamed protein produ ( 738) 326 64.8 7.7e-08 gi|114615321|ref|XP_001162005.1| PREDICTED: ataxin ( 832) 326 64.8 8.3e-08 gi|160413379|sp|Q9ULK2.2|AT7L1_HUMAN RecName: Full ( 833) 326 64.8 8.3e-08 gi|119603779|gb|EAW83373.1| ataxin 7-like 4, isofo ( 840) 326 64.8 8.4e-08 gi|163937854|ref|NP_065776.1| ataxin 7-like 1 isof ( 861) 326 64.8 8.5e-08 gi|114615319|ref|XP_519298.2| PREDICTED: ataxin 7- ( 861) 326 64.8 8.5e-08 gi|114615325|ref|XP_001161889.1| PREDICTED: ataxin ( 872) 326 64.8 8.6e-08 gi|151554901|gb|AAI48159.1| ATXN7L1 protein [Bos t ( 953) 326 64.9 9.2e-08 gi|119603777|gb|EAW83371.1| ataxin 7-like 4, isofo ( 964) 326 64.9 9.2e-08 gi|119603778|gb|EAW83372.1| ataxin 7-like 4, isofo ( 975) 326 64.9 9.3e-08 gi|109479156|ref|XP_001073904.1| PREDICTED: simila ( 648) 322 64.1 1.1e-07 gi|109478124|ref|XP_234056.4| PREDICTED: similar t ( 741) 322 64.1 1.2e-07 gi|76648715|ref|XP_616979.2| PREDICTED: similar to ( 774) 321 64.0 1.4e-07 gi|194378500|dbj|BAG63415.1| unnamed protein produ ( 303) 312 62.1 2e-07 gi|148704932|gb|EDL36879.1| mCG142289, isoform CRA ( 665) 316 63.1 2.2e-07 gi|148704930|gb|EDL36877.1| mCG127168, isoform CRA ( 729) 316 63.1 2.4e-07 gi|74217590|dbj|BAE33547.1| unnamed protein produc ( 739) 316 63.1 2.4e-07 gi|187955212|gb|AAI47480.1| Ataxin 7-like 1 [Mus m ( 739) 316 63.1 2.4e-07 gi|148704929|gb|EDL36876.1| mCG127168, isoform CRA ( 757) 316 63.1 2.4e-07 gi|163965448|ref|NP_001028608.2| ataxin 7-like 1 i ( 863) 316 63.2 2.7e-07 gi|194384392|dbj|BAG64969.1| unnamed protein produ ( 747) 314 62.8 3e-07 gi|114587742|ref|XP_001174609.1| PREDICTED: ataxin ( 747) 314 62.8 3e-07 gi|114587740|ref|XP_001174612.1| PREDICTED: ataxin ( 767) 314 62.8 3.1e-07 >>gi|47847524|dbj|BAD21434.1| mFLJ00381 protein [Mus mus (410 aa) initn: 2836 init1: 2836 opt: 2836 Z-score: 2527.3 bits: 476.6 E(): 4.6e-132 Smith-Waterman score: 2836; 100.000% identity (100.000% similar) in 410 aa overlap (1-410:1-410) 10 20 30 40 50 60 mFLJ00 SYCFLGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 SYCFLGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTC 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 KIHSVHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 KIHSVHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQG 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 VAAVAAPNTTFSSLSKQTYPYCALPRYVLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 VAAVAAPNTTFSSLSKQTYPYCALPRYVLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPA 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 SIPPVKDSLVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 SIPPVKDSLVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKS 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 SKGKEGVEMEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 SKGKEGVEMEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGT 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 VGPRVKRAGPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 VGPRVKRAGPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLA 310 320 330 340 350 360 370 380 390 400 410 mFLJ00 TYCRPVKAKHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 TYCRPVKAKHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED 370 380 390 400 410 >>gi|220939481|emb|CAX15512.1| ataxin 7-like 2 [Mus musc (661 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.8 bits: 301.9 E(): 2.7e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:174-657) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|220 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 150 160 170 180 190 200 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 210 220 230 240 250 260 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|220 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGAQASSE 270 280 290 300 310 320 mFLJ00 -----------------------------------------YV----------------- :: gi|220 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 330 340 350 360 370 380 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|220 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 390 400 410 420 430 440 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 450 460 470 480 490 500 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 510 520 530 540 550 560 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 570 580 590 600 610 620 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|220 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 630 640 650 660 >>gi|220939480|emb|CAX15511.1| ataxin 7-like 2 [Mus musc (664 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.8 bits: 301.9 E(): 2.8e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:177-660) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|220 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 150 160 170 180 190 200 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 210 220 230 240 250 260 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|220 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGAQASSE 270 280 290 300 310 320 mFLJ00 -----------------------------------------YV----------------- :: gi|220 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 330 340 350 360 370 380 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|220 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 390 400 410 420 430 440 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 450 460 470 480 490 500 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 510 520 530 540 550 560 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 570 580 590 600 610 620 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|220 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 630 640 650 660 >>gi|219841956|gb|AAI44757.1| Atxn7l2 protein [Mus muscu (696 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.5 bits: 302.0 E(): 2.8e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:209-692) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|219 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 180 190 200 210 220 230 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 240 250 260 270 280 290 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|219 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGARASSE 300 310 320 330 340 350 mFLJ00 -----------------------------------------YV----------------- :: gi|219 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 360 370 380 390 400 410 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|219 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 420 430 440 450 460 470 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 480 490 500 510 520 530 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 540 550 560 570 580 590 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 600 610 620 630 640 650 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|219 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 660 670 680 690 >>gi|26338448|dbj|BAC32895.1| unnamed protein product [M (696 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.5 bits: 302.0 E(): 2.8e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:209-692) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|263 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 180 190 200 210 220 230 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 240 250 260 270 280 290 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|263 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGAQASSE 300 310 320 330 340 350 mFLJ00 -----------------------------------------YV----------------- :: gi|263 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 360 370 380 390 400 410 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|263 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 420 430 440 450 460 470 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 480 490 500 510 520 530 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 540 550 560 570 580 590 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 600 610 620 630 640 650 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|263 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 660 670 680 690 >>gi|57242957|gb|AAH88996.1| Atxn7l2 protein [Mus muscul (697 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.5 bits: 302.0 E(): 2.8e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:210-693) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|572 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 180 190 200 210 220 230 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 240 250 260 270 280 290 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|572 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGAQASSE 300 310 320 330 340 350 mFLJ00 -----------------------------------------YV----------------- :: gi|572 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 360 370 380 390 400 410 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|572 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 420 430 440 450 460 470 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 480 490 500 510 520 530 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 540 550 560 570 580 590 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 600 610 620 630 640 650 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|572 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 660 670 680 690 >>gi|148670011|gb|EDL01958.1| ataxin 7-like 2, isoform C (714 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.4 bits: 302.0 E(): 2.9e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:227-710) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|148 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 200 210 220 230 240 250 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 260 270 280 290 300 310 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|148 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGAQASSE 320 330 340 350 360 370 mFLJ00 -----------------------------------------YV----------------- :: gi|148 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 380 390 400 410 420 430 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|148 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 440 450 460 470 480 490 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 500 510 520 530 540 550 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 560 570 580 590 600 610 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 620 630 640 650 660 670 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|148 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 680 690 700 710 >>gi|148670010|gb|EDL01957.1| ataxin 7-like 2, isoform C (754 aa) initn: 1771 init1: 1771 opt: 1771 Z-score: 1579.1 bits: 302.0 E(): 3e-79 Smith-Waterman score: 2270; 76.033% identity (76.033% similar) in 484 aa overlap (35-402:267-750) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|148 GSSHRAEGSPPEKEASGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 240 250 260 270 280 290 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV 300 310 320 330 340 350 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- :::::::::::::::::::::: gi|148 AAPNTTFSSLSKQTYPYCALPRSHASSESEVDDEGPCGGDGDPGLFPFPLPRGGAQASSE 360 370 380 390 400 410 mFLJ00 -----------------------------------------YV----------------- :: gi|148 ESEEEGISDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 420 430 440 450 460 470 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS :::::::::::::::::::::::::::::::::::::::: gi|148 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS 480 490 500 510 520 530 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 540 550 560 570 580 590 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA 600 610 620 630 640 650 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA 660 670 680 690 700 710 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|148 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 720 730 740 750 >>gi|67678354|gb|AAH98000.1| Atxn7l2 protein [Rattus nor (719 aa) initn: 1727 init1: 1727 opt: 1727 Z-score: 1540.3 bits: 294.8 E(): 4.3e-77 Smith-Waterman score: 2201; 73.554% identity (75.413% similar) in 484 aa overlap (35-402:232-715) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|676 GTSHRAEGSPPEKEPSGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 210 220 230 240 250 260 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::.::::::::::::::::::.::: gi|676 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPARKEPALERPSQEPPTAVQGAAAV 270 280 290 300 310 320 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- ::::.:::::::::::::.::: gi|676 AAPNNTFSSLSKQTYPYCTLPRSRASSESEVDDEGLCGGDGDPGLFPFPLPRGGAQASSE 330 340 350 360 370 380 mFLJ00 -----------------------------------------YV----------------- :: gi|676 ESEEEGTSDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 390 400 410 420 430 440 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS ::::::::::::: :::::::::: ::::::::.::.::: gi|676 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSSMGSCPRLPGPPPRPACPASVPPIKDS 450 460 470 480 490 500 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|676 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 510 520 530 540 550 560 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|676 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRMKRA 570 580 590 600 610 620 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::: :::::::::::::::::::.:::::.::::::::::::::::::::::: gi|676 GPLDCRGSPHSSPIPVKASQLENRGVAGHPTKVLPTNCLSEEEVAKKRKNLATYCRPVKA 630 640 650 660 670 680 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|676 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 690 700 710 >>gi|109465373|ref|XP_227583.4| PREDICTED: similar to at (744 aa) initn: 1727 init1: 1727 opt: 1727 Z-score: 1540.1 bits: 294.8 E(): 4.5e-77 Smith-Waterman score: 2201; 73.554% identity (75.413% similar) in 484 aa overlap (35-402:257-740) 10 20 30 40 50 60 mFLJ00 LGPWQEEARFFLGSSPKWTCDSLEPLSPTGKEFDLNRQCGVINPETKKICTRLLTCKIHS :::::::::::::::::::::::::::::: gi|109 GTSHRAEGSPPEKEPSGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHS 230 240 250 260 270 280 70 80 90 100 110 120 mFLJ00 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPAHKEPALERPSQEPPTAVQGVAAV :::::::::::::::::::::::::::::::::::::.::::::::::::::::::.::: gi|109 VHQRREVPGRAKDFDVLVAELKASSRKGESPKEKSPARKEPALERPSQEPPTAVQGAAAV 290 300 310 320 330 340 130 140 mFLJ00 AAPNTTFSSLSKQTYPYCALPR-------------------------------------- ::::.:::::::::::::.::: gi|109 AAPNNTFSSLSKQTYPYCTLPRSRASSESEVDDEGLCGGDGDPGLFPFPLPRGGAQASSE 350 360 370 380 390 400 mFLJ00 -----------------------------------------YV----------------- :: gi|109 ESEEEGTSDDLHLSPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLE 410 420 430 440 450 460 150 160 170 180 mFLJ00 --------------------LVSPSLSDPLSPSPMGSCPRLPGPAPRPACPASIPPVKDS ::::::::::::: :::::::::: ::::::::.::.::: gi|109 RHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSSMGSCPRLPGPPPRPACPASVPPIKDS 470 480 490 500 510 520 190 200 210 220 230 240 mFLJ00 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVE 530 540 550 560 570 580 250 260 270 280 290 300 mFLJ00 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRVKRA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|109 MEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSSCRGLSTKTKTALNLGLNGTVGPRMKRA 590 600 610 620 630 640 310 320 330 340 350 360 mFLJ00 GPLDCRGSPHPSPIPVKASQLENRGVAGHPAKVLPTTCLSEEEVAKKRKNLATYCRPVKA :::::::::: :::::::::::::::::::.:::::.::::::::::::::::::::::: gi|109 GPLDCRGSPHSSPIPVKASQLENRGVAGHPTKVLPTNCLSEEEVAKKRKNLATYCRPVKA 650 660 670 680 690 700 370 380 390 400 410 mFLJ00 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKVPIQLPED :::::::::::::::::::::::::::::::::: gi|109 KHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH 710 720 730 740 410 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 08:58:24 2009 done: Fri Mar 13 09:04:55 2009 Total Scan time: 887.140 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]