FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0746.ptfa, 1185 aa vs ./tmplib.26680 library 1767832 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.9023+/-0.00564; mu= 9.1510+/- 0.376 mean_var=176.0499+/-40.936, 0's: 0 Z-trim: 2 B-trim: 0 in 0/36 Lambda= 0.0967 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4137 ( 832 res) mbg17504 ( 832) 466 78 7.2e-15 >>mKIAA4137 ( 832 res) mbg17504 (832 aa) initn: 137 init1: 86 opt: 466 Z-score: 359.3 bits: 78.0 E(): 7.2e-15 Smith-Waterman score: 466; 26.904% identity (28.909% ungapped) in 591 aa overlap (593-1159:258-831) 570 580 590 600 610 mKIAA0 LFQSLLQMDLLTVPWNQNDSVLEIGARIFEKAVKRLSGV----DGLHQ-ISSAIPFLMDS ::..:.: . : : : :..: .. mKIAA4 GMKILNGSNRKSQKREAYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKL 230 240 250 260 270 280 620 630 640 650 660 670 mKIAA0 SCCGYHKASYYLTVFYETGLNGPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGVDSYP . : :.. : .: .::. .: ....: :. :.. .. : :::... :. mKIAA4 TEEGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQ 290 300 310 320 330 340 680 690 700 710 720 730 mKIAA0 LDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDD-EILKVQTKE-DGDVFMWLKH . : . ..: .:... : .: : .. :. ::: :. : ... . :.... . mKIAA4 -SCESALTHYRLVANHVASDI-SLTGGSV-VQRIRLPDEVENPGMNSGMLEEDLIQYYQF 350 360 370 380 390 400 740 750 760 770 780 790 mKIAA0 EATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQG : .:.. :: :.:. . : .:: .: . :.... .: .. :. . . .. mKIAA4 LAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI 410 420 430 440 450 460 800 810 820 830 840 850 mKIAA0 VKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFRK---NYAKAAKYWLKAEEMGNPDAS : .. . ::. .::::. : . .::: : : :: : ::. :: :.: :.. mKIAA4 VPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQ 470 480 490 500 510 520 860 870 880 890 900 910 mKIAA0 YNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGGHIEGTLWCSLYYITGNLETFPRDPEK .:: .: .:: :: :. : .::. :.::::: . . .. .:. :. . mKIAA4 LQLGSMYYNGI--GVK-RDYKQALKYFNLASQGGHILAFYNLAQMHASGT--GVMRSCHT 530 540 550 560 570 920 930 940 950 960 970 mKIAA0 AVVWAKHVAEKNGYLGHVIRKGLNAYLEGLWHEALLYYVLAAETGIEVSQTNLAHICEER :: :.: :. : .. . . :.: . .. :.. :.: :: : ::.:.: : : ..: mKIAA4 AVELFKNVCER-GRWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGYEVAQSNAAFILDQR 580 590 600 610 620 630 980 990 1000 1010 1020 1030 mKIAA0 P-DLAGRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDLYYYGHQNQSQDLELSVQMYAQA ..:. . ..: .. : . . : .:.:: ..:: .. : : . : : mKIAA4 EATIVGENETYPRALLHWNRAASQ--GYTVARIKLGDYHFYGFGTDV-DYETAFIHYRLA 640 650 660 670 680 690 1040 1050 1060 1070 1080 mKIAA0 ALDGDS-QGFFNLAALIEEGAVIPHHI-LEFLEIDPSLHSSNTSILQELYERC--WSLSN . . : :..:::. . :.: : . : : : . ..: . . . : . mKIAA4 SEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLGVVYF 700 710 720 730 740 750 1090 1100 1110 1120 1130 1140 mKIAA0 EESLSPCSLAWLYLHL---RLL---WGAVLHSALIYFLGTFLLSVVIAWMVLYLQYISAS . . .. :. .: .:: : : . . .::: :::. : : . mKIAA4 LQYIREANIRDLFTQLDMDQLLGPEWDLYLMTIIALLLGT-----VIAYRQRQHQDIPVP 760 770 780 790 800 810 1150 1160 1170 1180 mKIAA0 ---GSSPAPAWVSADPTSSTPSPAVPPAADASDHDPPMMANGPEPRG : ::: . : .. :. mKIAA4 RPPGPRPAPPQQEGPPEQQPPQ 820 830 1185 residues in 1 query sequences 1767832 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:27:48 2006 done: Mon Mar 27 10:27:49 2006 Scan time: 1.040 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]