# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh01028.fasta.nr -Q ../query/mKIAA0887.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0887, 429 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7912667 sequences
Expectation_n fit: rho(ln(x))= 5.7291+/-0.000194; mu= 8.8062+/- 0.011
mean_var=100.2058+/-18.812, 0's: 37 Z-trim: 68 B-trim: 192 in 1/64
Lambda= 0.128123
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|109896152|sp|Q3TDN2.2|FAF2_MOUSE RecName: Full= ( 445) 2900 546.3 5.2e-153
gi|28436938|gb|AAH46817.1| Fas associated factor f ( 444) 2881 542.8 5.9e-152
gi|149039921|gb|EDL94037.1| rCG24095, isoform CRA_ ( 445) 2879 542.5 7.7e-152
gi|74731375|sp|Q96CS3.2|FAF2_HUMAN RecName: Full=F ( 445) 2862 539.3 6.8e-151
gi|74206628|dbj|BAE41569.1| unnamed protein produc ( 445) 2861 539.1 7.7e-151
gi|149726634|ref|XP_001502700.1| PREDICTED: UBX do ( 445) 2857 538.4 1.3e-150
gi|73953321|ref|XP_546218.2| PREDICTED: similar to ( 445) 2856 538.2 1.5e-150
gi|114603543|ref|XP_518117.2| PREDICTED: UBX domai ( 512) 2856 538.3 1.6e-150
gi|109079875|ref|XP_001090859.1| PREDICTED: simila ( 616) 2856 538.3 1.9e-150
gi|109896151|sp|Q2HJD0.1|FAF2_BOVIN RecName: Full= ( 445) 2840 535.2 1.1e-149
gi|148709204|gb|EDL41150.1| UBX domain containing ( 417) 2826 532.6 6.5e-149
gi|123984561|gb|ABM83626.1| UBX domain containing ( 417) 2788 525.6 8.5e-147
gi|224067538|ref|XP_002197465.1| PREDICTED: Fas as ( 445) 2758 520.1 4.2e-145
gi|118097394|ref|XP_414548.2| PREDICTED: similar t ( 445) 2754 519.3 6.9e-145
gi|34784061|gb|AAH56714.1| Zgc:194819 protein [Dan ( 444) 2523 476.6 4.9e-132
gi|190337446|gb|AAI63084.1| Zgc:194819 protein [Da ( 445) 2523 476.6 4.9e-132
gi|189546641|ref|XP_692028.3| PREDICTED: hypotheti ( 445) 2520 476.1 7.3e-132
gi|109896153|sp|Q28BP9.1|FAF2_XENTR RecName: Full= ( 445) 2510 474.2 2.6e-131
gi|163916315|gb|AAI57334.1| Expressed in T-cells a ( 445) 2509 474.1 3e-131
gi|82181994|sp|Q6AZH6.1|FAF2A_XENLA RecName: Full= ( 445) 2504 473.1 5.6e-131
gi|82184581|sp|Q6GQ69.1|FAF2B_XENLA RecName: Full= ( 445) 2460 465.0 1.6e-128
gi|74195995|dbj|BAE30554.1| unnamed protein produc ( 426) 2404 454.6 2e-125
gi|148709206|gb|EDL41152.1| UBX domain containing ( 432) 2404 454.6 2e-125
gi|119605481|gb|EAW85075.1| UBX domain containing ( 395) 2403 454.4 2.2e-125
gi|149039920|gb|EDL94036.1| rCG24095, isoform CRA_ ( 426) 2393 452.6 8.2e-125
gi|73953323|ref|XP_866039.1| PREDICTED: similar to ( 400) 2379 450.0 4.7e-124
gi|81882585|sp|Q5BK32.1|FAF2_RAT RecName: Full=FAS ( 346) 2309 437.0 3.3e-120
gi|119605480|gb|EAW85074.1| UBX domain containing ( 347) 2208 418.3 1.4e-114
gi|148709207|gb|EDL41153.1| UBX domain containing ( 356) 1893 360.1 4.8e-97
gi|47211405|emb|CAF94221.1| unnamed protein produc ( 313) 1699 324.2 2.7e-86
gi|149629428|ref|XP_001517276.1| PREDICTED: simila ( 340) 1689 322.4 1e-85
gi|210131806|gb|EEA79473.1| hypothetical protein B ( 451) 1638 313.1 8.8e-83
gi|210087528|gb|EEA35901.1| hypothetical protein B ( 451) 1637 312.9 1e-82
gi|115899399|ref|XP_780136.2| PREDICTED: similar t ( 438) 1510 289.4 1.1e-75
gi|212512936|gb|EEB15602.1| UBX domain-containing ( 442) 1334 256.9 7.1e-66
gi|215507167|gb|EEC16661.1| UBX domain-containing ( 442) 1302 251.0 4.3e-64
gi|194385630|dbj|BAG65190.1| unnamed protein produ ( 212) 1265 243.8 2.9e-62
gi|91093413|ref|XP_967701.1| PREDICTED: similar to ( 447) 1265 244.1 5e-62
gi|108880104|gb|EAT44329.1| fas-associated protein ( 445) 1250 241.3 3.4e-61
gi|156545412|ref|XP_001606512.1| PREDICTED: simila ( 433) 1247 240.8 4.9e-61
gi|66519591|ref|XP_395871.2| PREDICTED: similar to ( 434) 1244 240.2 7.1e-61
gi|167880448|gb|EDS43831.1| UBX domain-containing ( 440) 1239 239.3 1.4e-60
gi|193610557|ref|XP_001951340.1| PREDICTED: simila ( 440) 1166 225.8 1.6e-56
gi|55237707|gb|EAA12408.2| AGAP007977-PA [Anophele ( 439) 1101 213.8 6.5e-53
gi|156218711|gb|EDO39604.1| predicted protein [Nem ( 459) 1016 198.1 3.6e-48
gi|54645365|gb|EAL34105.1| GA10282 [Drosophila pse ( 462) 1009 196.8 8.9e-48
gi|194162366|gb|EDW77267.1| GK18177 [Drosophila wi ( 464) 1002 195.5 2.2e-47
gi|190615362|gb|EDV30886.1| GF14818 [Drosophila an ( 462) 966 188.9 2.2e-45
gi|194148276|gb|EDW63974.1| GJ17201 [Drosophila vi ( 463) 959 187.6 5.4e-45
gi|193912221|gb|EDW11088.1| GI16862 [Drosophila mo ( 463) 953 186.5 1.2e-44
>>gi|109896152|sp|Q3TDN2.2|FAF2_MOUSE RecName: Full=FAS- (445 aa)
initn: 2900 init1: 2900 opt: 2900 Z-score: 2903.3 bits: 546.3 E(): 5.2e-153
Smith-Waterman score: 2900; 100.000% identity (100.000% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
::::::::::::::::::::::::::::::::::::::::::::
gi|109 MAAPEEQDLTQEQTEKLLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|109 PNPPTLQEAGLSHTEVLFVQDLTDE
430 440
>>gi|28436938|gb|AAH46817.1| Fas associated factor famil (444 aa)
initn: 2516 init1: 2516 opt: 2881 Z-score: 2884.4 bits: 542.8 E(): 5.9e-152
Smith-Waterman score: 2881; 99.767% identity (99.767% similar) in 429 aa overlap (1-429:17-444)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
::::::::::::::::::::::::::::::::::::::::::::
gi|284 MAAPEEQDLTQEQTEKLLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
gi|284 FNPPPARPLQV-TADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|284 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
120 130 140 150 160 170
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|284 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
180 190 200 210 220 230
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|284 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
240 250 260 270 280 290
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|284 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
300 310 320 330 340 350
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|284 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
360 370 380 390 400 410
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|284 PNPPTLQEAGLSHTEVLFVQDLTDE
420 430 440
>>gi|149039921|gb|EDL94037.1| rCG24095, isoform CRA_b [R (445 aa)
initn: 2879 init1: 2879 opt: 2879 Z-score: 2882.3 bits: 542.5 E(): 7.7e-152
Smith-Waterman score: 2879; 98.834% identity (100.000% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
::::::::::.:::::::::::::::::::::::::::::::::
gi|149 MAAPEEQDLTQEQTEKLLQFQDLTGIDSMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 FNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
gi|149 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALSDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::.
gi|149 LRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPD
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|149 PNPPTLQEAGLSHTEVLFVQDLTDE
430 440
>>gi|74731375|sp|Q96CS3.2|FAF2_HUMAN RecName: Full=FAS-a (445 aa)
initn: 2862 init1: 2862 opt: 2862 Z-score: 2865.4 bits: 539.3 E(): 6.8e-151
Smith-Waterman score: 2862; 97.902% identity (99.767% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
:::::::::::::.::: .:::::::.:::::::::::::::::
gi|747 MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 FNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
:::::::::::.:::::::::::.::::::::::::::::::::::::::::::::::::
gi|747 DHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
gi|747 LRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
gi|747 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|747 PNPPTLQEAGLSHTEVLFVQDLTDE
430 440
>>gi|74206628|dbj|BAE41569.1| unnamed protein product [M (445 aa)
initn: 2861 init1: 2861 opt: 2861 Z-score: 2864.4 bits: 539.1 E(): 7.7e-151
Smith-Waterman score: 2861; 98.834% identity (99.068% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
::::::::::::::::::::::::::::::::::::::::::::
gi|742 MAAPEEQDLTQEQTEKLLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
::::::::: . :::::::::::
gi|742 PNPPTLQEADSATQEVLFVQDLTDE
430 440
>>gi|149726634|ref|XP_001502700.1| PREDICTED: UBX domain (445 aa)
initn: 2857 init1: 2857 opt: 2857 Z-score: 2860.4 bits: 538.4 E(): 1.3e-150
Smith-Waterman score: 2857; 97.902% identity (99.767% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
:::::::::::::.::: .:::::::.:::::::::::::::::
gi|149 MAAPEDRDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 FNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
:::::::::::.:::::::::::.::::::::::::::::::::::::::::::::::::
gi|149 DHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::.:::::::::::::::::::::.:::::::::::::::::::::::
gi|149 LRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERKLECLPPEPSPDDPE
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|149 PNPPTLQEAGLSHTEVLFVQDLTDE
430 440
>>gi|73953321|ref|XP_546218.2| PREDICTED: similar to pro (445 aa)
initn: 2856 init1: 2856 opt: 2856 Z-score: 2859.4 bits: 538.2 E(): 1.5e-150
Smith-Waterman score: 2856; 97.669% identity (99.767% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
:::::::::::::.::: .:::::::.:::::::::::::::::
gi|739 MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 FNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
:::::::::::.:::::::::::.::::::::::::::::::::::::::::::::::::
gi|739 DHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::.:::::::::::::::::::::.:::::::::::::::::::::::
gi|739 LRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERKLECLPPEPSPDDPE
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
gi|739 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|739 PNPPTLQEAGLSHTEVLFVQDLTDE
430 440
>>gi|114603543|ref|XP_518117.2| PREDICTED: UBX domain co (512 aa)
initn: 2856 init1: 2856 opt: 2856 Z-score: 2858.6 bits: 538.3 E(): 1.6e-150
Smith-Waterman score: 2856; 97.669% identity (99.767% similar) in 429 aa overlap (1-429:84-512)
10 20 30
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAA
:::::::::::::.::: .:::::::.:::
gi|114 VTVRTGQERRGGGKMAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAA
60 70 80 90 100 110
40 50 60 70 80 90
mKIAA0 VQDRLNEQEGVPSVFNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFT
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|114 VQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFT
120 130 140 150 160 170
100 110 120 130 140 150
mKIAA0 YYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 YYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDA
180 190 200 210 220 230
160 170 180 190 200 210
mKIAA0 KRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALR
:::::::::::::::::::::::::.:::::::::::.::::::::::::::::::::::
gi|114 KRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALR
240 250 260 270 280 290
220 230 240 250 260 270
mKIAA0 ENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 ENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQT
300 310 320 330 340 350
280 290 300 310 320 330
mKIAA0 QVLRQQQDEAYLASLRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERK
::::::::::::::::::::::::::::.:::::::::::::::::::::.:::::::::
gi|114 QVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERK
360 370 380 390 400 410
340 350 360 370 380 390
mKIAA0 LECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEAN
420 430 440 450 460 470
400 410 420
mKIAA0 FPRRVLPCVPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
::::::::.::::::::::::::::::::::::::::::
gi|114 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
480 490 500 510
>>gi|109079875|ref|XP_001090859.1| PREDICTED: similar to (616 aa)
initn: 2856 init1: 2856 opt: 2856 Z-score: 2857.5 bits: 538.3 E(): 1.9e-150
Smith-Waterman score: 2856; 97.669% identity (99.767% similar) in 429 aa overlap (1-429:188-616)
10 20 30
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAA
:::::::::::::.::: .:::::::.:::
gi|109 VTVRTGQERRGGGKMAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAA
160 170 180 190 200 210
40 50 60 70 80 90
mKIAA0 VQDRLNEQEGVPSVFNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFT
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|109 VQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFT
220 230 240 250 260 270
100 110 120 130 140 150
mKIAA0 YYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 YYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDA
280 290 300 310 320 330
160 170 180 190 200 210
mKIAA0 KRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALR
:::::::::::::::::::::::::.:::::::::::.::::::::::::::::::::::
gi|109 KRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALR
340 350 360 370 380 390
220 230 240 250 260 270
mKIAA0 ENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQT
400 410 420 430 440 450
280 290 300 310 320 330
mKIAA0 QVLRQQQDEAYLASLRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERK
::::::::::::::::::::::::::::.:::::::::::::::::::::.:::::::::
gi|109 QVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERK
460 470 480 490 500 510
340 350 360 370 380 390
mKIAA0 LECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEAN
520 530 540 550 560 570
400 410 420
mKIAA0 FPRRVLPCVPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
::::::::.::::::::::::::::::::::::::::::
gi|109 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
580 590 600 610
>>gi|109896151|sp|Q2HJD0.1|FAF2_BOVIN RecName: Full=FAS- (445 aa)
initn: 2840 init1: 2840 opt: 2840 Z-score: 2843.4 bits: 535.2 E(): 1.1e-149
Smith-Waterman score: 2840; 97.203% identity (99.534% similar) in 429 aa overlap (1-429:17-445)
10 20 30 40
mKIAA0 LLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSV
:::::::::::::.::: .:::::::.:::::::::::::::::
gi|109 MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSV
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 FNPPPARPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 FNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
::::::.:::::::::::::::::::::::::::: ::::::::::::::::::::::::
gi|109 IRPDPRNRVTDPVGDIVSFMHSFEEKYGRAHPVFYLGTYSQALNDAKRELRFLLVYLHGD
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA0 DHQDSDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
:::::::::::.:::::::::::.::::::::::::::::::::::::::::::::::::
gi|109 DHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA0 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA0 LRADQEKERKKREEKERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
::::::::::::::.:::::::::::::::::::::.:::::::::::::::::::::::
gi|109 LRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERKLECLPPEPSPDDPE
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA0 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
gi|109 SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCLPSEEW
370 380 390 400 410 420
410 420
mKIAA0 PNPPTLQEAGLSHTEVLFVQDLTDE
:::::::::::::::::::::::::
gi|109 PNPPTLQEAGLSHTEVLFVQDLTDE
430 440
429 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Mon Mar 16 23:13:19 2009 done: Mon Mar 16 23:19:53 2009
Total Scan time: 892.430 Total Display time: 0.120
Function used was FASTA [version 34.26.5 April 26, 2007]