# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh00930.fasta.nr -Q ../query/mKIAA0332.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0332, 712 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7901252 sequences Expectation_n fit: rho(ln(x))= 6.5245+/-0.000209; mu= 7.6200+/- 0.012 mean_var=163.0806+/-31.209, 0's: 31 Z-trim: 92 B-trim: 82 in 2/64 Lambda= 0.100432 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|171460908|ref|NP_080752.2| U2-associated SR140 ( 985) 4762 702.6 1.7e-199 gi|171460910|ref|NP_001108449.1| U2-associated SR1 (1029) 4762 702.6 1.8e-199 gi|109485108|ref|XP_001064961.1| PREDICTED: simila ( 999) 4751 701.0 5.3e-199 gi|62654101|ref|XP_236501.3| PREDICTED: similar to (1029) 4751 701.0 5.4e-199 gi|148688989|gb|EDL20936.1| RIKEN cDNA 2610101N10 (1028) 4748 700.6 7.2e-199 gi|13623693|gb|AAH06474.1|AAH06474 Unknown (protei (1027) 4746 700.3 8.8e-199 gi|147668553|sp|O15042.2|SR140_HUMAN RecName: Full (1029) 4746 700.3 8.9e-199 gi|45946398|gb|AAH68265.1| RIKEN cDNA 2610101N10 g ( 985) 4744 700.0 1.1e-198 gi|146329994|sp|Q6NV83.2|SR140_MOUSE RecName: Full (1029) 4744 700.0 1.1e-198 gi|75070608|sp|Q5R7X2.1|SR140_PONAB RecName: Full= (1028) 4741 699.6 1.5e-198 gi|73990671|ref|XP_534297.2| PREDICTED: similar to (1258) 4741 699.7 1.7e-198 gi|149018881|gb|EDL77522.1| rCG25679, isoform CRA_ ( 784) 4737 698.9 1.8e-198 gi|149018880|gb|EDL77521.1| rCG25679, isoform CRA_ (1028) 4737 699.0 2.2e-198 gi|149729916|ref|XP_001493107.1| PREDICTED: simila (1029) 4736 698.9 2.4e-198 gi|119599362|gb|EAW78956.1| hCG27481, isoform CRA_ ( 998) 4732 698.3 3.5e-198 gi|119599363|gb|EAW78957.1| hCG27481, isoform CRA_ (1029) 4732 698.3 3.6e-198 gi|114589671|ref|XP_516796.2| PREDICTED: U2-associ (1029) 4732 698.3 3.6e-198 gi|76608208|ref|XP_877060.1| PREDICTED: U2-associa (1029) 4730 698.0 4.4e-198 gi|109049190|ref|XP_001107114.1| PREDICTED: simila (1096) 4721 696.7 1.1e-197 gi|126338260|ref|XP_001372201.1| PREDICTED: simila (1034) 4674 689.9 1.2e-195 gi|224060102|ref|XP_002195693.1| PREDICTED: simila ( 965) 4608 680.3 8.9e-193 gi|126341354|ref|XP_001368859.1| PREDICTED: hypoth ( 984) 4379 647.1 8.8e-183 gi|197245900|gb|AAI68618.1| Unknown (protein for M ( 970) 4339 641.3 4.8e-181 gi|84201618|gb|AAI11693.1| SR140 protein [Homo sap ( 620) 3992 590.8 4.9e-166 gi|119599361|gb|EAW78955.1| hCG27481, isoform CRA_ ( 596) 3922 580.7 5.4e-163 gi|169153980|emb|CAQ14067.1| novel protein similar ( 923) 3219 479.0 3.3e-132 gi|47223423|emb|CAG04284.1| unnamed protein produc ( 964) 3035 452.4 3.6e-124 gi|210124409|gb|EEA72105.1| hypothetical protein B ( 697) 2335 350.8 9.9e-94 gi|148725524|emb|CAN88639.1| novel protein [Danio ( 874) 2311 347.4 1.3e-92 gi|210093465|gb|EEA41668.1| hypothetical protein B (1027) 2067 312.1 6.3e-82 gi|212508823|gb|EEB12404.1| conserved hypothetical ( 849) 1998 302.1 5.7e-79 gi|193643644|ref|XP_001946045.1| PREDICTED: simila ( 925) 1957 296.2 3.7e-77 gi|190658175|gb|EDV55388.1| GG22076 [Drosophila er ( 960) 1802 273.7 2.2e-70 gi|194194420|gb|EDX07996.1| GD11555 [Drosophila si ( 989) 1802 273.7 2.2e-70 gi|193911542|gb|EDW10409.1| GI21069 [Drosophila mo ( 936) 1799 273.3 2.9e-70 gi|7291222|gb|AAF46654.1| CG9346 [Drosophila melan ( 957) 1798 273.1 3.2e-70 gi|27819958|gb|AAL39666.2| LD23810p [Drosophila me ( 958) 1798 273.1 3.2e-70 gi|194177706|gb|EDW91317.1| GE12157 [Drosophila ya ( 960) 1798 273.1 3.2e-70 gi|194135038|gb|EDW56554.1| GM15794 [Drosophila se ( 957) 1796 272.8 4e-70 gi|108871595|gb|EAT35820.1| gar2, putative [Aedes ( 954) 1785 271.3 1.2e-69 gi|190620975|gb|EDV36499.1| GF11923 [Drosophila an ( 963) 1778 270.2 2.4e-69 gi|198137226|gb|EAL26483.2| GA21718 [Drosophila ps ( 956) 1773 269.5 4e-69 gi|194110783|gb|EDW32826.1| GL10142 [Drosophila pe ( 956) 1772 269.4 4.4e-69 gi|193902451|gb|EDW01318.1| GH20523 [Drosophila gr ( 969) 1771 269.2 4.9e-69 gi|194170878|gb|EDW85779.1| GK22959 [Drosophila wi ( 929) 1720 261.8 8e-67 gi|115649182|ref|XP_001179024.1| PREDICTED: hypoth (1012) 1677 255.6 6.4e-65 gi|157016612|gb|EAA10382.4| AGAP005006-PA [Anophel (1102) 1619 247.3 2.3e-62 gi|194144963|gb|EDW61359.1| GJ21992 [Drosophila vi ( 910) 1593 243.4 2.7e-61 gi|110768691|ref|XP_397019.3| PREDICTED: similar t ( 601) 1562 238.7 4.7e-60 gi|167877443|gb|EDS40826.1| U2-associated SR140 pr ( 603) 1494 228.9 4.3e-57 >>gi|171460908|ref|NP_080752.2| U2-associated SR140 prot (985 aa) initn: 4762 init1: 4762 opt: 4762 Z-score: 3737.8 bits: 702.6 E(): 1.7e-199 Smith-Waterman score: 4762; 100.000% identity (100.000% similar) in 712 aa overlap (1-712:274-985) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|171 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 430 440 450 460 470 480 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 490 500 510 520 530 540 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 550 560 570 580 590 600 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 610 620 630 640 650 660 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 670 680 690 700 710 720 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE 730 740 750 760 770 780 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 790 800 810 820 830 840 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 850 860 870 880 890 900 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 910 920 930 940 950 960 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|171 KKSRSQSRSPHRSHKKSKKNKH 970 980 >>gi|171460910|ref|NP_001108449.1| U2-associated SR140 p (1029 aa) initn: 4762 init1: 4762 opt: 4762 Z-score: 3737.6 bits: 702.6 E(): 1.8e-199 Smith-Waterman score: 4762; 100.000% identity (100.000% similar) in 712 aa overlap (1-712:318-1029) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|171 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|171 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>gi|109485108|ref|XP_001064961.1| PREDICTED: similar to (999 aa) initn: 4751 init1: 4751 opt: 4751 Z-score: 3729.1 bits: 701.0 E(): 5.3e-199 Smith-Waterman score: 4751; 99.719% identity (99.860% similar) in 712 aa overlap (1-712:288-999) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|109 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 320 330 340 350 360 370 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 380 390 400 410 420 430 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 440 450 460 470 480 490 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 500 510 520 530 540 550 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 560 570 580 590 600 610 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 620 630 640 650 660 670 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDAAEDSKKNEPIFKVAPSKWEAVDES 680 690 700 710 720 730 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|109 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEMTE 740 750 760 770 780 790 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 800 810 820 830 840 850 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 860 870 880 890 900 910 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 920 930 940 950 960 970 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|109 KKSRSQSRSPHRSHKKSKKNKH 980 990 >>gi|62654101|ref|XP_236501.3| PREDICTED: similar to U2- (1029 aa) initn: 4751 init1: 4751 opt: 4751 Z-score: 3728.9 bits: 701.0 E(): 5.4e-199 Smith-Waterman score: 4751; 99.719% identity (99.860% similar) in 712 aa overlap (1-712:318-1029) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|626 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|626 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDAAEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|626 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEMTE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|626 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>gi|148688989|gb|EDL20936.1| RIKEN cDNA 2610101N10 [Mus (1028 aa) initn: 4748 init1: 4748 opt: 4748 Z-score: 3726.6 bits: 700.6 E(): 7.2e-199 Smith-Waterman score: 4748; 99.719% identity (100.000% similar) in 712 aa overlap (1-712:317-1028) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|148 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::..::::::::::::::::::::::::::::::::::::::::::: gi|148 PAHVYYRWKLYSILQANSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|148 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>gi|13623693|gb|AAH06474.1|AAH06474 Unknown (protein fo (1027 aa) initn: 4746 init1: 4746 opt: 4746 Z-score: 3725.0 bits: 700.3 E(): 8.8e-199 Smith-Waterman score: 4746; 99.438% identity (99.860% similar) in 712 aa overlap (1-712:316-1027) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|136 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::..:: :: gi|136 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|136 SPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|136 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>gi|147668553|sp|O15042.2|SR140_HUMAN RecName: Full=U2- (1029 aa) initn: 4746 init1: 4746 opt: 4746 Z-score: 3725.0 bits: 700.3 E(): 8.9e-199 Smith-Waterman score: 4746; 99.438% identity (99.860% similar) in 712 aa overlap (1-712:318-1029) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|147 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::..:: :: gi|147 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|147 SPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|147 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>gi|45946398|gb|AAH68265.1| RIKEN cDNA 2610101N10 gene (985 aa) initn: 4744 init1: 4744 opt: 4744 Z-score: 3723.7 bits: 700.0 E(): 1.1e-198 Smith-Waterman score: 4744; 99.579% identity (99.860% similar) in 712 aa overlap (1-712:274-985) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::.:::::::::::::::::::: gi|459 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMSRRDAERALKNLNGKMIMSFE 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 MKLGWGRAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 430 440 450 460 470 480 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 490 500 510 520 530 540 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 550 560 570 580 590 600 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 610 620 630 640 650 660 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|459 LEDVDGIPIDATPIDDLDGVPIKSLDDDPDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 670 680 690 700 710 720 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE 730 740 750 760 770 780 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 790 800 810 820 830 840 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 850 860 870 880 890 900 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 910 920 930 940 950 960 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|459 KKSRSQSRSPHRSHKKSKKNKH 970 980 >>gi|146329994|sp|Q6NV83.2|SR140_MOUSE RecName: Full=U2- (1029 aa) initn: 4744 init1: 4744 opt: 4744 Z-score: 3723.5 bits: 700.0 E(): 1.1e-198 Smith-Waterman score: 4744; 99.579% identity (99.860% similar) in 712 aa overlap (1-712:318-1029) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::.:::::::::::::::::::: gi|146 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMSRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 MKLGWGRAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|146 LEDVDGIPIDATPIDDLDGVPIKSLDDDPDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|146 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>gi|75070608|sp|Q5R7X2.1|SR140_PONAB RecName: Full=U2-a (1028 aa) initn: 4741 init1: 4741 opt: 4741 Z-score: 3721.1 bits: 699.6 E(): 1.5e-198 Smith-Waterman score: 4741; 99.298% identity (99.860% similar) in 712 aa overlap (1-712:317-1028) 10 20 30 mKIAA0 RNCGFVAFMNRRDAERALKNLNGKMIMSFE :::::::::::::::::::::::::::::: gi|750 EMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFE 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKED 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQT 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA0 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 PAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEE 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA0 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 PSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTP 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA0 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFK 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA0 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAP 650 660 670 680 690 700 400 410 420 430 440 450 mKIAA0 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDES 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEATE :::::::::::::::::::::::::::::::::::::::::::::::::::::..:: :: gi|750 ELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTE 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREK 830 840 850 860 870 880 580 590 600 610 620 630 mKIAA0 EKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|750 EKELERERERDKKDKEKLESRSKDEKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSP 890 900 910 920 930 940 640 650 660 670 680 690 mKIAA0 SPKSERSERSERSHKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSG ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|750 SPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSG 950 960 970 980 990 1000 700 710 mKIAA0 KKSRSQSRSPHRSHKKSKKNKH :::::::::::::::::::::: gi|750 KKSRSQSRSPHRSHKKSKKNKH 1010 1020 712 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 03:01:16 2009 done: Sat Mar 14 03:09:09 2009 Total Scan time: 1044.030 Total Display time: 0.340 Function used was FASTA [version 34.26.5 April 26, 2007]