FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0784.ptfa, 1089 aa vs ./tmplib.26680 library 1767928 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.1620+/-0.00572; mu= 3.8925+/- 0.380 mean_var=233.4509+/-54.444, 0's: 0 Z-trim: 1 B-trim: 5 in 1/35 Lambda= 0.0839 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0863 ( 1208 res) mbg05774 (1208) 344 55 6.3e-08 >>mKIAA0863 ( 1208 res) mbg05774 (1208 aa) initn: 1300 init1: 341 opt: 344 Z-score: 234.7 bits: 55.3 E(): 6.3e-08 Smith-Waterman score: 974; 26.478% identity (39.064% ungapped) in 1167 aa overlap (1-820:63-1200) 10 20 30 mKIAA0 KKILSDIGLEYCKEHIEDFKQFEPNDFYLK : :: ::::. ::: ..:.:.:.:.. :. mKIAA0 GAPRAPRKISKMFQIPVQNLDNIRKVRKRVKGILVDIGLDSCKELMKDLKSFDPGEKYFY 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 NTTWEDVGLWDPSLTKNQDYRTKPFCCSACPFSSKFFSAYKSHFRNVHSEDFENRILLNC ::.: ::. :.:: : . :::::.::: : .:.: ... :.:.. : .. ...... : mKIAA0 NTSWGDVSPWEPSGKKAR-YRTKPYCCSLCRYSTKVLTSLKNHLHRYHEDEADQELMIPC 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA0 PYCTFNADKKTLETHIKIFHAPNSSAPSSSLSTFKDKNKNDGLKPKQADNVEQAVYYCKK : : :... ... :...:::: .. : ... . . : ...: . . : : mKIAA0 PNCPFSSQPRVVGKHFRMFHAPARKVQSYTVNILGET------KTSRSDVIS---FTCLK 160 170 180 190 200 160 170 180 190 200 mKIAA0 CTYRDPLYEIVRKHIYREHFQHVAAPYIA----KAGEK-SLNGAVSLGTNAREECNIHCK :.. . :: ..::. ::... :.. ..::. . . ::. . . .:: mKIAA0 CNFSNTLYYSMKKHVLVAHFNYLINSYFGLRTEETGEQPKASDPVSVDKILPFD-KYYCK 210 220 230 240 250 260 210 220 230 240 mKIAA0 RCLFMPKSYEALVQH----------------VIEDH-ERIGYQVTAMIGH---TNVVVP- .: . .: .::. : :: .: .: :. :. :....: mKIAA0 KCSAIASSQDALMYHILTSDAHRDLENKLRSVISEHIKRTGFLKQMHIAPKPVTHLALPP 270 280 290 300 310 320 250 260 270 mKIAA0 -RAKPLMLIAPK------PQDKKGMGL-----------------PPRIS----SLASGNV . : . : ::.... : :: . .:.:... mKIAA0 NSSAPSIAAPPPCFQLALPQNSQSSGTVQSVTVTPGTSGSLTHSPPTTAQSHVALVSSSL 330 340 350 360 370 380 280 290 300 mKIAA0 ----RSLPSQQM----------------VNRLSIP-----KPNLNSTGVNM------MSN :: :: :: .: : .:.:... : . mKIAA0 PVCQSSLSLQQSAPPPVFLSHSVALNQPVNTAVLPLTQPVGPVNKSVGTSILPVNQAMCS 390 400 410 420 430 440 310 320 mKIAA0 VH------------------------------------LQQNNYGVKSVGQSYGVG---- :. :: .. :: :::.. : mKIAA0 VNQAVRPGLLPLTKPMGPMNRPVGPAVLPMGPSVNSGVLQATSPGVISVGRAVPSGVLPA 450 460 470 480 490 500 330 340 350 mKIAA0 -------------------------QSVRLGLGGNAPVSIPQQSQSVK-QLLPSGNGRSF :: : .: .:: .:.: ..::.:. mKIAA0 GQVTPAGVIPGQTATSGVLPTGQVVQSSTLPVGQTAPSRGLPPGQTVPLRVLPAGQVVPS 510 520 530 540 550 560 360 370 380 390 mKIAA0 GL-GAEQRPPAAARYSLQTANTS------------LP------PGQVK-SPSVS-----Q :: ...: :... : .:.. :: :: .. ::::: . mKIAA0 GLLSSNQTVPSGVVPVNQGVNSGVLQLGQPVTPGVLPVGPPVRPGVLQLSPSVSTSILPM 570 580 590 600 610 620 400 410 mKIAA0 SQASR--------------VLGQ-------------------SSSKPPP-----AATGPP :: : .: : : . : : ::.::: mKIAA0 SQPVRAGTSQNTTFFTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPSGGGLAAVGPP 630 640 650 660 670 680 420 mKIAA0 P---------------------------------------------SNHCATQ--KWKIC : .:. : .:: : mKIAA0 PQVPVQFLPSGSGTQMGSSLPSLPSPQVLVSPAPSVFVQATPPLADANQALKQAKQWKTC 690 700 710 720 730 740 430 440 450 mKIAA0 TICNELFPENVYSVHFEKEHKA-------------------------------------- .:::::: :::.::.: :: mKIAA0 PVCNELFPSNVYQVHMEVAHKQSEAQLCQVCNELFPANVYQVHMEVAHKQSESKSSEKLE 750 760 770 780 790 800 460 470 480 490 500 510 mKIAA0 -EKVPAVANYIMKIHNFTSKCLYCNRYLPTDTLLNHMLIHGLSCPYCRSTFNDVEKMAAH ::. : : .. ... : .:: :. . . :..:.:.:::.: .: ::.::. .. : mKIAA0 PEKLAACAPFLKWMREKTVRCLSCKCLVSQEELMHHLLMHGLGCLFCPCTFHDVRGLVEH 810 820 830 840 850 860 520 530 540 550 560 mKIAA0 MRMVHIDEEMGPKTDSTLSFDLTLQ-QGSHTNIHLLVTTYNLRDAPAESVAY-------H : :. .. :. .:.: :. .:. :: : :. .: .: : mKIAA0 SRTKHLGKKRLSMDYSNRGFQLDLDANGNLLFPHLDFITILPREKLGEREVYLAILAGIH 870 880 890 900 910 920 570 580 590 600 610 620 mKIAA0 AQNNAPVPPK--PQPKVQEKADVPVKSSPQAAVPYKKDVGKTLCPLCFSILKGPISDALA ... .:: : :::.: : .: :. : ::.:.: . .:: mKIAA0 SKSLVPVYVKVRPQPEVAPK------------IPNKQ---KLTCPFCLSTFM--TADAYE 930 940 950 960 630 640 650 660 670 680 mKIAA0 HHLRERHQVIQTVHPVEKKLTYKCIHCLGVYTSNMTASTITLHLVHCRGVGKTQNGQDKT ::.:::.:. ::: . .. ..::::: ::::.::: ..:..::..::.. : ....: mKIAA0 LHLKERHHVMPTVHTMLRSPAFKCIHCCGVYTGNMTLGAIAVHLLRCRSAPK-DSSSDLQ 970 980 990 1000 1010 1020 690 700 710 720 mKIAA0 NAPSRLNQSPGLA-----------PVKRTYEQMEFPLLKKRKLEE-----DADSPSCFEE :. ...: : :::: . .. .: :: :::. : :. mKIAA0 VQPGFIESSELLMVNGDVIPESTFPVKRKLPEGHLGPEDQRDGEEPQLTLDADASSGSEK 1030 1040 1050 1060 1070 1080 730 740 750 760 mKIAA0 K-------------------PEEPVV--LALDPKGHEDDSYEARKSFLTKYFNKQPYPTR : : . :::::. .: ::: .:.:: ::...:::.: mKIAA0 GLGAVPLKRQKSEIRTEGSGPSEDSLQALALDPSKYEGRSYEEKKQFLRDYFHRRPYPSR 1090 1100 1110 1120 1130 1140 770 780 790 800 810 820 mKIAA0 REIEKLAASLWLWKSDIASHFSNKRKKCVRDCEKYKPGVLLGFNMKELNKVKHEMDFDAE .:.: :.. ::.:: :.:: :...: :.. . .::.:::::.:.::..:::...: mKIAA0 KEVELLSSLLWVWKIDVASFFGKRRYICMKAIKTHKPSVLLGFDMSELKNVKHRLNFGEC 1150 1160 1170 1180 1190 1200 830 840 850 860 870 880 mKIAA0 WLFENHDEKDSRVNASKTVDKKHNLGKEDDSFSDSFEHLEEESNGSGSPFDPVFEVEPKI mKIAA0 ESQKL 1089 residues in 1 query sequences 1767928 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:28:35 2006 done: Mon Mar 27 10:28:36 2006 Scan time: 1.050 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]