FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0845.ptfa, 1046 aa vs ./tmplib.26680 library 1767971 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 17.6919+/-0.00983; mu= -44.6788+/- 0.642 mean_var=872.7350+/-214.064, 0's: 0 Z-trim: 14 B-trim: 0 in 0/36 Lambda= 0.0434 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4148 ( 498 res) mpj02962 ( 498) 977 77 7.8e-15 mKIAA0975 ( 1480 res) mbg09869 (1480) 410 42 0.00089 >>mKIAA4148 ( 498 res) mpj02962 (498 aa) initn: 853 init1: 547 opt: 977 Z-score: 358.6 bits: 76.9 E(): 7.8e-15 Smith-Waterman score: 984; 43.218% identity (45.742% ungapped) in 435 aa overlap (36-463:70-487) 10 20 30 40 50 60 mKIAA0 APAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSWARTSV :::. :. .:: .:: : .:.:. mKIAA4 SSSYRRMFGGSGTSSRPSSNRSYVTTSTRTYSLGSALRPSTSRSLYSSSPGGAYVTRSSA 40 50 60 70 80 90 70 80 90 100 110 120 mKIAA0 SSVSASPSRFRGAASSTD-SL-DTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYIDKV . .: : .:.: :: :.... .. . .:: .:: ::::::.::::: mKIAA4 VRLRSSVPGVRLLQDSVDFSLADAINTEFKN------TRTNEKVELQELNDRFANYIDKV 100 110 120 130 140 150 130 140 150 160 170 180 mKIAA0 RQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQEHLL : :: .:. : .: :. : :.. .:.:::.:.::.: : .: ......:...: mKIAA4 RFLEQQNKILLAELEQLKGQ--GKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLA 160 170 180 190 200 210 190 200 210 220 230 240 mKIAA0 EDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRRHHQ ::: ..:..:.:: ::::::.. ... . ...: ::..:..:...:::: ..:.. :. mKIAA4 EDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHD 220 230 240 250 260 270 250 260 270 280 290 300 mKIAA0 EEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEWFRV ::. :: .::: . ..: .. :. : :.:.:::..: : :. :... ..:::.. mKIAA4 EEIQELQAQIQ-----EQHVQIDV-DVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKS 280 290 300 310 320 310 320 330 340 350 360 mKIAA0 RLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDRHQA .. :::::. :.::.:.:..: .:::::.:. : :..:::.:.:::::: :.:. mKIAA4 KFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAL 330 340 350 360 370 380 370 380 390 400 410 420 mKIAA0 DIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRIGF . :.:::.: .:..:..: : ::: .:::::::::::::::::::.::::::::: ::.. mKIAA4 EAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISL 390 400 410 420 430 440 430 440 450 460 470 mKIAA0 GPSP-FS---LTE-GLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGV : : :: : : .: ..: ..:: : .::.:: . ... mKIAA4 -PLPTFSSLNLRETNLESLPLVDTH--SKRTLLIKTVETRDGQVINETSQHHDDLE 450 460 470 480 490 480 490 500 510 520 530 mKIAA0 TEEEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAK >>mKIAA0975 ( 1480 res) mbg09869 (1480 aa) initn: 329 init1: 329 opt: 410 Z-score: 160.2 bits: 41.8 E(): 0.00089 Smith-Waterman score: 422; 35.751% identity (36.508% ungapped) in 193 aa overlap (543-732:907-1098) 520 530 540 550 560 570 mKIAA0 AEEAASPEKETKSRVKEEAKSPGEAKSPGEAKSPGEAKSPAEAKSPGEAKSPGEAKSPAE .:.:. ::: . :.. . ..::. mKIAA0 IFVLPHEKFHFLRVYNQLRASLQDLKTVVISKNPSAKPRNQPAKSRASAEQRLQ-ETPAD 880 890 900 910 920 930 580 590 600 610 620 630 mKIAA0 PKSPAEPKSPAEAKSPAEAKSP--ATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSP .:: : : .:::: .: : :..::: .. . :..:: :..:: :..:: :..: mKIAA0 APAPAAVPPTASAPAPAEALAPDLAPVQAPGEDRGLTSAEAPAAAEAPAAAEAPAAAEAP 940 950 960 970 980 990 640 650 660 670 680 690 mKIAA0 AEVKSPGEAKSPAEPKSPAEAKSPAEVKSPAEAKSPAEVKSPGEAKSPAAVKSPAEAKSP : ...:. :..:: ..:: :..:: ...:: :..:: ...:. :..:: ..:: :..: mKIAA0 AAAEAPAAAEAPAAAEAPAPAEAPAAAEAPAAAEAPAAAEAPASAEAPAPNQAPAPARGP 1000 1010 1020 1030 1040 1050 700 710 720 730 740 mKIAA0 AAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP-EKAKTPVKEGAKSPAEAKSPEKA : ...:. : .:. :.. :.:. ::. : ..: :. . : mKIAA0 APARGPAPAGGPAPAEALAQAEVPAQYPSERLIQSTSEENQIPSHLPVCPSLQHIARLRG 1060 1070 1080 1090 1100 1110 750 760 770 780 790 800 mKIAA0 KSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEAKHPTDIRP mKIAA0 RAIIDLFHNSIAEVENEELRHLLWSSVVFYQTPGLEVTACVLLSSKAVYFILHDGLRRYF 1120 1130 1140 1150 1160 1170 1046 residues in 1 query sequences 1767971 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:30:08 2006 done: Mon Mar 27 10:30:09 2006 Scan time: 1.100 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]