# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh00862.fasta.nr -Q ../query/mKIAA0845.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0845, 1046 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7874008 sequences Expectation_n fit: rho(ln(x))= 7.4412+/-0.000227; mu= 3.7952+/- 0.012 mean_var=267.5353+/-50.548, 0's: 40 Z-trim: 209 B-trim: 0 in 0/66 Lambda= 0.078412 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|94730399|sp|P19246.3|NFH_MOUSE RecName: Full=Ne (1090) 4935 572.9 3.1e-160 gi|200022|gb|AAA39809.1| neurofilament protein (1072) 4932 572.6 3.9e-160 gi|463250|emb|CAA83229.1| Neurofilament protein, h (1071) 4925 571.8 6.8e-160 gi|387493|gb|AAA39813.1| neurofilament largest sub (1087) 4866 565.1 7e-158 gi|158341642|ref|NP_036739.2| neurofilament, heavy (1064) 4746 551.5 8.4e-154 gi|83305012|sp|P16884.4|NFH_RAT RecName: Full=Neur (1072) 4629 538.3 8.1e-150 gi|2642598|gb|AAB87068.1| high molecular-weight ne (1072) 4628 538.2 8.8e-150 gi|116242677|sp|P12036.3|NFH_HUMAN RecName: Full=N (1026) 4613 536.4 2.8e-149 gi|6470331|gb|AAF13722.1|AF203032_1 neurofilament (1026) 4608 535.9 4.1e-149 gi|194380258|dbj|BAG63896.1| unnamed protein produ (1025) 4601 535.1 7.1e-149 gi|194674395|ref|XP_870725.3| PREDICTED: similar t (1023) 4550 529.3 3.9e-147 gi|119580209|gb|EAW59805.1| neurofilament, heavy p (1020) 4450 518.0 9.8e-144 gi|1841430|emb|CAA33366.1| heavy neurofilament sub (1020) 4443 517.2 1.7e-143 gi|24020878|gb|AAN40837.1|AF346625_1 heavy neurofi (1135) 4225 492.6 4.8e-136 gi|194043182|ref|XP_001928806.1| PREDICTED: simila (1075) 4174 486.8 2.5e-134 gi|194674393|ref|XP_607274.4| PREDICTED: similar t (1081) 4143 483.3 2.9e-133 gi|114685745|ref|XP_001134737.1| PREDICTED: neurof (1018) 4138 482.7 4.1e-133 gi|114685743|ref|XP_515058.2| PREDICTED: neurofila (1018) 4129 481.7 8.4e-133 gi|149261714|ref|XP_001474074.1| PREDICTED: simila ( 972) 4093 477.6 1.4e-131 gi|148708560|gb|EDL40507.1| neurofilament, heavy p ( 933) 4052 472.9 3.3e-130 gi|114685747|ref|XP_001134808.1| PREDICTED: neurof ( 966) 4026 470.0 2.6e-129 gi|149047587|gb|EDM00257.1| neurofilament, heavy p ( 923) 3885 454.0 1.6e-124 gi|57829|emb|CAA32038.1| heavy neurofilament polyp ( 854) 3249 382.0 7e-103 gi|119580210|gb|EAW59806.1| neurofilament, heavy p ( 587) 3226 379.2 3.4e-102 gi|126324953|ref|XP_001380169.1| PREDICTED: simila (1027) 3080 363.0 4.4e-97 gi|109093947|ref|XP_001109476.1| PREDICTED: simila ( 915) 3001 354.0 2e-94 gi|205686|gb|AAA41695.1| heavy neurofilament subun ( 795) 2256 269.7 4.4e-69 gi|21429606|gb|AAM49796.1| heavy neurofilament NF- ( 514) 2210 264.2 1.3e-67 gi|205680|gb|AAA41692.1| high molecular weight neu ( 514) 2199 262.9 3e-67 gi|118098848|ref|XP_415310.2| PREDICTED: similar t ( 890) 1901 229.6 5.8e-57 gi|119580208|gb|EAW59804.1| neurofilament, heavy p ( 309) 1769 214.0 9.7e-53 gi|134025638|gb|AAI36057.1| Nefh protein [Xenopus ( 838) 1750 212.4 7.7e-52 gi|119921890|ref|XP_001252037.1| PREDICTED: neurof ( 931) 1721 209.2 8e-51 gi|601930|gb|AAA57152.1| neurofilament-H ( 606) 1690 205.5 7.1e-50 gi|143811427|sp|O77788.3|NFM_BOVIN RecName: Full=N ( 926) 1689 205.6 9.8e-50 gi|224080825|ref|XP_002197538.1| PREDICTED: NF-M [ ( 851) 1665 202.8 6.1e-49 gi|128146|sp|P16053.2|NFM_CHICK RecName: Full=Neur ( 858) 1664 202.7 6.7e-49 gi|632549|gb|AAA80106.1| NF-180 (1110) 1654 201.8 1.7e-48 gi|601931|gb|AAA57153.1| neurofilament-H ( 511) 1634 199.0 5.2e-48 gi|161611936|gb|AAI55735.1| LOC794362 protein [Dan ( 849) 1618 197.5 2.4e-47 gi|128147|sp|P07197.2|NFM_HUMAN RecName: Full=Neur ( 916) 1617 197.5 2.8e-47 gi|67678152|gb|AAH96757.1| Neurofilament, medium p ( 916) 1615 197.2 3.2e-47 gi|157738649|ref|NP_005373.2| neurofilament, mediu ( 916) 1615 197.2 3.2e-47 gi|194041502|ref|XP_001925857.1| PREDICTED: simila ( 934) 1611 196.8 4.5e-47 gi|109085914|ref|XP_001106972.1| PREDICTED: neurof ( 919) 1595 195.0 1.5e-46 gi|126305451|ref|XP_001362944.1| PREDICTED: hypoth ( 904) 1579 193.1 5.4e-46 gi|3641350|gb|AAC36357.1| neurofilament-M subunit ( 810) 1566 191.6 1.4e-45 gi|149521469|ref|XP_001517087.1| PREDICTED: simila ( 696) 1547 189.4 5.7e-45 gi|145587034|gb|AAR88105.2| middle-weight neurofil ( 746) 1545 189.2 6.9e-45 gi|114619525|ref|XP_001150727.1| PREDICTED: neurof ( 925) 1545 189.3 7.8e-45 >>gi|94730399|sp|P19246.3|NFH_MOUSE RecName: Full=Neurof (1090 aa) initn: 5726 init1: 4536 opt: 4935 Z-score: 3033.0 bits: 572.9 E(): 3.1e-160 Smith-Waterman score: 6441; 94.862% identity (95.046% similar) in 1090 aa overlap (11-1046:1-1090) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW :::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 MMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP 480 490 500 510 520 530 550 560 570 580 590 mKIAA0 GEAKSPGEAKSPAEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSPAE---------- ::::::.:::::.::::::::::::::::::::::::::::::::::::: gi|947 GEAKSPAEAKSPGEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEPKSPATVKSP 540 550 560 570 580 590 600 mKIAA0 --------------------------------------------AKSPATVKSPGEAKSP :::::::::::::::: gi|947 GEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPATVKSPGEAKSP 600 610 620 630 640 650 610 620 630 640 650 660 mKIAA0 SEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAEVKSPAEAKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 SEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAEVKSPAEAKSP 660 670 680 690 700 710 670 680 690 700 710 720 mKIAA0 AEVKSPGEAKSPAAVKSPAEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 AEVKSPGEAKSPAAVKSPAEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP 720 730 740 750 760 770 730 740 750 760 770 780 mKIAA0 EKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 EKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPL 780 790 800 810 820 830 790 800 810 820 830 840 mKIAA0 DVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 DVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV 840 850 860 870 880 890 850 860 870 880 890 900 mKIAA0 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE 900 910 920 930 940 950 910 920 930 940 950 960 mKIAA0 AKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 AKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPK 960 970 980 990 1000 1010 970 980 990 1000 1010 1020 mKIAA0 KEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|947 KEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTD 1020 1030 1040 1050 1060 1070 1030 1040 mKIAA0 QKESQPPEKTTEDKATKGEK :::::::::::::::::::: gi|947 QKESQPPEKTTEDKATKGEK 1080 1090 >>gi|200022|gb|AAA39809.1| neurofilament protein gi| (1072 aa) initn: 4511 init1: 4511 opt: 4932 Z-score: 3031.3 bits: 572.6 E(): 3.9e-160 Smith-Waterman score: 6423; 95.989% identity (96.362% similar) in 1072 aa overlap (11-1046:1-1072) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW :::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 MMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP 480 490 500 510 520 530 550 560 570 580 590 mKIAA0 GEAKSPGEAKSPAEAKSPGEAKSP------GEAKSPAEPKSPAEPKSPAEAKSPAEAKSP :::::::::::::::::::::::: :::::::::::::::::::::::::: ::: gi|200 GEAKSPGEAKSPAEAKSPGEAKSPREAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEPKSP 540 550 560 570 580 590 600 610 620 630 mKIAA0 ATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAE------------------VKSP :::::::::::::::::::::::::::::::::::::: :::: gi|200 ATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPATVKSP 600 610 620 630 640 650 640 650 660 670 680 mKIAA0 GEAKSPAEPKSPAEAKSPAEVKSPAEAKSPAEVKSPGEAKSPA------------AVKSP ::::::.: :::::::::::.:::::::::::::::::::::: ::::: gi|200 GEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAAVKSP 660 670 680 690 700 710 690 700 710 720 730 740 mKIAA0 AEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEGAKSPAEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 AEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEGAKSPAEAK 720 730 740 750 760 770 750 760 770 780 790 800 mKIAA0 SPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEAKHP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::. : gi|200 SPEKAKSPVKEDIKPPAEAKSPEKAKSPMKEGAKPPEKAKPLDVKSPEAQTPVQEEANDP 780 790 800 810 820 830 810 820 830 840 850 860 mKIAA0 TDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPPKKVEEEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 TDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPPKKVEEEKT 840 850 860 870 880 890 870 880 890 900 910 920 mKIAA0 LPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 LPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEE 900 910 920 930 940 950 930 940 950 960 970 980 mKIAA0 TPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 TPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKT 960 970 980 990 1000 1010 990 1000 1010 1020 1030 1040 mKIAA0 TESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 TESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKG 1020 1030 1040 1050 1060 1070 mKIAA0 EK :: gi|200 EK >>gi|463250|emb|CAA83229.1| Neurofilament protein, high (1071 aa) initn: 4504 init1: 4504 opt: 4925 Z-score: 3027.0 bits: 571.8 E(): 6.8e-160 Smith-Waterman score: 6416; 95.985% identity (96.359% similar) in 1071 aa overlap (12-1046:1-1071) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW ::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 MSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW 10 20 30 40 70 80 90 100 110 120 mKIAA0 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA0 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA0 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP 470 480 490 500 510 520 550 560 570 580 590 mKIAA0 GEAKSPGEAKSPAEAKSPGEAKSP------GEAKSPAEPKSPAEPKSPAEAKSPAEAKSP :::::::::::::::::::::::: :::::::::::::::::::::::::: ::: gi|463 GEAKSPGEAKSPAEAKSPGEAKSPREAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEPKSP 530 540 550 560 570 580 600 610 620 630 mKIAA0 ATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAE------------------VKSP :::::::::::::::::::::::::::::::::::::: :::: gi|463 ATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPATVKSP 590 600 610 620 630 640 640 650 660 670 680 mKIAA0 GEAKSPAEPKSPAEAKSPAEVKSPAEAKSPAEVKSPGEAKSPA------------AVKSP ::::::.: :::::::::::.:::::::::::::::::::::: ::::: gi|463 GEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAAVKSP 650 660 670 680 690 700 690 700 710 720 730 740 mKIAA0 AEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEGAKSPAEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 AEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEGAKSPAEAK 710 720 730 740 750 760 750 760 770 780 790 800 mKIAA0 SPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEAKHP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::. : gi|463 SPEKAKSPVKEDIKPPAEAKSPEKAKSPMKEGAKPPEKAKPLDVKSPEAQTPVQEEANDP 770 780 790 800 810 820 810 820 830 840 850 860 mKIAA0 TDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPPKKVEEEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 TDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPPKKVEEEKT 830 840 850 860 870 880 870 880 890 900 910 920 mKIAA0 LPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 LPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEE 890 900 910 920 930 940 930 940 950 960 970 980 mKIAA0 TPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 TPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKT 950 960 970 980 990 1000 990 1000 1010 1020 1030 1040 mKIAA0 TESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 TESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKG 1010 1020 1030 1040 1050 1060 mKIAA0 EK :: gi|463 EK 1070 >>gi|387493|gb|AAA39813.1| neurofilament largest subunit (1087 aa) initn: 4419 init1: 3229 opt: 4866 Z-score: 2990.8 bits: 565.1 E(): 7e-158 Smith-Waterman score: 6357; 94.215% identity (94.582% similar) in 1089 aa overlap (12-1046:1-1087) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW ::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 MSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW 10 20 30 40 70 80 90 100 110 120 mKIAA0 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE :::::::::::::::::::::::. ::::::::::::::::::::::::::::::::::: gi|387 DKVRQLEAHNRSLEGEAAALRQQK-GRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|387 HLLEDIAHVRQRLDEEARQREEAEAAARALA-FAQEAEAARVELQKKAQALQEECGYLRR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|387 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSSLQSEEW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA0 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA0 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|387 EEDKEAQGQEGEEAEEGEEKEEEELAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP 470 480 490 500 510 520 550 560 570 580 590 mKIAA0 GEAKSPGEAKSPAEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSPAE---------- ::::::.:::::.::::::::::::::::::::::::::::::::::::: gi|387 GEAKSPAEAKSPGEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEPKSPATVKSP 530 540 550 560 570 580 600 mKIAA0 --------------------------------------------AKSPATVKSPGEAKSP :::::::::::::::: gi|387 GEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPATVKSPGEAKSP 590 600 610 620 630 640 610 620 630 640 650 660 mKIAA0 SEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAEVKSPAEAKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 SEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAEVKSPAEAKSP 650 660 670 680 690 700 670 680 690 700 710 720 mKIAA0 AEVKSPGEAKSPAAVKSPAEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 AEVKSPGEAKSPAAVKSPAEAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP 710 720 730 740 750 760 730 740 750 760 770 780 mKIAA0 EKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 EKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPL 770 780 790 800 810 820 790 800 810 820 830 840 mKIAA0 DVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV ::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|387 DVKSPEAQTPVQEEATVPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV 830 840 850 860 870 880 850 860 870 880 890 900 mKIAA0 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE 890 900 910 920 930 940 910 920 930 940 950 960 mKIAA0 AKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 AKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPK 950 960 970 980 990 1000 970 980 990 1000 1010 1020 mKIAA0 KEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|387 KEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTD 1010 1020 1030 1040 1050 1060 1030 1040 mKIAA0 QKESQPPEKTTEDKATKGEK :::::::::::::::::::: gi|387 QKESQPPEKTTEDKATKGEK 1070 1080 >>gi|158341642|ref|NP_036739.2| neurofilament, heavy pol (1064 aa) initn: 6732 init1: 2583 opt: 4746 Z-score: 2917.6 bits: 551.5 E(): 8.4e-154 Smith-Waterman score: 5667; 86.111% identity (91.574% similar) in 1080 aa overlap (11-1046:1-1064) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW :::::.::::::::::::::::::::.:::::: :::::::::::::::: gi|158 MMSFGGADALLGAPFAPLHGGGSLHYALSRKAGAGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 mKIAA0 ARTSVSSVSASPSRFRGA--ASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAG :::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|158 ARTSVSSVSASPSRFRGAGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAG 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 YIDKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 YIDKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLE 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 QEHLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QEHLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYL 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 RRHHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|158 RRHHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHTVQSTLQSE 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELE 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE ::::.:.:::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|158 DRHQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 CRIGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGV :::::::::::::::::::::.:::::::::: ::::::::::::::: :::::.::: : gi|158 CRIGFGPSPFSLTEGLPKIPSMSTHIKVKSEEKIKVVEKSEKETVIVEEQTEEIQVTEEV 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 TEEEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAK ::::::::::.: :::::: :. ::.::::::::::::::::: ::::::::.::: gi|158 TEEEDKEAQGEEEEEAEEGGEE-----AATTSPPAEEAASPEKETKSPVKEEAKSPAEAK 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 SPGEAKSPGEAKSPAEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEAKSPATVK ::.:::::.:::::::.:::. ::::.:.::::: ::::: :::::::::::.::::::: gi|158 SPAEAKSPAEAKSPAEVKSPAVAKSPAEVKSPAEVKSPAEAKSPAEAKSPAEVKSPATVK 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 SPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEAKSPAEVK ::::::::.:::::::.:::.:::::::::::: :::::::::::: :::::.:::: :: gi|158 SPGEAKSPAEAKSPAEVKSPVEAKSPAEAKSPASVKSPGEAKSPAEAKSPAEVKSPATVK 590 600 610 620 630 640 660 670 680 690 mKIAA0 SPAEAKSPAEVKSP------------------------GEAKSPAAVKSPAEAKSP---- ::.::::::::::: .::::::..::::::::: gi|158 SPVEAKSPAEVKSPVTVKSPAEAKSPVEVKSPASVKSPSEAKSPAGAKSPAEAKSPVVAK 650 660 670 680 690 700 700 710 720 730 mKIAA0 --------------AAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEG : .:::.:::::.:::::::::::::::::.:::::::::.::::: gi|158 SPAEAKSPAEAKPPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPVEVKSPEKAKSPVKEG 710 720 730 740 750 760 740 750 760 770 780 790 mKIAA0 AKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPEAQTP ::: :::::::::::::::.::::::.:::::::::.:: :: ::::: ::::::::.:: gi|158 AKSLAEAKSPEKAKSPVKEEIKPPAEVKSPEKAKSPMKEEAKSPEKAKTLDVKSPEAKTP 770 780 790 800 810 820 800 810 820 830 840 850 mKIAA0 VQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPP ..::::.:.::: ::::::::::.::::::::..: :::::::::::::: ::::::::: gi|158 AKEEAKRPADIRSPEQVKSPAKEEAKSPEKEETRT-EKVAPKKEEVKSPV-EEVKAKEPP 830 840 850 860 870 880 860 870 880 890 900 910 mKIAA0 KKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKK :::::::: :::::.:::::::::::: :::.::: : ::::::: .::::::: ::: gi|158 KKVEEEKTPATPKTEVKESKKDEAPKEAQKPKAEEK-EPLTEKPKDSPGEAKKEEAKEKK 890 900 910 920 930 940 920 930 940 950 960 970 mKIAA0 KAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEK :.: ::::::::::::::::::: :::.::::::::.: :::::::.:::::: gi|158 -AAAPEEETPAKLGVKEEAKPKEK-------AEDAKAKEPSKPSEKEKPKKEEVPAAPEK 950 960 970 980 990 980 990 1000 1010 1020 1030 mKIAA0 KDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKT :::::::::::.:::::::::::.::.::.: .:::::::::::::::::::.::: ::. gi|158 KDTKEEKTTESKKPEEKPKMEAKAKEEDKGLPQEPSKPKTEKAEKSSSTDQKDSQPSEKA 1000 1010 1020 1030 1040 1050 1040 mKIAA0 TEDKATKGEK ::::.::.: gi|158 PEDKAAKGDK 1060 >>gi|83305012|sp|P16884.4|NFH_RAT RecName: Full=Neurofil (1072 aa) initn: 7681 init1: 2160 opt: 4629 Z-score: 2846.0 bits: 538.3 E(): 8.1e-150 Smith-Waterman score: 5614; 85.046% identity (90.642% similar) in 1090 aa overlap (11-1046:1-1072) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW ::::::::::::::::::::::::::.:::::: :::::::::::::::: gi|833 MMSFGSADALLGAPFAPLHGGGSLHYALSRKAGAGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|833 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCV-AAVAARSEKEQLQALNDRFAGYI 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE :::::::::::.:::::::::::. ::::::::::::::::::::::::::::..::::: gi|833 DKVRQLEAHNRTLEGEAAALRQQK-GRAAMGELYEREVREMRGAVLRLGAARGHVRLEQE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|833 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|833 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHTVQSTLQSEEW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|833 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR ::.:.:::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|833 HQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA0 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE :::::::::::::::::::.:::::::::: ::::::::::::::: :::::.::: ::: gi|833 IGFGPSPFSLTEGLPKIPSMSTHIKVKSEEKIKVVEKSEKETVIVEEQTEEIQVTEEVTE 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA0 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP ::::::::.: :::::: :. ::.::::::::::::::::: ::::::::.::::: gi|833 EEDKEAQGEEEEEAEEGGEE-----AATTSPPAEEAASPEKETKSPVKEEAKSPAEAKSP 470 480 490 500 510 520 550 560 570 580 mKIAA0 GEAKSPGEAKSPAE------------AKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSP .:::::.::::::: ::::.:::::.:.::::: ::::: ::::::::: gi|833 AEAKSPAEAKSPAEVKSPAEVKSPAEAKSPAEAKSPAEVKSPAEVKSPAEAKSPAEAKSP 530 540 550 560 570 580 590 600 610 620 630 640 mKIAA0 AEAKSPATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSP ::.:::::::::::::::.:::::::.:::.:::::::::::: :::::::::::: ::: gi|833 AEVKSPATVKSPGEAKSPAEAKSPAEVKSPVEAKSPAEAKSPASVKSPGEAKSPAEAKSP 590 600 610 620 630 640 650 660 670 680 mKIAA0 AEAKSPAEVKSPAEAKSPAEVKSP------------------------GEAKSPAAVKSP ::.:::: ::::.::::::::::: .::::::..::: gi|833 AEVKSPATVKSPVEAKSPAEVKSPVTVKSPAEAKSPVEVKSPASVKSPSEAKSPAGAKSP 650 660 670 680 690 700 690 700 710 720 mKIAA0 AEAKSP------------------AAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP :::::: : .:::.:::::.:::::::::::::::::.::::: gi|833 AEAKSPVVAKSPAEAKSPAEAKPPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPVEVKSP 710 720 730 740 750 760 730 740 750 760 770 780 mKIAA0 EKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPL ::::.:::::::: :::::::::::::::.::::::.:::::::::.:: :: ::::: : gi|833 EKAKSPVKEGAKSLAEAKSPEKAKSPVKEEIKPPAEVKSPEKAKSPMKEEAKSPEKAKTL 770 780 790 800 810 820 790 800 810 820 830 840 mKIAA0 DVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV :::::::.::..::::.:.::: ::::::::::.::::::::..: :::::::::::::: gi|833 DVKSPEAKTPAKEEAKRPADIRSPEQVKSPAKEEAKSPEKEETRT-EKVAPKKEEVKSPV 830 840 850 860 870 880 850 860 870 880 890 900 mKIAA0 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE ::::::::::::::::: :::::.:::::::::::: :::.::: : ::::::: .: gi|833 -EEVKAKEPPKKVEEEKTPATPKTEVKESKKDEAPKEAQKPKAEEK-EPLTEKPKDSPGE 890 900 910 920 930 940 910 920 930 940 950 960 mKIAA0 AKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPK :::::: ::: :.: ::::::::::::::::::: :::.::::::::.: :::: gi|833 AKKEEAKEKK-AAAPEEETPAKLGVKEEAKPKEK-------AEDAKAKEPSKPSEKEKPK 950 960 970 980 990 970 980 990 1000 1010 1020 mKIAA0 KEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTD :::.:::::::::::::::::.:::::::::::.::.::.: .::::::::::::::::: gi|833 KEEVPAAPEKKDTKEEKTTESKKPEEKPKMEAKAKEEDKGLPQEPSKPKTEKAEKSSSTD 1000 1010 1020 1030 1040 1050 1030 1040 mKIAA0 QKESQPPEKTTEDKATKGEK ::.::: ::. ::::.::.: gi|833 QKDSQPSEKAPEDKAAKGDK 1060 1070 >>gi|2642598|gb|AAB87068.1| high molecular-weight neurof (1072 aa) initn: 7653 init1: 2160 opt: 4628 Z-score: 2845.4 bits: 538.2 E(): 8.8e-150 Smith-Waterman score: 5608; 84.954% identity (90.734% similar) in 1090 aa overlap (11-1046:1-1072) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW ::::::::::::::::::::::::::.:::::: :::::::::::::::: gi|264 MMSFGSADALLGAPFAPLHGGGSLHYALSRKAGAGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAGYI :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|264 ARTSVSSVSASPSRFRGAASSTDSLDTLSNGPEGCV-AAVAARSEKEQLQALNDRFAGYI 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 DKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQE :::::::::::.:::::::::::. ::::::::::::::::::::::::::::..::::: gi|264 DKVRQLEAHNRTLEGEAAALRQQK-GRAAMGELYEREVREMRGAVLRLGAARGHVRLEQE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 HLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEW :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|264 HHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHTVQSTLQSEEW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 FRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELEDR 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 HQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR ::.:.:::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|264 HQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA0 IGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTE :::::::::::::::::::.:::::::::: ::::::::::::::: :::::.::: ::: gi|264 IGFGPSPFSLTEGLPKIPSMSTHIKVKSEEKIKVVEKSEKETVIVEEQTEEIQVTEEVTE 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA0 EEDKEAQGQEGEEAEEGEEKEEEEGAAATSPPAEEAASPEKETKSRVKEEAKSPGEAKSP ::::::::.: :::::: :. ::.::::::::::::::::: ::::::::.::::: gi|264 EEDKEAQGEEEEEAEEGGEE-----AATTSPPAEEAASPEKETKSPVKEEAKSPAEAKSP 470 480 490 500 510 520 550 560 570 580 mKIAA0 GEAKSPGEAKSPAEAKSPGEAKSPGEAKSPAEPKSPAE---P---------KSPAEAKSP .:::::.:::::::.:::.:.:::.::::::: ::::: : ::::::::: gi|264 AEAKSPAEAKSPAEVKSPAEVKSPAEAKSPAEAKSPAEVKSPATVKSPAEAKSPAEAKSP 530 540 550 560 570 580 590 600 610 620 630 640 mKIAA0 AEAKSPATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSP ::.:::::::::::::::.:::::::.:::.:::::::::::: :::::::::::: ::: gi|264 AEVKSPATVKSPGEAKSPAEAKSPAEVKSPVEAKSPAEAKSPASVKSPGEAKSPAEAKSP 590 600 610 620 630 640 650 660 670 680 mKIAA0 AEAKSPAEVKSPAEAKSPAEVKSP------------------------GEAKSPAAVKSP ::.:::: ::::.::::::::::: .::::::..::: gi|264 AEVKSPATVKSPVEAKSPAEVKSPVTVKSPAEAKSPVEVKSPASVKSPSEAKSPAGAKSP 650 660 670 680 690 700 690 700 710 720 mKIAA0 AEAKSP------------------AAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSP :::::: : .:::.:::::.:::::::::::::::::.::::: gi|264 AEAKSPVVAKSPAEAKSPAEAKPPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPVEVKSP 710 720 730 740 750 760 730 740 750 760 770 780 mKIAA0 EKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPL ::::.:::::::: :::::::::::::::.::::::.:::::::::.:: :: ::::: : gi|264 EKAKSPVKEGAKSLAEAKSPEKAKSPVKEEIKPPAEVKSPEKAKSPMKEEAKSPEKAKTL 770 780 790 800 810 820 790 800 810 820 830 840 mKIAA0 DVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV :::::::.::..::::.:.::: ::::::::::.::::::::..: :::::::::::::: gi|264 DVKSPEAKTPAKEEAKRPADIRSPEQVKSPAKEEAKSPEKEETRT-EKVAPKKEEVKSPV 830 840 850 860 870 880 850 860 870 880 890 900 mKIAA0 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE ::::::::::::::::: :::::.:::::::::::: :::.::: : ::::::: .: gi|264 -EEVKAKEPPKKVEEEKTPATPKTEVKESKKDEAPKEAQKPKAEEK-EPLTEKPKDSPGE 890 900 910 920 930 940 910 920 930 940 950 960 mKIAA0 AKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPK :::::: ::: :.: ::::::::::::::::::: :::.::::::::.: :::: gi|264 AKKEEAKEKK-AAAPEEETPAKLGVKEEAKPKEK-------AEDAKAKEPSKPSEKEKPK 950 960 970 980 990 970 980 990 1000 1010 1020 mKIAA0 KEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTD :::.:::::::::::::::::.::::::::.::.::.::.: .::::::::::::::::: gi|264 KEEVPAAPEKKDTKEEKTTESKKPEEKPKMQAKAKEEDKGLPQEPSKPKTEKAEKSSSTD 1000 1010 1020 1030 1040 1050 1030 1040 mKIAA0 QKESQPPEKTTEDKATKGEK ::.::: ::. ::::.::.: gi|264 QKDSQPSEKAPEDKAAKGDK 1060 1070 >>gi|116242677|sp|P12036.3|NFH_HUMAN RecName: Full=Neuro (1026 aa) initn: 6230 init1: 2521 opt: 4613 Z-score: 2836.4 bits: 536.4 E(): 2.8e-149 Smith-Waterman score: 4935; 78.685% identity (87.324% similar) in 1065 aa overlap (11-1045:1-1026) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW :::::.::::::::::::::::::::.:.::.: :::::::::::::::: gi|116 MMSFGGADALLGAPFAPLHGGGSLHYALARKGGAGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 mKIAA0 ARTSVSSVSASPSRFRGA--ASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAG .::::::::::::::::: :::::::::::::::::.::....:::::::::::::::: gi|116 TRTSVSSVSASPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAG 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 YIDKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLE :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|116 YIDKVRQLEAHNRSLEGEAAALRQQQAGRSAMGELYEREVREMRGAVLRLGAARGQLRLE 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 QEHLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYL ::::::::::::::::.:::::::::::::::::::::::::::.::::::::::::::: gi|116 QEHLLEDIAHVRQRLDDEARQREEAEAAARALARFAQEAEAARVDLQKKAQALQEECGYL 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 RRHHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSE ::::::::::::::::: :::::: :::.::::::::::::::::::::::::::::::: gi|116 RRHHQEEVGELLGQIQGSGAAQAQMQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSE 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELE :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|116 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELE 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE :::::::::::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|116 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 CRIGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGV ::::::: :::: ::::::::.:::::::::: ::::::::::::::: :::: .::: : gi|116 CRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEV 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 TEEEDKEAQGQEGEEAEEGEEKEEEEGAAAT-SPPAEEAASPEKETKSRVKEEAKSPGEA ::::.:::. .::.: : :::.: : : : :::::::::::::.:: ::::::::.:: gi|116 TEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEA 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 KSPG--EAKSPGEAKSPAEAKSPG--EAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEAKS ::: :::::.:.::: .::::. ::::: ::::: . : :::::.::: .::: gi|116 KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKE----EAKSPAEVKSPEKAKS 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 PATVKSPGEAKSPSEAKSPAEAKSPA--EAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEA :: :::::.::::: .::::. ::::::::::: :: ::::::: ::: .: gi|116 PA----KEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSP--VKE--EAKSPAEVKSPEKA 590 600 610 620 630 660 670 680 690 700 mKIAA0 KSPAEVKSPAEAKSPAEVKSPGEAKSPAAVKSPAEAKSPAAVKSP--GEAKSPGEAKSP- :::.. ::::: :.::: .:::: ::::: .::: .::::: .:::: gi|116 KSPTK----EEAKSPEEAKSPEKAKSPEK----EEAKSPEKAKSPVKAEAKSPEKAKSPV 640 650 660 670 680 690 710 720 730 740 750 760 mKIAA0 -AEAKSPAEAKSPI--EVKSPEKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKS :::::: .::::. :.:::::::.:::: ::::::::::::::. : : .::: gi|116 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKE------EAKSPEKAKSPVKEEAKTPEKAKS 700 710 720 730 740 770 780 790 800 810 mKIAA0 P--EKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKE---- : :.:::: : :: ::::: ::::::::.::..:::. :.: . ::..:::.:: gi|116 PVKEEAKSP--EKAKSPEKAKTLDVKSPEAKTPAKEEARSPAD-KFPEKAKSPVKEEVKS 750 760 770 780 790 800 820 830 840 850 860 870 mKIAA0 --KAKSPEKEEAKTSEKVAPKKEEVKSPVKEE-----VKAKEPPKKVEEEKTLPTPKTEA ::::: ::.::. :: ::::::::::::: ::.::::::.::::. ::::: gi|116 PEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEE 810 820 830 840 850 860 880 890 900 910 920 930 mKIAA0 K-ESKKDEAPK-EAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLG : .:::.:::: :::::::::::: .::::.: .::::::: .:::. . :.:.:::. gi|116 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 870 880 890 900 910 920 940 950 960 970 980 990 mKIAA0 VKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKTTESRKP :::.::::::::..: : .:.::::::::.: ::: :::::::::::: ..:: gi|116 VKEDAKPKEKTEVAKKEPDDAKAKEPSKPAE----KKE---AAPEKKDTKEEK---AKKP 930 940 950 960 970 1000 1010 1020 1030 1040 mKIAA0 EEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKGEK ::::: :::.:::::.:::::::::.::::::::::::.:.::::.:::::.::. gi|116 EEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 980 990 1000 1010 1020 >>gi|6470331|gb|AAF13722.1|AF203032_1 neurofilament prot (1026 aa) initn: 6228 init1: 2521 opt: 4608 Z-score: 2833.4 bits: 535.9 E(): 4.1e-149 Smith-Waterman score: 4930; 78.592% identity (87.324% similar) in 1065 aa overlap (11-1045:1-1026) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW :::::.::::::::::::::::::::.:.::.: :::::::::::::::: gi|647 MMSFGGADALLGAPFAPLHGGGSLHYALARKGGAGGTRSAAGSSSGFHSW 10 20 30 40 50 70 80 90 100 110 mKIAA0 ARTSVSSVSASPSRFRGA--ASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAG .::::::::::::::::: :::::::::::::::::.::....:::::::::::::::: gi|647 TRTSVSSVSASPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAG 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 YIDKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLE :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|647 YIDKVRQLEAHNRSLEGEAAALRQQQAGRSAMGELYEREVREMRGAVLRLGAARGQLRLE 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 QEHLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYL ::::::::::::::::.:::::::::::::::::::::::::::.::::::::::::::: gi|647 QEHLLEDIAHVRQRLDDEARQREEAEAAARALARFAQEAEAARVDLQKKAQALQEECGYL 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 RRHHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSE ::::::::::::::::: :::::: :::.::::::::::::::::::::::::::::::: gi|647 RRHHQEEVGELLGQIQGSGAAQAQMQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSE 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELE :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|647 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELE 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE :::::::::::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|647 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 CRIGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGV ::::::: :::: ::::::::.:::::::::: ::::::::::::::: :::: .::: : gi|647 CRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEV 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 TEEEDKEAQGQEGEEAEEGEEKEEEEGAAAT-SPPAEEAASPEKETKSRVKEEAKSPGEA ::::.:::. .::.: : :::.: : : : :::::::::::::.:: ::::::::.:: gi|647 TEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEA 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 KSPG--EAKSPGEAKSPAEAKSPG--EAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEAKS ::: :::::.:.::: .::::. ::::: ::::: . : :::::.::: .::: gi|647 KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKE----EAKSPAEVKSPEKAKS 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 PATVKSPGEAKSPSEAKSPAEAKSPA--EAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEA :: :::::.::::: .::::. ::::::::::: :: ::::::: ::: .: gi|647 PA----KEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSP--VKE--EAKSPAEVKSPEKA 590 600 610 620 630 660 670 680 690 700 mKIAA0 KSPAEVKSPAEAKSPAEVKSPGEAKSPAAVKSPAEAKSPAAVKSP--GEAKSPGEAKSP- :::.. ::::: ..::: .:::: ::::: .::: .::::: .:::: gi|647 KSPTK----EEAKSPEKAKSPEKAKSPEK----EEAKSPEKAKSPVKAEAKSPEKAKSPV 640 650 660 670 680 690 710 720 730 740 750 760 mKIAA0 -AEAKSPAEAKSPI--EVKSPEKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKS :::::: .::::. :.:::::::.:::: ::::::::::::::. : : .::: gi|647 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKE------EAKSPEKAKSPVKEEAKTPEKAKS 700 710 720 730 740 770 780 790 800 810 mKIAA0 P--EKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKE---- : :.:::: : :: ::::: ::::::::.::..:::. :.: . ::..:::.:: gi|647 PVKEEAKSP--EKAKSPEKAKTLDVKSPEAKTPAKEEARSPAD-KFPEKAKSPVKEEVKS 750 760 770 780 790 800 820 830 840 850 860 870 mKIAA0 --KAKSPEKEEAKTSEKVAPKKEEVKSPVKEE-----VKAKEPPKKVEEEKTLPTPKTEA ::::: ::.::. :: ::::::::::::: ::.::::::.::::. ::::: gi|647 PEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEE 810 820 830 840 850 860 880 890 900 910 920 930 mKIAA0 K-ESKKDEAPK-EAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLG : .:::.:::: :::::::::::: .::::.: .::::::: .:::. . :.:.:::. gi|647 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 870 880 890 900 910 920 940 950 960 970 980 990 mKIAA0 VKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKTTESRKP :::.::::::::..: : .:.::::::::.: ::: :::::::::::: ..:: gi|647 VKEDAKPKEKTEVAKKEPDDAKAKEPSKPAE----KKE---AAPEKKDTKEEK---AKKP 930 940 950 960 970 1000 1010 1020 1030 1040 mKIAA0 EEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKGEK ::::: :::.:::::.:::::::::.::::::::::::.:.::::.:::::.::. gi|647 EEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 980 990 1000 1010 1020 >>gi|194380258|dbj|BAG63896.1| unnamed protein product [ (1025 aa) initn: 6228 init1: 2521 opt: 4601 Z-score: 2829.1 bits: 535.1 E(): 7.1e-149 Smith-Waterman score: 4923; 78.571% identity (87.312% similar) in 1064 aa overlap (12-1045:1-1025) 10 20 30 40 50 60 mKIAA0 APLAAAPAPAMMSFGSADALLGAPFAPLHGGGSLHYSLSRKAGPGGTRSAAGSSSGFHSW ::::.::::::::::::::::::::.:.::.: :::::::::::::::: gi|194 MSFGGADALLGAPFAPLHGGGSLHYALARKGGAGGTRSAAGSSSGFHSW 10 20 30 40 70 80 90 100 110 mKIAA0 ARTSVSSVSASPSRFRGA--ASSTDSLDTLSNGPEGCVVAAVAARSEKEQLQALNDRFAG .::::::::::::::::: :::::::::::::::::.::....:::::::::::::::: gi|194 TRTSVSSVSASPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAG 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 YIDKVRQLEAHNRSLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLE :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|194 YIDKVRQLEAHNRSLEGEAAALRQQQAGRSAMGELYEREVREMRGAVLRLGAARGQLRLE 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 QEHLLEDIAHVRQRLDEEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYL ::::::::::::::::.:::::::::::::::::::::::::::.::::::::::::::: gi|194 QEHLLEDIAHVRQRLDDEARQREEAEAAARALARFAQEAEAARVDLQKKAQALQEECGYL 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 RRHHQEEVGELLGQIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSE ::::::::::::::::: :::::: :::.::::::::::::::::::::::::::::::: gi|194 RRHHQEEVGELLGQIQGSGAAQAQMQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSE 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKESLERQRSELE :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|194 EWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELE 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE :::::::::::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|194 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 CRIGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGV ::::::: :::: ::::::::.:::::::::: ::::::::::::::: :::: .::: : gi|194 CRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEV 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 TEEEDKEAQGQEGEEAEEGEEKEEEEGAAAT-SPPAEEAASPEKETKSRVKEEAKSPGEA ::::.:::. .::.: : :::.: : : : :::::::::::::.:: ::::::::.:: gi|194 TEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEA 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 KSPG--EAKSPGEAKSPAEAKSPG--EAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEAKS ::: :::::.:.::: .::::. ::::: ::::: . : :::::.::: .::: gi|194 KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEK----EEAKSPAEVKSPEKAKS 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 PATVKSPGEAKSPSEAKSPAEAKSPA--EAKSPAEAKSPAEVKSPGEAKSPAEPKSPAEA :: :::::.::::: .::::. ::::::::::: :: ::::::: ::: .: gi|194 PAK----EEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSP--VKE--EAKSPAEVKSPEKA 590 600 610 620 630 660 670 680 690 700 mKIAA0 KSPAEVKSPAEAKSPAEVKSPGEAKSPAAVKSPAEAKSPAAVKSP--GEAKSPGEAKSP- :::.. ::::: ..::: .:::: ::::: .::: .::::: .:::: gi|194 KSPTK----EEAKSPEKAKSPEKAKSP----EKEEAKSPEKAKSPVKAEAKSPEKAKSPV 640 650 660 670 680 710 720 730 740 750 760 mKIAA0 -AEAKSPAEAKSPI--EVKSPEKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKS :::::: .::::. :.:::::::.:::: ::::::::::::::. : : .::: gi|194 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKE------EAKSPEKAKSPVKEEAKTPEKAKS 690 700 710 720 730 740 770 780 790 800 810 mKIAA0 P--EKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEAKHPTDIRPPEQVKSPAKE---- : :.:::: : :: ::::: ::::::::.::..:::. :.: . ::..:::.:: gi|194 PVKEEAKSP--EKAKSPEKAKTLDVKSPEAKTPAKEEARSPAD-KFPEKAKSPVKEEVKS 750 760 770 780 790 800 820 830 840 850 860 870 mKIAA0 --KAKSPEKEEAKTSEKVAPKKEEVKSPVKEE-----VKAKEPPKKVEEEKTLPTPKTEA ::::: ::.::. :: ::::::::::::: ::.::::::.::::. ::::: gi|194 PEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEE 810 820 830 840 850 860 880 890 900 910 920 930 mKIAA0 K-ESKKDEAPK-EAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLG : .:::.:::: :::::::::::: .::::.: .::::::: .:::. . :.:.:::. gi|194 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 870 880 890 900 910 920 940 950 960 970 980 990 mKIAA0 VKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKTTESRKP :::.::::::::..: : .:.::::::::.: ::: :::::::::::: ..:: gi|194 VKEDAKPKEKTEVAKKEPDDAKAKEPSKPAE----KKE---AAPEKKDTKEEK---AKKP 930 940 950 960 970 1000 1010 1020 1030 1040 mKIAA0 EEKPKMEAKVKEDDKSLSKEPSKPKTEKAEKSSSTDQKESQPPEKTTEDKATKGEK ::::: :::.:::::.:::::::::.::::::::::::.:.::::.:::::.::. gi|194 EEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 980 990 1000 1010 1020 1046 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 17:46:34 2009 done: Mon Mar 16 17:55:44 2009 Total Scan time: 1193.740 Total Display time: 0.650 Function used was FASTA [version 34.26.5 April 26, 2007]