# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh00801.fasta.nr -Q ../query/mKIAA1545.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1545, 488 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917595 sequences Expectation_n fit: rho(ln(x))= 6.3180+/-0.000194; mu= 7.2462+/- 0.011 mean_var=106.3000+/-20.391, 0's: 46 Z-trim: 55 B-trim: 0 in 0/66 Lambda= 0.124396 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148688073|gb|EDL20020.1| RIKEN cDNA 2410025L10, ( 574) 3273 597.8 2.4e-168 gi|223462681|gb|AAI51197.1| Unknown (protein for M ( 621) 3273 597.8 2.6e-168 gi|148688074|gb|EDL20021.1| RIKEN cDNA 2410025L10, (1012) 3273 598.0 3.8e-168 gi|217416345|ref|NP_001136114.1| AUTS2-like protei (1031) 3273 598.0 3.8e-168 gi|47124445|gb|AAH69994.1| 2410025L10Rik protein [ ( 476) 3189 582.7 7.2e-164 gi|149063720|gb|EDM14043.1| rCG21227, isoform CRA_ ( 916) 3144 574.8 3.3e-161 gi|109496207|ref|XP_222254.4| PREDICTED: similar t (1379) 3144 574.9 4.5e-161 gi|125347476|ref|NP_082872.2| AUTS2-like protein i ( 593) 2957 541.1 2.9e-151 gi|148688072|gb|EDL20019.1| RIKEN cDNA 2410025L10, ( 988) 2957 541.3 4.4e-151 gi|149063721|gb|EDM14044.1| rCG21227, isoform CRA_ ( 892) 2828 518.1 3.8e-144 gi|109497563|ref|XP_001080689.1| PREDICTED: simila ( 576) 2824 517.2 4.4e-144 gi|26327773|dbj|BAC27627.1| unnamed protein produc ( 603) 2118 390.5 6.3e-106 gi|73994943|ref|XP_852265.1| PREDICTED: hypothetic (1558) 1761 326.8 2.6e-86 gi|194674598|ref|XP_001253535.2| PREDICTED: simila ( 549) 1556 289.7 1.4e-75 gi|29468246|gb|AAO85466.1| XTP9 [Homo sapiens] ( 667) 1400 261.7 4.2e-67 gi|172045935|sp|Q9HCM7.3|AUT2L_HUMAN RecName: Full ( 972) 1400 261.8 5.7e-67 gi|217416343|ref|NP_001136113.1| fibrosin-like 1 [ (1045) 1400 261.9 6e-67 gi|126323919|ref|XP_001378040.1| PREDICTED: simila (1025) 1175 221.5 8.5e-55 gi|224071805|ref|XP_002195084.1| PREDICTED: hypoth (1159) 1086 205.5 6e-50 gi|149581454|ref|XP_001521595.1| PREDICTED: simila (1002) 1037 196.7 2.4e-47 gi|118098411|ref|XP_415087.2| PREDICTED: similar t (1358) 1032 195.9 5.6e-47 gi|224075694|ref|XP_002188698.1| PREDICTED: autism (1046) 858 164.6 1.1e-37 gi|194043592|ref|XP_001927303.1| PREDICTED: simila ( 287) 849 162.6 1.3e-37 gi|118100039|ref|XP_415729.2| PREDICTED: similar t (1251) 850 163.2 3.6e-37 gi|40555743|gb|AAH64693.1| AUTS2 protein [Homo sap (1235) 808 155.7 6.6e-35 gi|194218950|ref|XP_001914821.1| PREDICTED: autism (1158) 798 153.9 2.2e-34 gi|27817314|emb|CAD61164.1| novel protein similar ( 994) 792 152.7 4.1e-34 gi|189524331|ref|XP_684927.3| PREDICTED: similar t (1415) 792 152.8 5.4e-34 gi|109066363|ref|XP_001089340.1| PREDICTED: simila (1066) 790 152.4 5.5e-34 gi|194384724|dbj|BAG59522.1| unnamed protein produ ( 711) 787 151.7 5.8e-34 gi|114613850|ref|XP_519135.2| PREDICTED: autism su (1216) 790 152.4 6.1e-34 gi|119628300|gb|EAX07895.1| autism susceptibility ( 801) 787 151.8 6.4e-34 gi|73957669|ref|XP_536837.2| PREDICTED: hypothetic (1014) 788 152.0 6.8e-34 gi|126314127|ref|XP_001365993.1| PREDICTED: simila (1273) 789 152.3 7.2e-34 gi|41472654|gb|AAS07468.1| unknown [Homo sapiens] (1011) 787 151.8 7.7e-34 gi|23396464|sp|Q8WXX7.1|AUTS2_HUMAN RecName: Full= (1259) 787 151.9 9.1e-34 gi|18204838|gb|AAH21509.1| Auts2 protein [Mus musc ( 792) 780 150.5 1.5e-33 gi|148687509|gb|EDL19456.1| mCG121910, isoform CRA ( 811) 780 150.5 1.5e-33 gi|148687511|gb|EDL19458.1| mCG121910, isoform CRA (1068) 780 150.6 1.9e-33 gi|37046711|gb|AAH58110.1| Auts2 protein [Mus musc ( 626) 776 149.7 2.1e-33 gi|124486586|ref|NP_796021.2| autism susceptibilit (1261) 780 150.7 2.2e-33 gi|47227693|emb|CAG09690.1| unnamed protein produc (1096) 670 130.9 1.7e-27 gi|148726446|emb|CAN88581.1| novel protein similar ( 867) 595 117.3 1.6e-23 gi|189518871|ref|XP_685505.3| PREDICTED: similar t (1011) 595 117.4 1.8e-23 gi|125837119|ref|XP_692947.2| PREDICTED: similar t ( 741) 542 107.8 1e-20 gi|189528811|ref|XP_001921311.1| PREDICTED: simila ( 741) 536 106.7 2.2e-20 gi|109099593|ref|XP_001117851.1| PREDICTED: simila ( 99) 510 101.4 1.1e-19 gi|149067723|gb|EDM17275.1| rCG40094, isoform CRA_ ( 465) 504 100.8 8.1e-19 gi|149067724|gb|EDM17276.1| rCG40094, isoform CRA_ ( 466) 504 100.8 8.1e-19 gi|148685596|gb|EDL17543.1| mCG142079, isoform CRA ( 448) 501 100.3 1.1e-18 >>gi|148688073|gb|EDL20020.1| RIKEN cDNA 2410025L10, iso (574 aa) initn: 3271 init1: 2655 opt: 3273 Z-score: 3178.6 bits: 597.8 E(): 2.4e-168 Smith-Waterman score: 3273; 96.933% identity (97.546% similar) in 489 aa overlap (1-488:86-574) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH :::::::::::::::::::::::::::::: gi|148 QFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVRKPGKWCAVH 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: . gi|148 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTGA 120 130 140 150 160 170 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|148 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 180 190 200 210 220 230 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE 240 250 260 270 280 290 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG 300 310 320 330 340 350 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 360 370 380 390 400 410 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD 420 430 440 450 460 470 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP 480 490 500 510 520 530 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR ::::::::::::::::::::::::::::::::::::::: gi|148 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR 540 550 560 570 >>gi|223462681|gb|AAI51197.1| Unknown (protein for MGC:1 (621 aa) initn: 3271 init1: 2655 opt: 3273 Z-score: 3178.1 bits: 597.8 E(): 2.6e-168 Smith-Waterman score: 3273; 96.933% identity (97.546% similar) in 489 aa overlap (1-488:133-621) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH :::::::::::::::::::::::::::::: gi|223 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVRKPGKWCAVH 110 120 130 140 150 160 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: . gi|223 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTGA 170 180 190 200 210 220 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|223 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 230 240 250 260 270 280 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE 290 300 310 320 330 340 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG 350 360 370 380 390 400 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 410 420 430 440 450 460 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD 470 480 490 500 510 520 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP 530 540 550 560 570 580 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR ::::::::::::::::::::::::::::::::::::::: gi|223 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR 590 600 610 620 >>gi|148688074|gb|EDL20021.1| RIKEN cDNA 2410025L10, iso (1012 aa) initn: 3271 init1: 2655 opt: 3273 Z-score: 3175.1 bits: 598.0 E(): 3.8e-168 Smith-Waterman score: 3273; 96.933% identity (97.546% similar) in 489 aa overlap (1-488:524-1012) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH :::::::::::::::::::::::::::::: gi|148 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVRKPGKWCAVH 500 510 520 530 540 550 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: . gi|148 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTGA 560 570 580 590 600 610 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|148 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 620 630 640 650 660 670 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE 680 690 700 710 720 730 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG 740 750 760 770 780 790 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 800 810 820 830 840 850 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD 860 870 880 890 900 910 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP 920 930 940 950 960 970 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR ::::::::::::::::::::::::::::::::::::::: gi|148 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR 980 990 1000 1010 >>gi|217416345|ref|NP_001136114.1| AUTS2-like protein is (1031 aa) initn: 3271 init1: 2655 opt: 3273 Z-score: 3175.0 bits: 598.0 E(): 3.8e-168 Smith-Waterman score: 3273; 96.933% identity (97.546% similar) in 489 aa overlap (1-488:543-1031) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH :::::::::::::::::::::::::::::: gi|217 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVRKPGKWCAVH 520 530 540 550 560 570 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: . gi|217 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTGA 580 590 600 610 620 630 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|217 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 640 650 660 670 680 690 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE 700 710 720 730 740 750 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG 760 770 780 790 800 810 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 820 830 840 850 860 870 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD 880 890 900 910 920 930 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP 940 950 960 970 980 990 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR ::::::::::::::::::::::::::::::::::::::: gi|217 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR 1000 1010 1020 1030 >>gi|47124445|gb|AAH69994.1| 2410025L10Rik protein [Mus (476 aa) initn: 3187 init1: 2655 opt: 3189 Z-score: 3098.2 bits: 582.7 E(): 7.2e-164 Smith-Waterman score: 3189; 96.849% identity (97.479% similar) in 476 aa overlap (14-488:1-476) 10 20 30 40 50 60 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVHVQIAWQIYHQQQKMKMQLDPHKLEVGTKLD ::::::::::::::::::::::::::::::::::::::::::::::: gi|471 DPYRTAVRKPGKWCAVHVQIAWQIYHQQQKMKMQLDPHKLEVGTKLD 10 20 30 40 70 80 90 100 110 mKIAA1 LFSRPPAPGMFSGFHYPQDLARPLFSSTVGDLVSPHP-GIPHHWDSHLPTGHLTDPFSRS :::::::::::::::::::::::::::: . . .: : : : ::::::::::::: gi|471 LFSRPPAPGMFSGFHYPQDLARPLFSSTGATHPTANPFGPSAHHGSFLPTGHLTDPFSRS 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA1 STFGGLGSLSNHAFGGLGSHALTPGSSIFAPKEGTALLGLPSPHDAWNRLHRVPPSFPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 STFGGLGSLSNHAFGGLGSHALTPGSSIFAPKEGTALLGLPSPHDAWNRLHRVPPSFPTP 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 PPWPKPVDTERLSALTNHDREPDKGQEEHERDLLEKTRLLSHGSPVAPVGHPISSLLQRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 PPWPKPVDTERLSALTNHDREPDKGQEEHERDLLEKTRLLSHGSPVAPVGHPISSLLQRG 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 SGELSRPGVLTEREAETRVKESHSPSKEDGAKLAARPPSPYCKAALGDCLRLAGLLGRES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 SGELSRPGVLTEREAETRVKESHSPSKEDGAKLAARPPSPYCKAALGDCLRLAGLLGRES 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 GKQTPDRPQGDVKVKEERREDETPDLTGVSVHSTATHMGLGTAGFVWDPPRDTYRGLELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 GKQTPDRPQGDVKVKEERREDETPDLTGVSVHSTATHMGLGTAGFVWDPPRDTYRGLELP 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 RRSFPAPPPAAGPSPFELSERAYRDREPHDYSPERLQEVRREELERARVPDSDAAALLPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 RRSFPAPPPAAGPSPFELSERAYRDREPHDYSPERLQEVRREELERARVPDSDAAALLPA 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 VHYPRLAPGALHGALLARTPPAAAVLGAPPPLVTAGGVPTPPAHPRTTLGPGEAREYSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 VHYPRLAPGALHGALLARTPPAAAVLGAPPPLVTAGGVPTPPAHPRTTLGPGEAREYSPA 410 420 430 440 450 460 480 mKIAA1 CNPPEVEAR ::::::::: gi|471 CNPPEVEAR 470 >>gi|149063720|gb|EDM14043.1| rCG21227, isoform CRA_a [R (916 aa) initn: 2308 init1: 2083 opt: 3144 Z-score: 3050.6 bits: 574.8 E(): 3.3e-161 Smith-Waterman score: 3144; 92.683% identity (96.138% similar) in 492 aa overlap (1-488:426-916) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH :::::::::::::::::::::::::::::: gi|149 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVRKPGKWCAVH 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: . gi|149 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAQGMFSGFHYPQDLARPLFSSTGA 460 470 480 490 500 510 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|149 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 520 530 540 550 560 570 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPMDTERLSALTNHDREPDKGQEEHE 580 590 600 610 620 630 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :.:::::::::::::.::::::::::::: :::::::::::::::::::::.:::::::: gi|149 RNLLEKTRLLSHGSPIAPVGHPISSLLQRDSGELSRPGVLTEREAETRVKENHSPSKEDG 640 650 660 670 680 690 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 700 710 720 730 740 750 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::.::::.::::::::::::::.:::::::::::::::.::::::::::::: :: gi|149 VHSTATHLGLGTSGFVWDPPRDTYRGLDLPRRSFPAPPPAAGPAPFELSERAYRDRESHD 760 770 780 790 800 810 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP ::::::.:::::::::::.:::::: ::::.:::::::::::::::::::::::.::::: gi|149 YSPERLREVRREELERARAPDSDAA-LLPAMHYPRLAPGALHGALLARTPPAAAALGAPP 820 830 840 850 860 870 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTT---LGPGEAREYSPACNPPEVEAR :::::::::::::.:::: :::::::.::::::::::::: gi|149 PLVTAGGVPTPPARPRTTPLALGPGEARDYSPACNPPEVEAR 880 890 900 910 >>gi|109496207|ref|XP_222254.4| PREDICTED: similar to au (1379 aa) initn: 2325 init1: 2083 opt: 3144 Z-score: 3048.1 bits: 574.9 E(): 4.5e-161 Smith-Waterman score: 3144; 92.683% identity (96.138% similar) in 492 aa overlap (1-488:889-1379) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH :::::::::::::::::::::::::::::: gi|109 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVRKPGKWCAVH 860 870 880 890 900 910 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: . gi|109 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAQGMFSGFHYPQDLARPLFSSTGA 920 930 940 950 960 970 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|109 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 980 990 1000 1010 1020 1030 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPMDTERLSALTNHDREPDKGQEEHE 1040 1050 1060 1070 1080 1090 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :.:::::::::::::.::::::::::::: :::::::::::::::::::::.:::::::: gi|109 RNLLEKTRLLSHGSPIAPVGHPISSLLQRDSGELSRPGVLTEREAETRVKENHSPSKEDG 1100 1110 1120 1130 1140 1150 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 1160 1170 1180 1190 1200 1210 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::.::::.::::::::::::::.:::::::::::::::.::::::::::::: :: gi|109 VHSTATHLGLGTSGFVWDPPRDTYRGLDLPRRSFPAPPPAAGPAPFELSERAYRDRESHD 1220 1230 1240 1250 1260 1270 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP ::::::.:::::::::::.:::::: ::::.:::::::::::::::::::::::.::::: gi|109 YSPERLREVRREELERARAPDSDAA-LLPAMHYPRLAPGALHGALLARTPPAAAALGAPP 1280 1290 1300 1310 1320 1330 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTT---LGPGEAREYSPACNPPEVEAR :::::::::::::.:::: :::::::.::::::::::::: gi|109 PLVTAGGVPTPPARPRTTPLALGPGEARDYSPACNPPEVEAR 1340 1350 1360 1370 >>gi|125347476|ref|NP_082872.2| AUTS2-like protein isofo (593 aa) initn: 2951 init1: 2655 opt: 2957 Z-score: 2871.9 bits: 541.1 E(): 2.9e-151 Smith-Waterman score: 3030; 92.025% identity (92.638% similar) in 489 aa overlap (1-488:129-593) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH ::::::::::::::::::::: gi|125 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVR--------- 100 110 120 130 140 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG ::::::::::::::::::::::::::::::::::::::::::: . gi|125 ---------------MQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTGA 150 160 170 180 190 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|125 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 200 210 220 230 240 250 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE 260 270 280 290 300 310 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG 320 330 340 350 360 370 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 380 390 400 410 420 430 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD 440 450 460 470 480 490 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP 500 510 520 530 540 550 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR ::::::::::::::::::::::::::::::::::::::: gi|125 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR 560 570 580 590 >>gi|148688072|gb|EDL20019.1| RIKEN cDNA 2410025L10, iso (988 aa) initn: 2951 init1: 2655 opt: 2957 Z-score: 2868.8 bits: 541.3 E(): 4.4e-151 Smith-Waterman score: 3030; 92.025% identity (92.638% similar) in 489 aa overlap (1-488:524-988) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH ::::::::::::::::::::: gi|148 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVR--------- 500 510 520 530 540 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG ::::::::::::::::::::::::::::::::::::::::::: . gi|148 ---------------MQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTGA 550 560 570 580 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|148 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 590 600 610 620 630 640 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE 650 660 670 680 690 700 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG 710 720 730 740 750 760 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 770 780 790 800 810 820 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD 830 840 850 860 870 880 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP 890 900 910 920 930 940 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR ::::::::::::::::::::::::::::::::::::::: gi|148 PLVTAGGVPTPPAHPRTTLGPGEAREYSPACNPPEVEAR 950 960 970 980 >>gi|149063721|gb|EDM14044.1| rCG21227, isoform CRA_b [R (892 aa) initn: 2397 init1: 2083 opt: 2828 Z-score: 2744.3 bits: 518.1 E(): 3.8e-144 Smith-Waterman score: 2901; 87.805% identity (91.260% similar) in 492 aa overlap (1-488:426-892) 10 20 30 mKIAA1 AVHTFLQKAPGVSDPYRTAVRKPGKWCAVH ::::::::::::::::::::: gi|149 PFDKFSPKLDSPYFRHSNTSNSIEITGRSSAVHTFLQKAPGVSDPYRTAVR--------- 400 410 420 430 440 40 50 60 70 80 90 mKIAA1 VQIAWQIYHQQQKMKMQLDPHKLEVGTKLDLFSRPPAPGMFSGFHYPQDLARPLFSSTVG :::::::::::::::::::::: :::::::::::::::::::: . gi|149 ---------------MQLDPHKLEVGTKLDLFSRPPAQGMFSGFHYPQDLARPLFSSTGA 450 460 470 480 490 100 110 120 130 140 mKIAA1 DLVSPHP-GIPHHWDSHLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA . .: : : : ::::::::::::::::::::::::::::::::::::::::::: gi|149 THPTANPFGPSAHHGSFLPTGHLTDPFSRSSTFGGLGSLSNHAFGGLGSHALTPGSSIFA 500 510 520 530 540 550 150 160 170 180 190 200 mKIAA1 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPVDTERLSALTNHDREPDKGQEEHE ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 PKEGTALLGLPSPHDAWNRLHRVPPSFPTPPPWPKPMDTERLSALTNHDREPDKGQEEHE 560 570 580 590 600 610 210 220 230 240 250 260 mKIAA1 RDLLEKTRLLSHGSPVAPVGHPISSLLQRGSGELSRPGVLTEREAETRVKESHSPSKEDG :.:::::::::::::.::::::::::::: :::::::::::::::::::::.:::::::: gi|149 RNLLEKTRLLSHGSPIAPVGHPISSLLQRDSGELSRPGVLTEREAETRVKENHSPSKEDG 620 630 640 650 660 670 270 280 290 300 310 320 mKIAA1 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKLAARPPSPYCKAALGDCLRLAGLLGRESGKQTPDRPQGDVKVKEERREDETPDLTGVS 680 690 700 710 720 730 330 340 350 360 370 380 mKIAA1 VHSTATHMGLGTAGFVWDPPRDTYRGLELPRRSFPAPPPAAGPSPFELSERAYRDREPHD :::::::.::::.::::::::::::::.:::::::::::::::.::::::::::::: :: gi|149 VHSTATHLGLGTSGFVWDPPRDTYRGLDLPRRSFPAPPPAAGPAPFELSERAYRDRESHD 740 750 760 770 780 790 390 400 410 420 430 440 mKIAA1 YSPERLQEVRREELERARVPDSDAAALLPAVHYPRLAPGALHGALLARTPPAAAVLGAPP ::::::.:::::::::::.:::::: ::::.:::::::::::::::::::::::.::::: gi|149 YSPERLREVRREELERARAPDSDAA-LLPAMHYPRLAPGALHGALLARTPPAAAALGAPP 800 810 820 830 840 850 450 460 470 480 mKIAA1 PLVTAGGVPTPPAHPRTT---LGPGEAREYSPACNPPEVEAR :::::::::::::.:::: :::::::.::::::::::::: gi|149 PLVTAGGVPTPPARPRTTPLALGPGEARDYSPACNPPEVEAR 860 870 880 890 488 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 19:25:05 2009 done: Sat Mar 14 19:32:08 2009 Total Scan time: 949.730 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]