FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00147.ptfa, 982 aa vs ./tmplib.26680 library 1768035 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.4812+/-0.00515; mu= 14.6332+/- 0.346 mean_var=139.2040+/-32.481, 0's: 0 Z-trim: 10 B-trim: 0 in 0/36 Lambda= 0.1087 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4202 ( 520 res) mpj00623 ( 520) 201 44 8e-05 mKIAA1515 ( 660 res) mph00995 ( 660) 162 38 0.0064 >>mKIAA4202 ( 520 res) mpj00623 (520 aa) initn: 224 init1: 98 opt: 201 Z-score: 178.9 bits: 43.6 E(): 8e-05 Smith-Waterman score: 202; 29.032% identity (34.091% ungapped) in 155 aa overlap (78-214:354-503) 50 60 70 80 90 100 mFLJ00 EGSCHSDQMSNDFSTDDAVDEGICLESSSGSEKIS-KPGLEKN--SLMYELFSVMVHSG- ::... .: .:.. :..::: .:..: : mKIAA4 LPCTLNLQLMRFVFDRQTGHKKKLNAYIGFSESLDMEPYVEHKGGSFVYELSAVLIHRGV 330 340 350 360 370 380 110 120 130 140 150 mFLJ00 SAAGGHYYACIKSFSDDQWYSFNDQHVSRIT--------QEDIKKTHGGSSGSRGYYSSA :: .::: : .:. .. .::.:::. . .. .::.. .. :. . ... mKIAA4 SAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQLGIEEDLEPSK--SQTRKPKCGKG 390 400 410 420 430 440 160 170 180 190 200 mFLJ00 FASSTNAYMLIYRLKDPTRNAKFLEVDEYPEHIKNLVQKER-ELEEQ-----EKRQREIE : :::::.:::. .: ...: : ...::... ..:: : :.. .. mKIAA4 THCSRNAYMLVYRLQAQEKNHTMVQV---PAFLQELVDRDNSKFEEWCVEMAEMRKQSVD 450 460 470 480 490 210 220 230 240 250 260 mFLJ00 RNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVKYDE .. : mKIAA4 KGKAKHEEVKELYQRLPAGAGL 500 510 520 >>mKIAA1515 ( 660 res) mph00995 (660 aa) initn: 164 init1: 100 opt: 162 Z-score: 144.7 bits: 37.7 E(): 0.0064 Smith-Waterman score: 164; 26.768% identity (30.814% ungapped) in 198 aa overlap (29-215:136-318) 10 20 30 40 50 mFLJ00 FDYTTMHRIKLNDRMSFPEELDMSTFIDIEDEKSPQTESCTDSGAENEGSCHSDQMSN .: : .. :: . .: . :. mKIAA1 QNAGSTFSSPEDALPSSEGMNGPFTSLHSSLETPAPPAPRTVTDEEMNFVKTCLQRWRSE 110 120 130 140 150 160 60 70 80 90 100 110 mFLJ00 DFSTDDAVDEGICLESSSGS-EKI-SKPGLEKNSLMYELFSVMVHSGSAAGGHYYACIKS .: : :. ::. . :.. : :.. . :.: .:.:: :.:..:::.: : . mKIAA1 --IEQDIQDLKNCISSSTKAIEQMYCDPLLRQ--VPYRLHAVLVHEGQASAGHYWAYIYN 170 180 190 200 210 220 120 130 140 150 160 170 mFLJ00 FSDDQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIY---RLKDPT . : ..:: :.. . :.... : : : ...:: :.: : . mKIAA1 QPRQIWLKYNDISVTESSWEELERDSYG--GLR---------NVSAYCLMYINDNLPHFS 230 240 250 260 270 180 190 200 210 220 mFLJ00 RNAKFLEVDEYPEHIKNL-VQKERELEEQEKR-QREIE----RNTCKIKLFCLHPVKQVM .:. : :: ... : :. .. ..:.. : :.:.: ...::: mKIAA1 AEASSNESDETAGEVEALSVELRQYIQEDNWRFQQEVEEWEEEQSCKIPQMESSPNSSSQ 280 290 300 310 320 330 230 240 250 260 270 280 mFLJ00 MENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVKYDEFHDYLERSYEGEEDTPMG mKIAA1 DFSTSQESPAVSSHEVRCLSSEHAVIAKEQTAQAIANTAHAYEKSGVEAALSEAFHEEYS 340 350 360 370 380 390 982 residues in 1 query sequences 1768035 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:07:22 2006 done: Mon Mar 27 10:07:23 2006 Scan time: 1.010 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]