FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1520.ptfa, 782 aa vs ./tmplib.26680 library 1768235 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.2839+/-0.00396; mu= 18.1871+/- 0.266 mean_var=74.6689+/-17.132, 0's: 0 Z-trim: 5 B-trim: 0 in 0/36 Lambda= 0.1484 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00002 ( 1486 res) mbg13511 (1486) 422 101 1.2e-21 mKIAA1062 ( 1416 res) mbg17754 (1416) 191 51 8.9e-07 mKIAA1888 ( 609 res) mbg15934 ( 609) 176 48 4.8e-06 mKIAA0822 ( 1574 res) mic38093 (1574) 146 42 0.00076 >>mFLJ00002 ( 1486 res) mbg13511 (1486 aa) initn: 473 init1: 237 opt: 422 Z-score: 481.1 bits: 100.7 E(): 1.2e-21 Smith-Waterman score: 530; 25.898% identity (27.733% ungapped) in 529 aa overlap (245-760:972-1478) 220 230 240 250 260 270 mKIAA1 ALGETFLPYYTGRAIDSIVIQKSMDQFTTAVVVVCLLAIGSSLAAGIRGGIFTLVFARLN ..: .: .:: . .:. .:. . mFLJ00 LFSPGNLYTPLLSTPLHKAASNGTADVHFYLIVYATIAGVNSLCTLLRAVLFAAGALQAA 950 960 970 980 990 1000 280 290 300 310 320 330 mKIAA1 IRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRNTVKVTGVV :.. :.. :. ..:.: . .: ...:..::.. :.: . .::.: :.: . :.. mFLJ00 ASLHHRLLHRLLMAPVTFYDSTPSGRVLNRFSSDVACVDDSLPFLLNILLANSVGLLGLL 1010 1020 1030 1040 1050 1060 340 350 360 370 380 390 mKIAA1 VFMFS-LSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKT . . : : : : :. ..: . . :.. : ...: . . . . . .:.... . mFLJ00 AVLGSGLPWLLLLLPPLSF-VYYSVQGYYRASFRELRRLGSLTWSPLYSHLADTLAGLPV 1070 1080 1090 1100 1110 1120 400 410 420 430 440 mKIAA1 VRSFANEEEEAEVFLRKLQQVYKLNRK-EAAAYMSYVW--------GSGLTLLVVQVSIL .:. . . : .. :.. .::.. . :.: .. : :.... .. .... mFLJ00 LRAAGATYR----FEEENQRLLELNQRCQFASYATMQWLDIRLQLMGAAVVSAIAGIALV 1130 1140 1150 1160 1170 450 460 470 480 490 500 mKIAA1 YYGGHLVISGQMSSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPT . :. : ..: . : . .:. .: :: .:. . . :. : mFLJ00 QHQQGLANPGAIGSPTSSAVAL---TLAT-PHSSPSVSPALLFSPS-------FLLPFPQ 1180 1190 1200 1210 1220 510 520 530 540 550 560 mKIAA1 MVHDGSLAPDHLEGRVDFENVTFTYRTR-PHTQVLQNVSFSLSPGKVTALVGPSGSGKSS :. .. .: :.:..:...:: :.. :..:.: . ::. ..:: .:::::: mFLJ00 SPHQQRISW-LTQGSVEFQDVVLVYRPGLPNA--LDGVTFRVEPGEKLGIVGRTGSGKSS 1230 1240 1250 1260 1270 1280 570 580 590 600 610 620 mKIAA1 CVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNIS-YGLPT .: . ..::::::. . . :. .... ::: ::. .: .:.. :: mFLJ00 LFLVLFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHE 1290 1300 1310 1320 1330 1340 630 640 650 660 670 680 mKIAA1 VPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLIL . .. : . . . . : . : ::.: .:: ::.: . .::::. . .: . mFLJ00 ---DRALWQALEQCHLSEVAVAMGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCI 1350 1360 1370 1380 1390 690 700 710 720 730 740 mKIAA1 DEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQ ::::...: ... :.::.: . .::: :::::.:. . ..::. ::::. . . mFLJ00 DEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSA 1400 1410 1420 1430 1440 1450 750 760 770 780 mKIAA1 LLAQG-GLYAKLVQRQMLGLEHPLDYTASHKEPPSNTEHKA : : .:. .:.: .. : mFLJ00 LRNQPHSLFQQLLQSSQQGAHSGPSGC 1460 1470 1480 >>mKIAA1062 ( 1416 res) mbg17754 (1416 aa) initn: 163 init1: 93 opt: 191 Z-score: 214.0 bits: 51.3 E(): 8.9e-07 Smith-Waterman score: 191; 22.650% identity (23.767% ungapped) in 234 aa overlap (520-748:1033-1260) 490 500 510 520 530 540 mKIAA1 GAAEKVFEFIDRQPTMVHDGSLAPDHLEGRVDFENVTFTYRTRPHTQVL--QNVSFSLSP : .::.: .:..: ..: . . ... : mKIAA1 LPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRP 1010 1020 1030 1040 1050 1060 550 560 570 580 590 600 mKIAA1 GKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVL :. .:.: .:.::.: ..: . ::.....:. . : ... .. : .: mKIAA1 GECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSV-LKDLLQVQQSLGYCPQFDAL 1070 1080 1090 1100 1110 1120 610 620 630 640 650 660 mKIAA1 FARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGA-QLSGGQKQR : :... . . : .:. :. :. ..: : :::.:.. mKIAA1 F-----DELTAREHLQLYTRLRGIPWKDEAQVVKWALEKLELTKYADKPAGTYSGGNKRK 1130 1140 1150 1160 1170 670 680 690 700 710 720 mKIAA1 VAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQR-HTVLIIAHRLSTVER-AH .. : ::. : ..::: :...: ... .. . : .. ..:.. .: . : mKIAA1 LSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCT 1180 1190 1200 1210 1220 1230 730 740 750 760 770 780 mKIAA1 LIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEHPLDYTASHKEPPSNTEHKA .... .::. :. :.: . : mKIAA1 RLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQNVKDVVRFFNRNFPEAMLKERHH 1240 1250 1260 1270 1280 1290 >>mKIAA1888 ( 609 res) mbg15934 (609 aa) initn: 168 init1: 93 opt: 176 Z-score: 200.8 bits: 47.6 E(): 4.8e-06 Smith-Waterman score: 176; 23.246% identity (25.481% ungapped) in 228 aa overlap (531-748:275-492) 510 520 530 540 550 mKIAA1 RQPTMVHDGSLAPDHLEGRVDFENVTFTYRTRPHTQV-LQNVSFSLSPGKVTALVGPSGS .: :.: . .:: .. :.. .:.::.:. mKIAA1 LMGCQCCEEKPAIMVCNLHKEYDDKKDFLHSRKTTKVATKYISFCVKKGEILGLLGPNGA 250 260 270 280 290 300 560 570 580 590 600 610 mKIAA1 GKSSCVNILE-NFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNIS- :::. .: : . : .: : : .. : . .. . . .:. .. ... mKIAA1 GKSTVINTLVGDVEPTSGKIFLGDYGSHSSEDDESIKCMGYCPQTNPLWPDLTLQEHFEI 310 320 330 340 350 360 620 630 640 650 660 670 mKIAA1 YGL--PTVPFEM--VVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARAL :: : .: :. :: ..:.. . .: .: : .: :... .: .. mKIAA1 YGAVKGMSPGDMKEVISRITKA------LDLKE-HLQKTVKK---LPAGIKRKLCFALSM 370 380 390 400 410 680 690 700 710 720 730 mKIAA1 VRNPPVLILDEATSALDAESEYLIQQAIHGNL--QRHTVLIIAHRLSTVERA-HLIVVLD . :: : .::: ....: ... . .::. . .....:. .: . .: . .... mKIAA1 LGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMV 420 430 440 450 460 470 740 750 760 770 780 mKIAA1 KGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEHPLDYTASHKEPPSNTEHKA .:.. :: :.: .. : mKIAA1 SGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQESFSSIL 480 490 500 510 520 530 >>mKIAA0822 ( 1574 res) mic38093 (1574 aa) initn: 339 init1: 108 opt: 146 Z-score: 161.4 bits: 41.7 E(): 0.00076 Smith-Waterman score: 212; 21.951% identity (23.276% ungapped) in 246 aa overlap (511-749:423-661) 490 500 510 520 530 mKIAA1 VYSGLMQGVGAAEKVFEFIDRQPTMVHDGSLAPD-HLEGRVDFENVTFTYRTRPHT-QVL ..:. : . . ..:.. :. .:. ..: mKIAA0 SFWLQTRKPAHVILEDGIDPVPSSGDSFEPVSPEFHGKESIRIRNISKEYKGKPNKIEAL 400 410 420 430 440 450 540 550 560 570 580 590 mKIAA1 QNVSFSLSPGKVTALVGPSGSGKSSCVNILENF-YPLQGGRVLLDGKPIGAYDHKYLHRV ....... :..::..: ::.:::. .::: .. : .:. .. ... : . . :. mKIAA0 KDLTLDIYEGQITAVLGHSGAGKSTLLNILSGLSVPTKGSVTIYNNNLSEMADLENILRI 460 470 480 490 500 510 600 610 620 630 640 650 mKIAA1 ISLVSQEPVLFAR-SITDNISY--GLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGE .. : : : .. .:. . .: . : . .:.. ..::. ... . mKIAA0 AGVCPQANVQFDFLTVRENLRLFAKIRGIPPQDVEKEVQRV-----LLELE--MKNIQNI 520 530 540 550 560 660 670 680 690 700 710 mKIAA1 KGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIA . .::::::...... :.. . ...::: :..:: :.. . . .. ..::. . mKIAA0 LAQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKERRADRVVLFST 570 580 590 600 610 620 720 730 740 750 760 770 mKIAA1 HRLSTVE-RAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEHPLDYTASHKE . .. .. : : ...::. :. : . :. mKIAA0 QFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGVGYHLSLQLKEVCVPENITSLVKQH 630 640 650 660 670 680 780 mKIAA1 PPSNTEHKA mKIAA0 IPAAKLSAEGEGKLLYTLPLETTYRFPELCQSLDSCPGLGIENYGVSMTTLNEVFLKLEG 690 700 710 720 730 740 782 residues in 1 query sequences 1768235 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:47:11 2006 done: Mon Mar 27 10:47:12 2006 Scan time: 0.850 Display time: 0.170 Function used was FASTA [version 3.4t11 Apr 17, 2002]