FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4192.ptfa, 1066 aa vs ./tmplib.26680 library 1767951 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.2267+/-0.00427; mu= 21.0221+/- 0.286 mean_var=85.3039+/-20.122, 0's: 0 Z-trim: 2 B-trim: 0 in 0/36 Lambda= 0.1389 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1630 ( 293 res) mbg22211 ( 293) 659 142 1.1e-34 >>mKIAA1630 ( 293 res) mbg22211 (293 aa) initn: 609 init1: 540 opt: 659 Z-score: 714.8 bits: 142.1 E(): 1.1e-34 Smith-Waterman score: 659; 39.041% identity (42.222% ungapped) in 292 aa overlap (451-733:4-282) 430 440 450 460 470 480 mKIAA4 EAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGT .::::.: ::::: ::: ::.:: . :. mKIAA1 TFQVHGDASFCGQGIVLETFTLSNLPHFRIGGS 10 20 30 490 500 510 520 530 540 mKIAA4 VHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTF .:..::::.:.:: . .::: : .:....:. :.:::.:.:: :. . ..: :.. : mKIAA1 IHLIVNNQLGYTTPAERGRSSLYSSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQF 40 50 60 70 80 90 550 560 570 580 590 600 mKIAA4 HKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEE .:::.:::.:::. ::::.:::.::.:.::: :: .: . . ::: :...:...: : . mKIAA1 RKDVIVDLLCYRQWGHNELDEPFFTNPVMYKIIRARKSIPDTYAEHLIASGLMTQEEVSD 100 110 120 130 140 150 610 620 630 640 650 mKIAA4 EISKYDKICEEAFTRSKDEKILHIKHW------LDSPWPGFFTLDGQPRS-MTCPSTGLE ..: .:. .:. . .. :. :.. : :. ::.. .: .::. mKIAA1 IKTSY-------YTKLNDH-LANVAHYSPPATNLQARWQGLV----QPEACVTTWDTGVP 160 170 180 190 200 660 670 680 690 700 710 mKIAA4 EDVLFHIGKVASSVPVENFTIHGGLSRI-LKTRRELVTNRT-VDWALAEYMAFGSLLKEG ..: :: . :: :.. .:. : .. ...: : : : . .::: :: .:.:::: .: mKIAA1 LELLRFIGVKSVEVP-EELQVHSHLLKMYVQSRMEKVKNGSGLDWATAETLALGSLLAQG 210 220 230 240 250 260 720 730 740 750 760 770 mKIAA4 IHVRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGF : . .. . :. ::. mKIAA1 QTFPCSIMASRKCSELHELHVIFWVSMATCHFH 270 280 290 1066 residues in 1 query sequences 1767951 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:04:36 2006 done: Mon Mar 27 11:04:37 2006 Scan time: 1.060 Display time: 0.020 Function used was FASTA [version 3.4t11 Apr 17, 2002]