# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh00534.fasta.nr -Q ../query/mKIAA0027.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0027, 423 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921173 sequences Expectation_n fit: rho(ln(x))= 4.7824+/-0.000181; mu= 12.5810+/- 0.010 mean_var=67.5141+/-13.104, 0's: 35 Z-trim: 40 B-trim: 0 in 0/65 Lambda= 0.156091 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148672440|gb|EDL04387.1| megalencephalic leukoe ( 406) 2643 604.1 1.9e-170 gi|149017523|gb|EDL76527.1| megalencephalic leukoe ( 406) 2574 588.6 9.1e-166 gi|26335885|dbj|BAC31643.1| unnamed protein produc ( 382) 2488 569.2 5.9e-160 gi|62287024|sp|Q60HE7.3|MLC1_MACFA RecName: Full=M ( 377) 2191 502.3 7.9e-140 gi|47123290|gb|AAH70042.1| Megalencephalic leukoen ( 377) 2173 498.2 1.3e-138 gi|20306686|gb|AAH28425.1| Megalencephalic leukoen ( 377) 2173 498.2 1.3e-138 gi|73968875|ref|XP_848790.1| PREDICTED: similar to ( 515) 2046 469.7 6.7e-130 gi|194226992|ref|XP_001489907.2| PREDICTED: simila ( 373) 1990 457.0 3.3e-126 gi|115305244|gb|AAI23461.1| Megalencephalic leukoe ( 378) 1935 444.6 1.8e-122 gi|224093476|ref|XP_002188699.1| PREDICTED: simila ( 379) 1842 423.7 3.6e-116 gi|221040596|dbj|BAH11975.1| unnamed protein produ ( 298) 1724 397.0 3e-108 gi|221042936|dbj|BAH13145.1| unnamed protein produ ( 347) 1653 381.1 2.2e-103 gi|109094608|ref|XP_001111660.1| PREDICTED: simila ( 359) 1578 364.2 2.7e-98 gi|111306104|gb|AAI21461.1| Megalencephalic leukoe ( 377) 1443 333.8 4e-89 gi|221039788|dbj|BAH11657.1| unnamed protein produ ( 325) 1349 312.6 8.5e-83 gi|221041756|dbj|BAH12555.1| unnamed protein produ ( 343) 1333 309.0 1.1e-81 gi|156230284|gb|AAI51968.1| Mlc1 protein [Danio re ( 391) 1320 306.2 9e-81 gi|94733128|emb|CAK04228.1| novel protein similar ( 391) 1314 304.8 2.3e-80 gi|47225782|emb|CAF98262.1| unnamed protein produc ( 377) 1166 271.5 2.4e-70 gi|90075270|dbj|BAE87315.1| unnamed protein produc ( 193) 1090 254.1 2.1e-65 gi|150036547|emb|CAO03521.1| megalencephalic leuko ( 223) 960 224.9 1.5e-56 >>gi|148672440|gb|EDL04387.1| megalencephalic leukoencep (406 aa) initn: 2506 init1: 2506 opt: 2643 Z-score: 3216.4 bits: 604.1 E(): 1.9e-170 Smith-Waterman score: 2643; 98.544% identity (98.544% similar) in 412 aa overlap (12-423:1-406) 10 20 30 40 50 60 mKIAA0 SAVWLRAFVPLMNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTL ::::::::::::::::::::::: :::::::::::::::::::: gi|148 MNTSCWKSITQRPAFPTAGRQQS------AMTREGQFREELGYDRMPTL 10 20 30 40 70 80 90 100 110 120 mKIAA0 ERGRQDAGRQDPGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERGRQDAGRQDPGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLG 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 NVFPSEMDYLRCAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NVFPSEMDYLRCAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 ILNPSAININFNLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ILNPSAININFNLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPAR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 VLKSYSVVEVIAGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VLKSYSVVEVIAGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECP 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SKCLVEVLIAISSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIKSYDVLLLLLLLLLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SKCLVEVLIAISSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIKSYDVLLLLLLLLLLL 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 QGGLNTGTAIQCVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QGGLNTGTAIQCVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQ 350 360 370 380 390 400 mKIAA0 MAQ ::: gi|148 MAQ >>gi|149017523|gb|EDL76527.1| megalencephalic leukoencep (406 aa) initn: 2461 init1: 2461 opt: 2574 Z-score: 3132.4 bits: 588.6 E(): 9.1e-166 Smith-Waterman score: 2574; 95.874% identity (97.573% similar) in 412 aa overlap (12-423:1-406) 10 20 30 40 50 60 mKIAA0 SAVWLRAFVPLMNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTL ::::::::::::::.:::: ::: :::::::::::::::::::: gi|149 MNTSCWKSITQRPALPTAGPQQS------AMTREGQFREELGYDRMPTL 10 20 30 40 70 80 90 100 110 120 mKIAA0 ERGRQDAGRQDPGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLG ::::::::::: ::::::.:::::::.::::::::::::::::::::::::::::::::: gi|149 ERGRQDAGRQDTGSYTPDTKPKDLQLTKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLG 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 NVFPSEMDYLRCAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NVFPSEMDYLRCAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 ILNPSAININFNLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPAR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|149 ILNPSAININFNLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGTNILDEVTFPAR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 VLKSYSVVEVIAGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VLKSYSVVEVIAGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECP 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SKCLVEVLIAISSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIKSYDVLLLLLLLLLLL :::::::::.::::::::::::::::::::::.::::::::: ::::::::::::::::: gi|149 SKCLVEVLITISSLTSPLLFTASGYLSFSVMRIVEIFKDYPPDIKSYDVLLLLLLLLLLL 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 QGGLNTGTAIQCVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQ ::::::::::::::::::::::::::: ::::::::::::::.::::::::::::::::: gi|149 QGGLNTGTAIQCVSFKVSARLQAASWDSQSCPQERPAGEVVRSPLKEFDKEKAWRAVVVQ 350 360 370 380 390 400 mKIAA0 MAQ ::: gi|149 MAQ >>gi|26335885|dbj|BAC31643.1| unnamed protein product [M (382 aa) initn: 2488 init1: 2488 opt: 2488 Z-score: 3028.1 bits: 569.2 E(): 5.9e-160 Smith-Waterman score: 2488; 99.738% identity (99.738% similar) in 382 aa overlap (42-423:1-382) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD :::::::::::::::::::::::::::::: gi|263 MTREGQFREELGYDRMPTLERGRQDAGRQD 10 20 30 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIKSYDVLLLLLLLLLLLQGGLNTGTAIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIKSYDVLLLLLLLLLLLQGGLNTGTAIQ 280 290 300 310 320 330 380 390 400 410 420 mKIAA0 CVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQMAQ :::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|263 CVSFKVSARLQAASWDPQSCPQERPAGEEVRGPLKEFDKEKAWRAVVVQMAQ 340 350 360 370 380 >>gi|62287024|sp|Q60HE7.3|MLC1_MACFA RecName: Full=Membr (377 aa) initn: 1760 init1: 1723 opt: 2191 Z-score: 2666.7 bits: 502.3 E(): 7.9e-140 Smith-Waterman score: 2191; 88.773% identity (95.822% similar) in 383 aa overlap (42-423:1-377) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD ::.: :::::.:::::::::::: : gi|622 MTQE-PFREELAYDRMPTLERGRQ-----D 10 20 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR :.::.::.::.::::::::::::: ::::::::::::::::::::::::::::.:::::: gi|622 PASYAPDTKPSDLQLSKRLPPCFSPKTWVFSVLMGSCLLVTSGFSLYLGNVFPAEMDYLR 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF ::::::::::::::.:.:::...::::::::::::::::::::::::::::::::::::: gi|622 CAAGSCIPSAIVSFTVSRRNANVIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI :::::::::::::::::.::::::: :::::::.:::.::: :: ::::::::::::::: gi|622 NLILLLLLELLMAATVIMSARSSEEYCKKKKGSMSDGTNILGEVPFPARVLKSYSVVEVI 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI ::.::::::.:::::...:::::::::::::::::::::::::::::::::::::::::: gi|622 AGISAVLGGIIALNVDDSVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLLLLQGGLNTGTAI :::::::::::::::::::::.::.::::::::: :::::::::::.::::.:::::::: gi|622 SSLTSPLLFTASGYLSFSVMRIVEMFKDYPPAIKPSYDVLLLLLLLVLLLQAGLNTGTAI 270 280 290 300 310 320 380 390 400 410 420 mKIAA0 QCVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQMAQ ::: ::::::::.:::: :: :::: ::::.:.:::::::::::::::::::: gi|622 QCVRFKVSARLQGASWDTQSGPQERLAGEVARSPLKEFDKEKAWRAVVVQMAQ 330 340 350 360 370 >>gi|47123290|gb|AAH70042.1| Megalencephalic leukoenceph (377 aa) initn: 1746 init1: 1709 opt: 2173 Z-score: 2644.8 bits: 498.2 E(): 1.3e-138 Smith-Waterman score: 2173; 87.467% identity (96.084% similar) in 383 aa overlap (42-423:1-377) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD ::.: :::::.:::::::::::: : gi|471 MTQE-PFREELAYDRMPTLERGRQ-----D 10 20 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR :.::.::.::.:::::::::::::.::::::::::::::::::::::::::::.:::::: gi|471 PASYAPDAKPSDLQLSKRLPPCFSHKTWVFSVLMGSCLLVTSGFSLYLGNVFPAEMDYLR 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF ::::::::::::::.:.:::...::::::::::::::::::::::::::.:::::::::: gi|471 CAAGSCIPSAIVSFTVSRRNANVIPNFQILFVSTFAVTTTCLIWFGCKLVLNPSAININF 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI ::::::::::::::::::.:::::: :::::::.::..:::::: ::::::::::::::: gi|471 NLILLLLLELLMAATVIIAARSSEEDCKKKKGSMSDSANILDEVPFPARVLKSYSVVEVI 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI ::.::::::.:::::...::::::::::::::::::::::::::.::: ::::::::::: gi|471 AGISAVLGGIIALNVDDSVSGPHLSVTFFWILVACFPSAIASHVAAECHSKCLVEVLIAI 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLLLLQGGLNTGTAI ::::::::::::::::::.::.::.::::::::: :::::::::::.::::.:::::::: gi|471 SSLTSPLLFTASGYLSFSIMRIVEMFKDYPPAIKPSYDVLLLLLLLVLLLQAGLNTGTAI 270 280 290 300 310 320 380 390 400 410 420 mKIAA0 QCVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQMAQ ::: ::::::::.:::: :. :::: ::::.:.:::::::::::::::::::: gi|471 QCVRFKVSARLQGASWDTQNGPQERLAGEVARSPLKEFDKEKAWRAVVVQMAQ 330 340 350 360 370 >>gi|20306686|gb|AAH28425.1| Megalencephalic leukoenceph (377 aa) initn: 1746 init1: 1709 opt: 2173 Z-score: 2644.8 bits: 498.2 E(): 1.3e-138 Smith-Waterman score: 2173; 87.467% identity (96.084% similar) in 383 aa overlap (42-423:1-377) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD ::.: :::::.:::::::::::: : gi|203 MTQE-PFREELAYDRMPTLERGRQ-----D 10 20 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR .::.::.::.:::::::::::::.::::::::::::::::::::::::::::.:::::: gi|203 HASYAPDAKPSDLQLSKRLPPCFSHKTWVFSVLMGSCLLVTSGFSLYLGNVFPAEMDYLR 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF ::::::::::::::.:.:::...::::::::::::::::::::::::::.:::::::::: gi|203 CAAGSCIPSAIVSFTVSRRNANVIPNFQILFVSTFAVTTTCLIWFGCKLVLNPSAININF 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI ::::::::::::::::::.:::::: :::::::.::..:::::: ::::::::::::::: gi|203 NLILLLLLELLMAATVIIAARSSEEDCKKKKGSMSDSANILDEVPFPARVLKSYSVVEVI 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI ::.::::::.:::::...::::::::::::::::::::::::::.::::::::::::::: gi|203 AGISAVLGGIIALNVDDSVSGPHLSVTFFWILVACFPSAIASHVAAECPSKCLVEVLIAI 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLLLLQGGLNTGTAI ::::::::::::::::::.::.::.::::::::: :::::::::::.::::.:::::::: gi|203 SSLTSPLLFTASGYLSFSIMRIVEMFKDYPPAIKPSYDVLLLLLLLVLLLQAGLNTGTAI 270 280 290 300 310 320 380 390 400 410 420 mKIAA0 QCVSFKVSARLQAASWDPQSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQMAQ ::: ::::::::.:::: :. :::: ::::.:.:::::::::::::::::::: gi|203 QCVRFKVSARLQGASWDTQNGPQERLAGEVARSPLKEFDKEKAWRAVVVQMAQ 330 340 350 360 370 >>gi|73968875|ref|XP_848790.1| PREDICTED: similar to meg (515 aa) initn: 982 init1: 982 opt: 2046 Z-score: 2488.4 bits: 469.7 E(): 6.7e-130 Smith-Waterman score: 2046; 81.061% identity (91.414% similar) in 396 aa overlap (30-423:131-515) 10 20 30 40 50 mKIAA0 SAVWLRAFVPLMNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPT : ..:. . ..:.:. : ::::::::::: gi|739 QKRQPAKVGRFQSGPDNSGRGDPGCECRCPGAANATVCALGTMSRDEQGREELGYDRMPT 110 120 130 140 150 160 60 70 80 90 100 110 mKIAA0 LERGRQDAGRQDPGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYL ::::: ::: ::. :.::.::::. :::::::.::::.:::::::::::::::::: gi|739 LERGRPDAG-----SYALDTKPNDLQLATRLPPCFSHKTWVLSVLMGSCLLVTSGFSLYL 170 180 190 200 210 120 130 140 150 160 170 mKIAA0 GNVFPSEMDYLRCAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCK ::::::::::::::::::.:::::::::.:::.:::::::::::::::.::::::::::: gi|739 GNVFPSEMDYLRCAAGSCLPSAIVSFAVSRRNISAIPNFQILFVSTFAITTTCLIWFGCK 220 230 240 250 260 270 180 190 200 210 220 230 mKIAA0 LILNPSAININFNLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPA :..:::::.:::::::::::::.::::::::::::: ::.: : . ...::: ::.::: gi|739 LVVNPSAIDINFNLILLLLLELFMAATVIISARSSEAHCKQK-GPMLESANILYEVAFPA 280 290 300 310 320 330 240 250 260 270 280 290 mKIAA0 RVLKSYSVVEVIAGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAEC ::::::::.::::::::::::::::::..::::::::::::::::::::::::::::::: gi|739 RVLKSYSVIEVIAGVSAVLGGVIALNVDDAVSGPHLSVTFFWILVACFPSAIASHVTAEC 340 350 360 370 380 390 300 310 320 330 340 350 mKIAA0 PSKCLVEVLIAISSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLL :::::::::::: :::::::::::::::::.::..::::::::::: :::::::::.: : gi|739 PSKCLVEVLIAICSLTSPLLFTASGYLSFSIMRIMEIFKDYPPAIKQSYDVLLLLLMLEL 400 410 420 430 440 450 360 370 380 390 400 410 mKIAA0 LLQGGLNTGTAIQCVSFKVSARLQAASWDP-QSCPQERPAGEVVRGPLKEFDKEKAWRAV :::.::::::.:::::::..: ::: :. :::: ::: :.:::::::::::::: gi|739 LLQAGLNTGTVIQCVSFKLGA-----SWDAAQTSQQERPPGEVSRSPLKEFDKEKAWRAV 460 470 480 490 500 420 mKIAA0 VVQMAQ :::::: gi|739 VVQMAQ 510 >>gi|194226992|ref|XP_001489907.2| PREDICTED: similar to (373 aa) initn: 960 init1: 960 opt: 1990 Z-score: 2422.1 bits: 457.0 E(): 3.3e-126 Smith-Waterman score: 1990; 81.771% identity (91.667% similar) in 384 aa overlap (42-423:1-373) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD :::: : ::::.:::.:::.::: :.: gi|194 MTREEQCREELSYDRLPTLDRGRPDVG--- 10 20 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR : :::.:: : ::.::: :::..:::::.:::::::::::::::::::::::::::: gi|194 --SRTPDTKPGALPLSSRLPSCFSHRTWVFSALMGSCLLVTSGFSLYLGNVFPSEMDYLR 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF ::::::::::::::::.:.....::::::::::::::::::::::::::.::::::.::: gi|194 CAAGSCIPSAIVSFAVSRKTINVIPNFQILFVSTFAVTTTCLIWFGCKLVLNPSAIDINF 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI :::::::::::::::::::::::: :.::::::...:: ::::::::::::::.::: gi|194 NLILLLLLELLMAATVIISARSSEAQ-WKQKGSISDSTSILYEVTFPARVLKSYSVIEVI 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI ::.::::::::::::....::::::::::::::::::::::::::::::::::::::::: gi|194 AGISAVLGGVIALNVDDTLSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLLLLQGGLNTGTAI ::::::::::::::::::::..:::.::::::: :::::::::.: ::::..:::::.. gi|194 CSLTSPLLFTASGYLSFSVMRILEIFRDYPPAIKQSYDVLLLLLMLELLLQASLNTGTVL 270 280 290 300 310 320 380 390 400 410 420 mKIAA0 QCVSFKVSARLQAASWDP-QSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQMAQ :::::::.: ::: : ::: :.::: :.:::::::::::::::::::: gi|194 QCVSFKVGA-----SWDATQPGPQECPSGEVSRSPLKEFDKEKAWRAVVVQMAQ 330 340 350 360 370 >>gi|115305244|gb|AAI23461.1| Megalencephalic leukoencep (378 aa) initn: 1068 init1: 948 opt: 1935 Z-score: 2355.1 bits: 444.6 E(): 1.8e-122 Smith-Waterman score: 1935; 78.756% identity (91.192% similar) in 386 aa overlap (42-423:1-378) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD :.:: : :: :.::::: ::::: ::. gi|115 MAREEQCREGLAYDRMPPLERGRPDAA--- 10 20 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR .:. :.:: :::::.::::::: ::::::::::.::::::::::::::::: :::::: gi|115 --GYALDTKPGDLQLSSRLPPCFSRKTWVFSVLMGGCLLVTSGFSLYLGNVFPLEMDYLR 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF ::::::::::::::::.::::::::.:::::::::::::.:::::::::.:::::..::: gi|115 CAAGSCIPSAIVSFAVSRRNVSAIPHFQILFVSTFAVTTSCLIWFGCKLVLNPSAVDINF 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI ::::::::::.::::::::::::: :::.: ::::..:..: ::::::::::::::.::. gi|115 NLILLLLLELFMAATVIISARSSEAPCKQK-GSISESSSVLYEVTFPARVLKSYSVIEVV 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI :::::.:::::::::...:::::.::::::.:::::::::::::::::::. :::::::. gi|115 AGVSAILGGVIALNVDDTVSGPHFSVTFFWVLVACFPSAIASHVTAECPSRSLVEVLIAV 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLLLLQGGLNTGTAI ::..:::::::::::::.::....:::::::.: :::.:::::.: ::::.::::.: : gi|115 CSLAAPLLFTASGYLSFSIMRIMDVFKDYPPAFKQSYDALLLLLMLELLLQAGLNTATII 270 280 290 300 310 320 380 390 400 410 420 mKIAA0 QCVSFKVSARLQAASWDPQSCPQERPA-GE--VVRGPLKEFDKEKAWRAVVVQMAQ ::: ::..: .::. :. :::::: :: : :. ::::::::::::::::::: gi|115 QCVRFKAGASWDAAGALPS--PQERPAAGELQVPRSSLKEFDKEKAWRAVVVQMAQ 330 340 350 360 370 >>gi|224093476|ref|XP_002188699.1| PREDICTED: similar to (379 aa) initn: 1628 init1: 1515 opt: 1842 Z-score: 2241.9 bits: 423.7 E(): 3.6e-116 Smith-Waterman score: 1842; 71.875% identity (90.104% similar) in 384 aa overlap (42-423:1-379) 20 30 40 50 60 70 mKIAA0 MNTSCWKSITQRPAFPTAGRQQSTMPVSSAMTREGQFREELGYDRMPTLERGRQDAGRQD :::: .:::..::::::::::.:. : gi|224 MTREEGYREEFSYDRMPTLERGKQENG--- 10 20 80 90 100 110 120 130 mKIAA0 PGSYTPDSKPKDLQLSKRLPPCFSYKTWVFSVLMGSCLLVTSGFSLYLGNVFPSEMDYLR .: :: : .:::::::: ::::::::.::.:::.:::.::::::::::.::::::::: gi|224 --NYIPDIKSSDLQLSKRLHPCFSYKTWIFSLLMGTCLLITSGFSLYLGNIFPSEMDYLR 30 40 50 60 70 80 140 150 160 170 180 190 mKIAA0 CAAGSCIPSAIVSFAVGRRNVSAIPNFQILFVSTFAVTTTCLIWFGCKLILNPSAININF ::::::::::.::::..: ....::::::::::::::::::::::::::.:::::::::: gi|224 CAAGSCIPSAVVSFAIARNKINVIPNFQILFVSTFAVTTTCLIWFGCKLVLNPSAININF 90 100 110 120 130 140 200 210 220 230 240 250 mKIAA0 NLILLLLLELLMAATVIISARSSEEPCKKKKGSISDGSNILDEVTFPARVLKSYSVVEVI :::::.:::..::.::::::::.:. : .::.. :.. .:..:.::::.::::::.::: gi|224 NLILLILLEIFMATTVIISARSTEDCCTRKKNAAHDSAIVLSNVSFPARILKSYSVIEVI 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 AGVSAVLGGVIALNVEEAVSGPHLSVTFFWILVACFPSAIASHVTAECPSKCLVEVLIAI :.:.:.::.::::.. ::::.:::::::::::::::::::::.:: :::::::::::: gi|224 IGISSVFGGIIALNMDVLVSGPYLSVTFFWILVACFPSAIASHVAAEYPSKCLVEVLIAI 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 SSLTSPLLFTASGYLSFSVMRVVEIFKDYPPAIK-SYDVLLLLLLLLLLLQGGLNTGTAI ::.:::::::::.:::::.:.::.:::.::::.: :::::::::.:.::.:. :. ::.: gi|224 SSVTSPLLFTASAYLSFSIMQVVDIFKSYPPAVKQSYDVLLLLLMLMLLIQACLTIGTVI 270 280 290 300 310 320 380 390 400 410 420 mKIAA0 QCVSFKVSARLQAASWDP-QSCPQERPAGEVVRGPLKEFDKEKAWRAVVVQMAQ :::..:.. .:: ..: : : :: . :: . ::.:::.:::.:::::::: gi|224 QCVNYKTKMKLQDSAWTPSQVKKQEYRTTEVSNNTLKDFDKDKAWKAVVVQMAQ 330 340 350 360 370 423 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 13:25:28 2009 done: Thu Mar 12 13:32:03 2009 Total Scan time: 894.590 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]