FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1842.ptfa, 263 aa vs ./tmplib.26680 library 1768754 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.2681+/-0.00376; mu= 19.3411+/- 0.253 mean_var=64.0412+/-14.133, 0's: 0 Z-trim: 18 B-trim: 0 in 0/36 Lambda= 0.1603 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1489 ( 627 res) mph01025 ( 627) 366 93 2.6e-20 mKIAA1354 ( 679 res) mbh01247 ( 679) 251 67 2.8e-12 mKIAA1309 ( 653 res) mbh03705 ( 653) 238 64 2.2e-11 mKIAA0132 ( 637 res) mfk00029 ( 637) 208 57 2.6e-09 mKIAA1340 ( 282 res) mpm09346 ( 282) 202 55 4.5e-09 mKIAA4210 ( 647 res) mfj22326 ( 647) 202 56 7e-09 mKIAA0469 ( 604 res) mpg00435 ( 604) 193 53 2.8e-08 mKIAA0711 ( 634 res) mpf00289 ( 634) 170 48 1.2e-06 mKIAA4221 ( 649 res) mph01865 ( 649) 156 45 1.1e-05 mKIAA4249 ( 609 res) mfj01240 ( 609) 151 44 2.4e-05 mKIAA0850 ( 644 res) mph01355 ( 644) 151 44 2.5e-05 mKIAA0795 ( 588 res) mfj41092 ( 588) 136 40 0.00026 mKIAA4181 ( 591 res) mfj29222 ( 591) 130 39 0.00068 mKIAA1921 ( 1004 res) mbg02133 (1004) 128 39 0.0012 mKIAA1490 ( 758 res) mbp00060 ( 758) 124 38 0.002 mKIAA1378 ( 105 res) mek00908 ( 105) 114 34 0.0036 mKIAA1384 ( 534 res) mfj40056 ( 534) 116 36 0.0061 >>mKIAA1489 ( 627 res) mph01025 (627 aa) initn: 382 init1: 147 opt: 366 Z-score: 456.9 bits: 93.5 E(): 2.6e-20 Smith-Waterman score: 449; 31.449% identity (35.317% ungapped) in 283 aa overlap (1-261:324-597) 10 20 mKIAA1 IAGGYRP---------SSSEVSIDHKAEND :::: : ..:... .. : mKIAA1 PQAEKVYKLCSPPADLHKVGTVVTPDNDIYIAGGQVPLKNTKTNHSKTSKLQTAFRTVNC 300 310 320 330 340 350 30 40 50 60 70 80 mKIAA1 FWMYDHSTNRWLSKPSLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSREN :. .: . : :. : .: .:. .:: : : .::::: :. ..:: ::.... mKIAA1 FYWFDAQQNTWFPKTPMLFVRVKPSLVCCEGYIYAIGGDSVGGELNR--RTVERYDTEKD 360 370 380 390 400 410 90 100 110 120 130 140 mKIAA1 CWMTVCAMPVAMEFHNAVEHKEKIYVLQGEFFLFYEPQKDYWGFLTPMTVPRIQGLAAVY : : .: : .. :: .. :::. ... : :..: : .. . : . ::.. mKIAA1 EWTMVSPLPCAWQWSAAVVVHDCIYVMTLNLMYCYFPRSDSWVEMAMRQTSRSFASAAAF 420 430 440 450 460 470 150 160 170 180 mKIAA1 KDSIYYIAG---TCGNHQRV---------FTVEAYDIELNKWTRKKDFPCDQSINPYLKL :.:.::.: . .. :. ::: ::.. :.: ..: . .: .. mKIAA1 GDKIFYIGGLHIATNSGIRLPSGTVDGSSVTVEIYDVNKNEWKMAANIPAKRYSDPCVRA 480 490 500 510 520 530 190 200 210 220 230 240 mKIAA1 VLFQNKLHLFVRATQVTVEEHIFRTSRKNSLYQYDDIADQWMKVYETPDR-LWDLGRHFE :...:.: .:.: : :. . . : :::: :.: . .: :::::: :. mKIAA1 VVISNSLCVFMR------ETHLNERA-KYVTYQYDLELDRWSLRQHISERVLWDLGRDFR 540 550 560 570 580 250 260 mKIAA1 CAVAKLYPQCLQKVL :.:.::::.::.. mKIAA1 CTVGKLYPSCLEESPWKPPTYLFSPDGTEEFELDGEMVALPPV 590 600 610 620 >>mKIAA1354 ( 679 res) mbh01247 (679 aa) initn: 125 init1: 76 opt: 251 Z-score: 312.9 bits: 66.9 E(): 2.8e-12 Smith-Waterman score: 251; 25.000% identity (29.185% ungapped) in 272 aa overlap (1-257:413-660) 10 20 30 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTN ..:: .:. . . : . . .: : mKIAA1 DERAQEWKSLAPMDAPRYQHGIAVIGNFLYVVGG---QSNYDTKGKTAVDTVFRFDPRYN 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 RWLSKPSLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMP .:.. :: . : .: :..::.::: :. : .::::. : : : : : mKIAA1 KWMQVASLNEKRTFFHLSALKGHLYAVGGRSAAGE----LATVECYNPRMNEWSYVAKMS 440 450 460 470 480 490 100 110 120 130 140 mKIAA1 VAMEFHNAVEHKEKIYV--------LQGEFFLFYEPQKDYWGFLTPMTVPRIQGLAAVYK : .. . .:. .:.:.. : .:. : : .:::. : . mKIAA1 EPHYGHAGTVYGGLMYISGGITHDTFQNELMCF-DPDTDKWTQKAPMTTVRGLHCMCTVG 500 510 520 530 540 550 150 160 170 180 190 mKIAA1 DSIYYIAGT----CGNHQRVFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLFQNKLHL :..: :.:. .... :.. : :. :..:: . :: . ...:.::... mKIAA1 DKLYVIGGNHFRGTSDYDDVLSCEYYSPTLDQWTPIAAMLRGQS---DVGVAVFENKIYV 560 570 580 590 600 610 200 210 220 230 240 250 mKIAA1 ---FVRATQVTVEEHIFRTSRKNSLYQYDDIADQWMKVYETPDRLWDLGRHFECAVAKLY . .. :: . .:: :.: ::.. :. .:: :... . mKIAA1 VGGYSWNNRCMVE----------IVQKYDPEKDEWHKVFDLPE---SLGGIRACTLTVFP 620 630 640 650 260 mKIAA1 PQCLQKVL :. mKIAA1 PEENPGSPSRESPLSAPSDHS 660 670 >>mKIAA1309 ( 653 res) mbh03705 (653 aa) initn: 155 init1: 71 opt: 238 Z-score: 296.8 bits: 63.9 E(): 2.2e-11 Smith-Waterman score: 238; 24.444% identity (28.448% ungapped) in 270 aa overlap (1-256:391-636) 10 20 30 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTN ..:: .:. . . : . . .: : mKIAA1 DEKTHEWKSLAPMDAPRYQHGIAVIGNFLYVVGG---QSNYDTKGKTAVDTVFRFDPRYN 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 RWLSKPSLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMP .:.. :: . : .: : .::.::: :. : .::::. : : : : : mKIAA1 KWIQVASLNEKRTFFHLSALKGFLYAVGGRNAAGE----LPTVECYNPRTNEWTYVAKMN 420 430 440 450 460 470 100 110 120 130 140 mKIAA1 VAMEFHNAVEHKEKIYVLQG-------EFFLFYEPQKDYWGFLTPMTVPRIQGLAAVYKD : .. . .:. : . .. ..:. : : .:::. : . : mKIAA1 EPHYGHAGTVYGGVMYISGGITHDTFQKELMCFDPDTDKWTQKAPMTTVRGLHCMCTVGD 480 490 500 510 520 530 150 160 170 180 190 mKIAA1 SIYYIAGT----CGNHQRVFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLFQNKLHL- .: :.:. .... :.. : :. :..:: .. :: . ...:.::... mKIAA1 RLYVIGGNHFRGTSDYDDVLSCEYYSPILDQWTPIASMLRGQS---DVGVAVFENKIYVV 540 550 560 570 580 590 200 210 220 230 240 250 mKIAA1 --FVRATQVTVEEHIFRTSRKNSLYQYDDIADQWMKVYETPDRLWDLGRHFECAVAKLYP . .. :: . .:: ..: ::.. :. .:: :... .:: mKIAA1 GGYSWNNRCMVE----------IVQKYDPEKNEWHKVFDLPE---SLGGIRACTLT-VYP 600 610 620 630 260 mKIAA1 QCLQKVL mKIAA1 PEEATPSPSRESPLSGP 640 650 >>mKIAA0132 ( 637 res) mfk00029 (637 aa) initn: 227 init1: 126 opt: 208 Z-score: 259.4 bits: 56.9 E(): 2.6e-09 Smith-Waterman score: 208; 28.571% identity (30.137% ungapped) in 154 aa overlap (25-171:358-510) 10 20 30 40 50 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTNRWLSKPSLLRARIGCKLVYCCGKM :. :.. :: .: : : : . mKIAA0 QAVPCRAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLL 330 340 350 360 370 380 60 70 80 90 100 110 mKIAA1 YAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMPVAMEFHNAVEHKEKIYVLQGEFFL ::.::: :: .. ....::. : : .: : . .. .::.. : mKIAA0 YAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGC 390 400 410 420 430 440 120 130 140 150 160 mKIAA1 F-------YEPQKDYWGFLTPMTVPRIQGLAAVYKDSIYYIAGTCGNHQRVFTVEAYDIE . :::..: : ...:: . :: .:: . .: ..: :.. :. ..: : : mKIAA0 IHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPE 450 460 470 480 490 500 170 180 190 200 210 220 mKIAA1 LNKWTRKKDFPCDQSINPYLKLVLFQNKLHLFVRATQVTVEEHIFRTSRKNSLYQYDDIA :.: mKIAA0 RNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMRHH 510 520 530 540 550 560 >>mKIAA1340 ( 282 res) mpm09346 (282 aa) initn: 249 init1: 100 opt: 202 Z-score: 255.2 bits: 55.0 E(): 4.5e-09 Smith-Waterman score: 277; 27.626% identity (33.810% ungapped) in 257 aa overlap (1-237:34-263) 10 20 30 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTN :.:::: .:.:.: :. :. :: mKIAA1 ERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHS-------YNPITN 10 20 30 40 50 40 50 60 70 80 90 mKIAA1 RWLSKPSLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMP .::. :. . : . ::: .:.:::::. ....::::. ... : : .: mKIAA1 EWLQVASMNQKRSNFKLVAVNSKLYAIGGQ--------AVSNVECYNPEQDAWNFVAPLP 60 70 80 90 100 100 110 120 130 140 mKIAA1 VAMEFHNAVEHKEKIYVLQGEF-------FLFYEPQKDYWGFLTPMTVP-RIQGLAAVYK . .: : : ::::. : .: : :. : : .. : : : ...: . mKIAA1 NPLAEFSACECKGKIYVIGGYTTRDRNMNILQYCPSADLWTLFETCDVHIRKQQMVSV-E 110 120 130 140 150 160 150 160 170 180 190 mKIAA1 DSIYYIAGTC----GNHQR------VFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLF ..:: ..: : : ..: ..::..:. .: :. ...: : .: mKIAA1 ETIYIVGG-CLHELGPNRRSSQSEDMLTVQSYNTVTRQWLYLKENTSKSGLN--LTCALH 170 180 190 200 210 220 200 210 220 230 240 250 mKIAA1 QNKLHLFVR--ATQVTVEEHIFRTSRKNSLYQYDDIADQWMKVYETPDRLWDLGRHFECA .. .... : . ....:...: .:. .::.: . : mKIAA1 NDGIYIMSRDVTLSTSLEHRVF--------LKYNIFADSWEAFRRFPAFGHNLLISSLYL 230 240 250 260 270 260 mKIAA1 VAKLYPQCLQKVL mKIAA1 PNKAET 280 >>mKIAA4210 ( 647 res) mfj22326 (647 aa) initn: 334 init1: 89 opt: 202 Z-score: 251.8 bits: 55.6 E(): 7e-09 Smith-Waterman score: 202; 31.515% identity (36.111% ungapped) in 165 aa overlap (20-172:418-573) 10 20 30 40 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTNRWLSK--P-SLLRARIGCK :. :: .::.: : : : :. .: mKIAA4 SMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVA 390 400 410 420 430 440 50 60 70 80 90 mKIAA1 LVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMP-----VAME----FHN .. : .::.::. :: . :. :: :: .:: : : .: ::. : mKIAA4 VLG--GFLYAVGGQ----DGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLY 450 460 470 480 490 500 100 110 120 130 140 150 mKIAA1 AVEHKEKIYVLQGEFFLFYEPQKDYWGFLTPMTVPRIQGLAAVYKDSIYYIAGTCGNHQR :: .. :. :.::.. : ..:: . : . :::.: :: ..: . . mKIAA4 AVGGSDGTSPLNT--VERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGR-DDTTE 510 520 530 540 550 160 170 180 190 200 210 mKIAA1 VFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLFQNKLHLFVRATQVTVEEHIFRTSRK . ..: :. . :.:. mKIAA4 LSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANT 560 570 580 590 600 610 >>mKIAA0469 ( 604 res) mpg00435 (604 aa) initn: 190 init1: 94 opt: 193 Z-score: 240.9 bits: 53.4 E(): 2.8e-08 Smith-Waterman score: 193; 25.949% identity (27.517% ungapped) in 158 aa overlap (25-178:402-554) 10 20 30 40 50 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTNRWLSKPSLLRARIGCKLVYCCGKM :::.:. : . . .:. . : :.. mKIAA0 VAPMLKAREYHSSSVLDGLLYVVAADSTERYDHATDSWEALQPMTYPMDNCSTTACRGRL 380 390 400 410 420 430 60 70 80 90 100 110 mKIAA1 YAIGGRVYEGDGRNSLKSVECYDSRENCWMTV-CA-MPVAMEFHNAVEHKEKIYVLQGEF ::::. . :.... ..::: . : : :. .: ..: . .: .. . mKIAA0 YAIGSLA----GKETM-VIQCYDPDTDLWSLVNCGQLPPWSFAPKTVTLNGLMYFVRDDS 440 450 460 470 480 120 130 140 150 160 170 mKIAA1 --FLFYEPQKDYWGFLTPMTVPRIQGLAAVYKDSIYYIAGTCGNHQRVFTVEAYDIELNK :.: :: : . :. .. : :: ..: .: .. . .::::: : mKIAA0 AEVDVYNPTKDEWDKIPSMNQVHVGGSLAVLGGKLYVSGGYDNTFELSDVVEAYDPETRA 490 500 510 520 530 540 180 190 200 210 220 230 mKIAA1 WTRKKDFPCDQSINPYLKLVLFQNKLHLFVRATQVTVEEHIFRTSRKNSLYQYDDIADQW :. .: mKIAA0 WSVVGRLPEPTFWHGSVSIFRQFMPQTPAGGRGFELNSGSNDVDAGYHRLPQNPEELH 550 560 570 580 590 600 >>mKIAA0711 ( 634 res) mpf00289 (634 aa) initn: 139 init1: 67 opt: 170 Z-score: 211.9 bits: 48.1 E(): 1.2e-06 Smith-Waterman score: 184; 28.302% identity (31.469% ungapped) in 159 aa overlap (1-154:370-517) 10 20 30 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTN .::: :.. . . .. . :. :. mKIAA0 EAGEWRELTRLPEGAPARGCGLCVLFNYLFVAGGVAPAGPDGRA--RPSDQVYCYNPVTD 340 350 360 370 380 390 40 50 60 70 80 90 mKIAA1 RWLSKPSLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMP : . : .:: .:. :..::.::. : ::: :: : . : .: .: mKIAA0 SWSTVRPLRQARSQVQLLALDGHLYAVGGEC--------LLSVERYDPRADRWTAVAPLP 400 410 420 430 440 100 110 120 130 140 mKIAA1 VAMEF--HNAVEHKEKIYVLQGEFF---LFYEPQKDYWGFLTPMTVPRIQGLAAVYKDSI . :.:. . .::: : .: : :.:..: : : . : .. : :.. mKIAA0 RGAFAVAHEAATCNGEIYVSGGSLFYRLLKYDPRRDEWQE-CPCSSSRERSADMVALDGF 450 460 470 480 490 500 150 160 170 180 190 200 mKIAA1 YYIAGTCGNHQRVFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLFQNKLHLFVRATQV : ::.. mKIAA0 LYRFDLCGSRGEAQAAVGSGGGVSVFRYHCLAKQWSQCAVHLRPPGAPAGLQPFRCVALD 510 520 530 540 550 560 >>mKIAA4221 ( 649 res) mph01865 (649 aa) initn: 265 init1: 84 opt: 156 Z-score: 194.3 bits: 44.9 E(): 1.1e-05 Smith-Waterman score: 214; 29.379% identity (35.616% ungapped) in 177 aa overlap (20-173:463-631) 10 20 30 40 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTNRW---------LSKPSLLR .: : : ....:: .. : : mKIAA4 KTWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFVATMSTPR 440 450 460 470 480 490 50 60 70 80 90 mKIAA1 ARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAM------PVAME . .: .. ::.::.::: :: . ::::::.: . : : :.::. :.. mKIAA4 STVGVAVL--SGKLYAVGGR----DGSSCLKSVECFDPHTNKW-TLCAQMSKRRGGVGVT 500 510 520 530 540 100 110 120 130 140 mKIAA1 FHNAVE-----HKEKIYVLQGEF---FLFYEPQKDYWGFLTPMTVPRIQGLAAVYKDSIY :.. : : ... :.:. : : .. :.: : . . :..: mKIAA4 TWNGLLYAIGGHDAPTSNLTSRLSDCVERYDPKTDVWTAVASMSVSRDAVGVCLLGDKLY 550 560 570 580 590 600 150 160 170 180 190 200 mKIAA1 YIAGTCGNHQRVFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLFQNKLHLFVRATQVT ..: : . . ::::: . :.::. mKIAA4 AVGGYDG-QTYLNIVEAYDPQTNEWTQVAPLCLGRAGACVVTVKI 610 620 630 640 >>mKIAA4249 ( 609 res) mfj01240 (609 aa) initn: 207 init1: 76 opt: 151 Z-score: 188.3 bits: 43.7 E(): 2.4e-05 Smith-Waterman score: 173; 25.000% identity (28.846% ungapped) in 180 aa overlap (3-172:412-577) 10 20 30 mKIAA1 IAGGYRPSSSEVSIDHKAENDFWMYDHSTNRW ::. :.. :.. :. ..:.: mKIAA4 VKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVE--------AYNIKSNEW 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 LS-KP-SLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSRENCWMTVCAMP . : . :. .: .: : .::.:: :.: .:. :..::::.. : : . : mKIAA4 FHVAPMNTRRSSVGVGVVG--GLLYAVGG--YDGASRQCLSTVECYNATANEWTYIAEMS 440 450 460 470 480 100 110 120 130 140 mKIAA1 VAMEFHNAVEHKEKIYVLQG-------EFFLFYEPQKDYWGFLTPMTV-PRIQGLAAVYK . .. .. .:.. : . :.: . : .. :.. : :. :: mKIAA4 TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-- 490 500 510 520 530 540 150 160 170 180 190 200 mKIAA1 DSIYYIAGTCGNHQRVFTVEAYDIELNKWTRKKDFPCDQSINPYLKLVLFQNKLHLFVRA ... :..: . . .:: :. .::: mKIAA4 NGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGKATSSCLLAYSETDIS 550 560 570 580 590 600 263 residues in 1 query sequences 1768754 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:54:16 2006 done: Mon Mar 27 10:54:17 2006 Scan time: 0.440 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]