FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0388.ptfa, 758 aa vs ./tmplib.26680 library 1768259 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.6817+/-0.00506; mu= 13.1306+/- 0.337 mean_var=144.2101+/-33.550, 0's: 0 Z-trim: 10 B-trim: 0 in 0/36 Lambda= 0.1068 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4065 ( 779 res) mpj03374 ( 779) 2725 432 1.1e-121 mKIAA1090 ( 857 res) mph00524 ( 857) 353 67 1.3e-11 mKIAA1076 ( 855 res) mbh01320 ( 855) 333 64 1.1e-10 mKIAA1420 ( 907 res) mfj05028 ( 907) 329 63 1.7e-10 mKIAA1876 ( 348 res) mpj00624 ( 348) 323 61 1.8e-10 mKIAA0339 ( 822 res) mph02448 ( 822) 316 61 6.4e-10 mKIAA0304 ( 1744 res) mbg06324 (1744) 307 60 2.6e-09 mKIAA1506 ( 1520 res) mbg19167 (1520) 304 59 3.3e-09 mKIAA0067 ( 1162 res) mbg05662 (1162) 186 41 0.00085 >>mKIAA4065 ( 779 res) mpj03374 (779 aa) initn: 3097 init1: 1817 opt: 2725 Z-score: 2276.7 bits: 432.0 E(): 1.1e-121 Smith-Waterman score: 3374; 65.252% identity (69.394% ungapped) in 754 aa overlap (26-757:48-778) 10 20 30 40 50 mKIAA0 SQHFPLHSMRKMDIASPPTSKCITYWKRKVKSEYMRLRQLKRLQANMGAKALYVA :...:::::::::::::.. .:... . mKIAA4 ATRGRGAGWRAGRRIIMGQTGKKSEKGPVCWRKRVKSEYMRLRQLKRFRRADEVKTMFSS 20 30 40 50 60 70 60 70 80 90 100 110 mKIAA0 NFAKVQEKTQILNEEWKKLRVQPVQPMKPVSGHPFLKKCTIESIFPGFDSQDMLMRSLNT : :. :.:. ::.:::. :.:::. : ::. ..:.. : . : .: . ...::. mKIAA4 NRQKILERTETLNQEWKQRRIQPVHIMTSVSSLRGTRECSVTSDLD-FPAQVIPLKTLNA 80 90 100 110 120 130 120 130 140 150 160 170 mKIAA0 VALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEM :: :::::::::::::::::::::: ::::::::: ..: :::::::.::::::::..: mKIAA4 VASVPIMYSWSPLQQNFMVEDETVLHNIPYMGDEVLDQDGTFIEELIKNYDGKVHGDREC 140 150 160 170 180 190 180 190 200 210 220 230 mKIAA0 IPGSVLISDAVFLELVDALNQYSDEEEDGHNDPSDGKQDDSKEDLPVTRKRKRHAIEGNK : .:.: .:.:::.::.::.:...: .: : ... .: :: .: : . mKIAA4 --G--FINDEIFVELVNALGQYNDDDDDDDGDDPDEREEKQK-DLEDNRDDK-------E 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 KSSKKQFPNDMIFSAIASMFPENGVPDDMKERYRELTEMSDPNALPPQCTPNIDGPNAKS ..:: : :: ::.::::..:. ...::.:.::::.. :.::::.:::::::::::: mKIAA4 TCPPRKFPADKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECTPNIDGPNAKS 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 VQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNKEIKIEPEPCGTDCFLLLEGA :::::::::::::::::::::::::::::::::.::::: : .. .::: .:. :::: mKIAA4 VQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNTYKRKNTETALDNKPCGPQCYQHLEGA 310 320 330 340 350 360 360 370 380 390 400 mKIAA0 KEYAM------LHNPRSKCSGRRRRRHPVVSASCSNASASAMAETKEGDSDRDTGN---- ::.: ...: .. .:::: : : :. :. . :.. :.:. ::::..:. mKIAA4 KEFAAALTAERIKTPPKRPGGRRRGRLPNNSSRPSTPTISVL-ESKDTDSDREAGTETGG 370 380 390 400 410 420 410 420 430 440 450 mKIAA0 -----------DWASSSSEANSRCQTPTKQKASPAPAQLCVVEAPSEPVEWTGAEESLFR : .::::::::::::: :.: . .: : : :::.::: :.:: mKIAA4 ENNDKEEEEKKDETSSSSEANSRCQTPIKMKPN--------IEPP-ENVEWSGAEASMFR 430 440 450 460 470 460 470 480 490 500 510 mKIAA0 VFHGTYFNNFCSIARLLGTKTCKQVFQFAVKES-LILKLPTDELMNPAQKKKRKHRLWAA :. :::..:::.::::.:::::.::..: :::: .: .::... .: .::::::::::: mKIAA4 VLIGTYYDNFCAIARLIGTKTCRQVYEFRVKESSIIAPVPTEDVDTPPRKKKRKHRLWAA 480 490 500 510 520 530 520 530 540 550 560 570 mKIAA0 HCRKIQLKKDNNSTQVYNYQPCDHPDRPCDSTCPCIMTQNFCEKFCQCSPDCQNRFPGCR ::::::::::..:..:::::::::: .::::.:::...::::::::::: .::::::::: mKIAA4 HCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSECQNRFPGCR 540 550 560 570 580 590 580 590 600 610 620 630 mKIAA0 CKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDV ::.::::::::::::::::::::::::::..::: : ::::::::::: ::::::::::: mKIAA4 CKAQCNTKQCPCYLAVRECDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDV 600 610 620 630 640 650 640 650 660 670 680 690 mKIAA0 AGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKG :::: :::. :::::::::::::.::::::::::::::::: :::::::::::::::::: mKIAA4 AGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKG 660 670 680 690 700 710 700 710 720 730 740 750 mKIAA0 NKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIER ::::::::::::::::::.:::::::::::::::::.::::::::::::::::::::::: mKIAA4 NKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIER 720 730 740 750 760 770 mKIAA0 ETDVF : .. mKIAA4 EMEIP >>mKIAA1090 ( 857 res) mph00524 (857 aa) initn: 335 init1: 171 opt: 353 Z-score: 301.1 bits: 66.6 E(): 1.3e-11 Smith-Waterman score: 360; 31.818% identity (36.493% ungapped) in 242 aa overlap (507-738:451-671) 480 490 500 510 520 530 mKIAA0 KQVFQFAVKESLILKLPTDELMNPAQKKKRKHRLWAAHCR--KIQLKKDNNSTQVYNYQP :. : :. : ...:... :: . .: mKIAA1 YWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFNEVKLQREARETQESERKP 430 440 450 460 470 480 540 550 560 570 580 mKIAA0 CDHPDRPCDSTCPC----IMTQNFCE-KFCQCSPDCQNRFPGCRCKTQCNTKQCPCYLAV : . . : :.: .. : :.:.: .: : : ..: .. . . mKIAA1 --PPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDEN--P-CGSDSECLNR-----MLM 490 500 510 520 530 590 600 610 620 630 640 mKIAA0 RECDPDLCLTCGASEHWDCKVVSCKN-CSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNE :: :..: :.:. :.: : .: . .. .: ::: :....:.: mKIAA1 FECHPQVC---PAGEY-------CQNQCFTKRQYPETKIIK-TDGKGWGLVAKRDIRKGE 540 550 560 570 650 660 670 680 690 700 mKIAA0 FISEYCGELISQDEADRRGK-VYDKYMSSF-LFNLNNDFVVDATRKGNKIRFANHSVNPN :..:: ::::...: : : .... .. : ......: ..:: ::: :: ::: .:: mKIAA1 FVNEYVGELIDEEECMARIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPN 580 590 600 610 620 630 710 720 730 740 750 mKIAA0 CYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF : . :::: :.:.:: : :: :: :.: mKIAA1 CETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPK 640 650 660 670 680 690 mKIAA1 TSASLSSEEKGKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSC 700 710 720 730 740 750 >>mKIAA1076 ( 855 res) mbh01320 (855 aa) initn: 409 init1: 237 opt: 333 Z-score: 284.4 bits: 63.5 E(): 1.1e-10 Smith-Waterman score: 333; 41.935% identity (42.623% ungapped) in 124 aa overlap (623-744:715-838) 600 610 620 630 640 650 mKIAA0 DPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISE ::.: . : . :: : : . .:.. : mKIAA1 ERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIE 690 700 710 720 730 740 660 670 680 690 700 710 mKIAA0 YCGELISQDEADRRGKVY-DKYM-SSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAK : :. : : :: : : : :. . ::..: ...: ..:::. :: :: ::: ::::::: mKIAA1 YVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAK 750 760 770 780 790 800 720 730 740 750 mKIAA0 VVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF :. :.....: :..:. :...::. .::.. :. mKIAA1 VITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 810 820 830 840 850 >>mKIAA1420 ( 907 res) mfj05028 (907 aa) initn: 378 init1: 200 opt: 329 Z-score: 280.8 bits: 62.9 E(): 1.7e-10 Smith-Waterman score: 339; 33.333% identity (37.427% ungapped) in 192 aa overlap (559-747:35-208) 530 540 550 560 570 580 mKIAA0 VYNYQPCDHPDRPCDSTCPCIMTQNFCEKFCQCS-PDCQNRFPGCRCKTQCNTKQCPCYL :.:. :: ..: :: .: . mKIAA1 YKKPDVPLYKKIRSNVYVDVKPLSGYEATTCNCKKPDDDTR-KGC-------GDDCLNRM 10 20 30 40 50 590 600 610 620 630 640 mKIAA0 AVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLA-PSDVAGWGTFIKESVQK ::.:. : :: . : : ::: . : .. ::: :: .. mKIAA1 IFAECSPNTC-PCGEQ---------CCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKA 60 70 80 90 100 650 660 670 680 690 700 mKIAA0 NEFISEYCGELISQDE-ADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNP ..:: :: ::..:..: .: . : .. . . .::.. .:.:. : ::. :: ::: .: mKIAA1 GQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDP 110 120 130 140 150 160 710 720 730 740 750 mKIAA0 NCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF :: . ::: .:::..: . . :: :: .:: . . .. : mKIAA1 NCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGK 170 180 190 200 210 220 mKIAA1 SQRMNGLPSHKGSQSSSTHRKSARAKEKRKSKHKLKKRKGHPSEEPSENINTPTRLTPQL 230 240 250 260 270 280 >>mKIAA1876 ( 348 res) mpj00624 (348 aa) initn: 238 init1: 114 opt: 323 Z-score: 280.3 bits: 61.5 E(): 1.8e-10 Smith-Waterman score: 323; 33.014% identity (38.122% ungapped) in 209 aa overlap (545-738:87-282) 520 530 540 550 560 570 mKIAA0 CRKIQLKKDNNSTQVYNYQPCDHPDRPCDSTCPCIMTQNFCE-KFCQCSPDCQNRFPGC- : : . .:. . ..: : ::.. : mKIAA1 GYERIPIPCVNAVDSELCPTNYKYVSQNCVTSPMNIDRNITHLQYCVCVDDCSSSTCMCG 60 70 80 90 100 110 580 590 600 610 620 mKIAA0 ----RCKTQCNTKQCPCYLAVRECDPDLCLTCG-ASEHWDCKVVSCKNCSIQRGLKKHLL :: . . . : . .: : . :. : : .:.: .: ::. .: mKIAA1 QLSMRCWYDKDGRLLPEF---NMAEPPLIFECNHACSCWR----NCRNRVVQNGLRARLQ 120 130 140 150 160 630 640 650 660 670 680 mKIAA0 LAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNND--- : .. :::. ... . :. :: :::::..::: : . .:.::.:.: mKIAA1 LYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVREE------DSYLFDLDNKDGE 170 180 190 200 210 220 690 700 710 720 730 mKIAA0 -FVVDATRKGNKIRFANHSVNPNCY-AKVVMVNGD---HRIGIFAKRAIQAGEELFFDYR . .:: :: :: :: .:: ..: : . : ::..:. : :::::.: ::: mKIAA1 VYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYG 230 240 250 260 270 280 740 750 mKIAA0 YSQADALKYVGIERETDVF mKIAA1 ERFWDVKGKLFSCRCGSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPPLILMK 290 300 310 320 330 340 >>mKIAA0339 ( 822 res) mph02448 (822 aa) initn: 442 init1: 228 opt: 316 Z-score: 270.5 bits: 60.9 E(): 6.4e-10 Smith-Waterman score: 316; 39.516% identity (40.164% ungapped) in 124 aa overlap (623-744:682-805) 600 610 620 630 640 650 mKIAA0 DPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISE ::.: .. : . :: : : . .:.. : mKIAA0 RSEQRRLLSAIGTSAIMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIE 660 670 680 690 700 710 660 670 680 690 700 710 mKIAA0 YCGELISQDEADRRGKVY--DKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAK : :. : : :: : : : . ::.:: ...: ..:::. :: :: :: .:::::: mKIAA0 YVGQNIRQMVADMREKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAK 720 730 740 750 760 770 720 730 740 750 mKIAA0 VVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF :. ......: :..:. : . ::. .::.. : mKIAA0 VITIESQKKIVIYSKQPIGVDEEITYDYKFPLEDNKIPCLCGTESCRGSLN 780 790 800 810 820 >>mKIAA0304 ( 1744 res) mbg06324 (1744 aa) initn: 298 init1: 213 opt: 307 Z-score: 259.4 bits: 59.9 E(): 2.6e-09 Smith-Waterman score: 307; 42.241% identity (42.609% ungapped) in 116 aa overlap (631-745:1611-1726) 610 620 630 640 650 660 mKIAA0 GASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQ : . : : : :.... .:.. :: : .: . mKIAA0 TRRATSLELPMAMRFRHLKKTSKEAVGVYRSAIHGRGLFCKRNIDAGEMVIEYSGIVIRS 1590 1600 1610 1620 1630 1640 670 680 690 700 710 mKIAA0 DEADRRGKVYD-KYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHR .:.: : :: : .. ..: ... ::::: .:: :: ::: .:::...:. :.:... mKIAA0 VLTDKREKFYDGKGIGCYMFRMDDFDVVDATMHGNAARFINHSCEPNCFSRVIHVEGQKH 1650 1660 1670 1680 1690 1700 720 730 740 750 mKIAA0 IGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF : ::: : : :::: .::.. :: mKIAA0 IVIFALRRILRGEELTYDYKFPIEDASNKLPCNCGAKRCRRFLN 1710 1720 1730 1740 >>mKIAA1506 ( 1520 res) mbg19167 (1520 aa) initn: 227 init1: 195 opt: 304 Z-score: 257.6 bits: 59.4 E(): 3.3e-09 Smith-Waterman score: 304; 37.398% identity (37.705% ungapped) in 123 aa overlap (623-744:1379-1501) 600 610 620 630 640 650 mKIAA0 DPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISE :... :: : . : : . ....:. .. : mKIAA1 STVTGELNAPYSKQFVHSKSSQYRRMKTEWKSNVYLARSRIQGLGLYAARDIEKHTMVIE 1350 1360 1370 1380 1390 1400 660 670 680 690 700 710 mKIAA0 YCGELISQDEADRRGKVYD-KYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKV : : .: .. :.:. :.:. . . ..: ..:: :.::: :. :. ::: ::: :.: mKIAA1 YIGTIIRNEVANRKEKLYESQNRGVYMFRMDNDHVIDATLTGGPARYINHSCAPNCVAEV 1410 1420 1430 1440 1450 1460 720 730 740 750 mKIAA0 VMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF : . :.: : ..: :: :::: .::... : mKIAA1 VTFERGHKIIISSNRRIQKGEELCYDYKFDFEDDQHKIPCHCGAVNCRKWMN 1470 1480 1490 1500 1510 1520 >>mKIAA0067 ( 1162 res) mbg05662 (1162 aa) initn: 283 init1: 104 opt: 186 Z-score: 160.6 bits: 41.0 E(): 0.00085 Smith-Waterman score: 186; 25.503% identity (27.536% ungapped) in 149 aa overlap (546-693:603-741) 520 530 540 550 560 570 mKIAA0 RKIQLKKDNNSTQVYNYQPCDHPDRPCDSTCPCIMTQNFCEKFCQCSPDCQNRFPGCRCK : : .. :. : : . . .: mKIAA0 TTPPPQVAYSKERIPGKGVFINTGPEFLVGCDC---KDGCRDKCACH-QLTIQATACTPG 580 590 600 610 620 580 590 600 610 620 630 mKIAA0 TQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAG : : .. : ..:: : : ... .: : : .:.::. .: : .. : mKIAA0 GQVNPNSGYQYKRLEECLPTGVYEC--NKRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKG 630 640 650 660 670 680 640 650 660 670 680 690 mKIAA0 WGTFIKESVQKNEFISEYCGELISQDEADRRG-KVYDKYMSSFLFNLNNDFVVDATRKGN :: ... :. :. : :.....: ::..: .. :.:.. ::.. :. ..: mKIAA0 WGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFA----NLDHIESVENFKEGY 690 700 710 720 730 740 700 710 720 730 740 750 mKIAA0 KIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERE mKIAA0 ESDVPTSSDSSGVDMKDQEDGNSGSEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQ 750 760 770 780 790 800 758 residues in 1 query sequences 1768259 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:19:35 2006 done: Mon Mar 27 10:19:36 2006 Scan time: 0.890 Display time: 0.250 Function used was FASTA [version 3.4t11 Apr 17, 2002]