# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh00306.fasta.nr -Q ../query/mKIAA1823.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1823, 376 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919242 sequences Expectation_n fit: rho(ln(x))= 4.7733+/-0.000194; mu= 11.5159+/- 0.011 mean_var=75.6416+/-14.839, 0's: 42 Z-trim: 48 B-trim: 2740 in 2/67 Lambda= 0.147467 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|42559525|sp|Q9D4J7.1|PHF6_MOUSE RecName: Full=P ( 364) 2504 542.2 6.6e-152 gi|149029222|gb|EDL84495.1| rCG47045, isoform CRA_ ( 364) 2482 537.5 1.7e-150 gi|42559482|sp|Q8IWS0.1|PHF6_HUMAN RecName: Full=P ( 365) 2448 530.3 2.6e-148 gi|74008475|ref|XP_852628.1| PREDICTED: similar to ( 365) 2444 529.4 4.6e-148 gi|122132337|sp|Q08DR0.1|PHF6_BOVIN RecName: Full= ( 365) 2444 529.4 4.6e-148 gi|74008481|ref|XP_866100.1| PREDICTED: similar to ( 366) 2432 526.9 2.7e-147 gi|194044956|ref|XP_001927436.1| PREDICTED: simila ( 366) 2430 526.4 3.7e-147 gi|74008479|ref|XP_866088.1| PREDICTED: similar to ( 361) 2388 517.5 1.8e-144 gi|148697171|gb|EDL29118.1| PHD finger protein 6, ( 335) 2307 500.2 2.6e-139 gi|57209488|emb|CAI41602.1| PHD finger protein 6 [ ( 324) 2182 473.6 2.6e-131 gi|26324452|dbj|BAC25980.1| unnamed protein produc ( 284) 1977 430.0 3.1e-118 gi|123231112|emb|CAM16319.1| PHD finger protein 6 ( 451) 1977 430.2 4.4e-118 gi|160773521|gb|AAI55377.1| Phf6 protein [Xenopus ( 363) 1965 427.5 2.2e-117 gi|54037992|gb|AAH84226.1| LOC495066 protein [Xeno ( 366) 1953 425.0 1.3e-116 gi|26332501|dbj|BAC29968.1| unnamed protein produc ( 298) 1950 424.2 1.7e-116 gi|194382512|dbj|BAG64426.1| unnamed protein produ ( 331) 1946 423.4 3.4e-116 gi|158261213|dbj|BAF82784.1| unnamed protein produ ( 311) 1886 410.6 2.3e-112 gi|57209487|emb|CAI41601.1| PHD finger protein 6 [ ( 312) 1874 408.1 1.3e-111 gi|13543686|gb|AAH05994.1| PHD finger protein 6 [H ( 312) 1869 407.0 2.8e-111 gi|74008477|ref|XP_866071.1| PREDICTED: similar to ( 325) 1864 406.0 6e-111 gi|28277541|gb|AAH44163.1| PHD finger protein 6 [D ( 363) 1768 385.6 9.1e-105 gi|113197883|gb|AAI21606.1| Phf6 protein [Xenopus ( 319) 1712 373.6 3.2e-101 gi|47206914|emb|CAF94680.1| unnamed protein produc ( 275) 1244 274.0 2.7e-71 gi|194383358|dbj|BAG64650.1| unnamed protein produ ( 123) 802 179.6 3.1e-43 gi|149029223|gb|EDL84496.1| rCG47045, isoform CRA_ ( 92) 527 121.0 1e-25 gi|74183127|dbj|BAE22522.1| unnamed protein produc ( 68) 471 108.9 3.2e-22 gi|161612259|gb|AAI55884.1| LOC100127287 protein [ ( 673) 438 102.9 2.1e-19 gi|210083078|gb|EEA31713.1| hypothetical protein B ( 444) 418 98.5 3e-18 gi|89272034|emb|CAJ82894.1| Novel protein similar ( 166) 410 96.3 4.9e-18 gi|73989160|ref|XP_850073.1| PREDICTED: similar to ( 255) 377 89.5 8.6e-16 gi|118084871|ref|XP_417062.2| PREDICTED: hypotheti ( 285) 372 88.5 1.9e-15 gi|49258170|gb|AAH74029.1| LOC569187 protein [Dani ( 539) 360 86.2 1.8e-14 gi|109120746|ref|XP_001103342.1| PREDICTED: PHD fi ( 331) 357 85.4 2e-14 gi|189523573|ref|XP_697646.2| PREDICTED: similar t ( 648) 360 86.3 2e-14 gi|109120748|ref|XP_001103199.1| PREDICTED: PHD fi ( 292) 353 84.5 3.3e-14 gi|20988401|gb|AAH30186.1| DNA segment, Chr 14, ER ( 247) 352 84.2 3.4e-14 gi|148704191|gb|EDL36138.1| mCG13856, isoform CRA_ ( 269) 352 84.2 3.6e-14 gi|221124153|ref|XP_002166715.1| PREDICTED: simila ( 281) 352 84.2 3.7e-14 gi|148704190|gb|EDL36137.1| mCG13856, isoform CRA_ ( 296) 352 84.3 3.8e-14 gi|74140048|dbj|BAE33765.1| unnamed protein produc ( 320) 352 84.3 4e-14 gi|148877971|gb|AAI45674.1| D14Ertd668e protein [M ( 337) 352 84.3 4.2e-14 gi|194390762|dbj|BAG62140.1| unnamed protein produ ( 159) 333 79.9 4.1e-13 gi|94397194|ref|XP_898549.2| PREDICTED: hypothetic ( 202) 334 80.3 4.1e-13 gi|94397592|ref|XP_916528.2| PREDICTED: hypothetic ( 228) 334 80.3 4.5e-13 gi|148704195|gb|EDL36142.1| mCG6143 [Mus musculus] ( 219) 333 80.1 5.1e-13 gi|194221883|ref|XP_001915236.1| PREDICTED: simila ( 300) 333 80.2 6.3e-13 gi|56971987|gb|AAH88433.1| PHD finger protein 11 [ ( 336) 328 79.2 1.4e-12 gi|56971497|gb|AAH88253.1| PHD finger protein 11-l ( 293) 327 78.9 1.5e-12 gi|148704192|gb|EDL36139.1| mCG13862, isoform CRA_ ( 208) 316 76.4 6e-12 gi|87578364|gb|AAI13246.1| PHD finger protein 11 [ ( 337) 318 77.1 6.3e-12 >>gi|42559525|sp|Q9D4J7.1|PHF6_MOUSE RecName: Full=PHD f (364 aa) initn: 2504 init1: 2504 opt: 2504 Z-score: 2883.5 bits: 542.2 E(): 6.6e-152 Smith-Waterman score: 2504; 100.000% identity (100.000% similar) in 364 aa overlap (13-376:1-364) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF :::::::::::::::::::::::::::::::::::::::::::::::: gi|425 MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG 290 300 310 320 330 340 370 mKIAA1 RVAIDQQLTQQQLNGN :::::::::::::::: gi|425 RVAIDQQLTQQQLNGN 350 360 >>gi|149029222|gb|EDL84495.1| rCG47045, isoform CRA_d [R (364 aa) initn: 2482 init1: 2482 opt: 2482 Z-score: 2858.2 bits: 537.5 E(): 1.7e-150 Smith-Waterman score: 2482; 99.176% identity (99.451% similar) in 364 aa overlap (13-376:1-364) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL ::::::: ::.:::::::::: :::::::::::::::::::::::::::::::::::::: gi|149 KTNLKGLAEDTRSTSSHGTDETESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG 290 300 310 320 330 340 370 mKIAA1 RVAIDQQLTQQQLNGN :::::::::::::::: gi|149 RVAIDQQLTQQQLNGN 350 360 >>gi|42559482|sp|Q8IWS0.1|PHF6_HUMAN RecName: Full=PHD f (365 aa) initn: 2412 init1: 2412 opt: 2448 Z-score: 2819.1 bits: 530.3 E(): 2.6e-148 Smith-Waterman score: 2448; 97.260% identity (98.904% similar) in 365 aa overlap (13-376:1-365) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|425 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|425 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL :::.::: ::.::::::::::::::::::::::::::.:::::::::::::::::::::: gi|425 KTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG 290 300 310 320 330 340 370 mKIAA1 RVAIDQQ-LTQQQLNGN .: :::: ::::::::: gi|425 KVEIDQQQLTQQQLNGN 350 360 >>gi|74008475|ref|XP_852628.1| PREDICTED: similar to PHD (365 aa) initn: 2408 init1: 2408 opt: 2444 Z-score: 2814.5 bits: 529.4 E(): 4.6e-148 Smith-Waterman score: 2444; 96.986% identity (98.904% similar) in 365 aa overlap (13-376:1-365) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|740 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::: gi|740 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPASPKSKKKSRKGRPR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL :::.::: ::.::::::::::::::::::::::::::.:::::::::::::::::::::: gi|740 KTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG 290 300 310 320 330 340 370 mKIAA1 RVAIDQQ-LTQQQLNGN .: :::: ::::::::: gi|740 KVEIDQQQLTQQQLNGN 350 360 >>gi|122132337|sp|Q08DR0.1|PHF6_BOVIN RecName: Full=PHD (365 aa) initn: 2408 init1: 2408 opt: 2444 Z-score: 2814.5 bits: 529.4 E(): 4.6e-148 Smith-Waterman score: 2444; 96.986% identity (98.904% similar) in 365 aa overlap (13-376:1-365) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|122 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|122 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL :::.::: ::.::::::::::::::::::::::::::.::::::::::::::::.::::: gi|122 KTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENQARGKL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG 290 300 310 320 330 340 370 mKIAA1 RVAIDQQ-LTQQQLNGN .: :::: ::::::::: gi|122 KVEIDQQQLTQQQLNGN 350 360 >>gi|74008481|ref|XP_866100.1| PREDICTED: similar to PHD (366 aa) initn: 1447 init1: 1447 opt: 2432 Z-score: 2800.7 bits: 526.9 E(): 2.7e-147 Smith-Waterman score: 2432; 96.721% identity (98.634% similar) in 366 aa overlap (13-376:1-366) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|740 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEA-DLEESFNEHELEPSSPKTKKKSRKGRP :::::::::::::::::::::::::::::::: :::::::::::::.:::.::::::::: gi|740 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNEHELEPASPKSKKKSRKGRP 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 RKTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGK ::::.::: ::.::::::::::::::::::::::::::.::::::::::::::::::::: gi|740 RKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGK 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 LHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPG 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 ATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 ATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSR 290 300 310 320 330 340 360 370 mKIAA1 GRVAIDQQ-LTQQQLNGN :.: :::: ::::::::: gi|740 GKVEIDQQQLTQQQLNGN 350 360 >>gi|194044956|ref|XP_001927436.1| PREDICTED: similar to (366 aa) initn: 1445 init1: 1445 opt: 2430 Z-score: 2798.4 bits: 526.4 E(): 3.7e-147 Smith-Waterman score: 2430; 96.721% identity (98.361% similar) in 366 aa overlap (13-376:1-366) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|194 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEA-DLEESFNEHELEPSSPKTKKKSRKGRP :::::::::::::::::::::::::::::::: :::::::::::::::::.::::::::: gi|194 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNEHELEPSSPKSKKKSRKGRP 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 RKTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGK ::::.::: ::.::::::::::::::::::::::::::.::::::::::::::::::::: gi|194 RKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGK 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 LHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPG 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 ATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSR 290 300 310 320 330 340 360 370 mKIAA1 GRVAIDQQ-LTQQQLNGN :.: ::: ::::::::: gi|194 GKVETDQQQLTQQQLNGN 350 360 >>gi|74008479|ref|XP_866088.1| PREDICTED: similar to PHD (361 aa) initn: 1406 init1: 1406 opt: 2388 Z-score: 2750.1 bits: 517.5 E(): 1.8e-144 Smith-Waterman score: 2388; 95.342% identity (97.534% similar) in 365 aa overlap (13-376:1-361) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|740 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::. ::::::::.:::.:::::::::: gi|740 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEG----IFNEHELEPASPKSKKKSRKGRPR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL :::.::: ::.::::::::::::::::::::::::::.:::::::::::::::::::::: gi|740 KTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG 290 300 310 320 330 340 370 mKIAA1 RVAIDQQ-LTQQQLNGN .: :::: ::::::::: gi|740 KVEIDQQQLTQQQLNGN 350 360 >>gi|148697171|gb|EDL29118.1| PHD finger protein 6, isof (335 aa) initn: 2307 init1: 2307 opt: 2307 Z-score: 2657.4 bits: 500.2 E(): 2.6e-139 Smith-Waterman score: 2307; 100.000% identity (100.000% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGRPR 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGKL 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA1 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGA 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA1 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRG ::::::::::::::::::::::::::::::::::: gi|148 TIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYK 310 320 330 370 mKIAA1 RVAIDQQLTQQQLNGN >>gi|57209488|emb|CAI41602.1| PHD finger protein 6 [Homo (324 aa) initn: 1233 init1: 1233 opt: 2182 Z-score: 2513.9 bits: 473.6 E(): 2.6e-131 Smith-Waterman score: 2182; 97.531% identity (99.074% similar) in 324 aa overlap (13-335:1-324) 10 20 30 40 50 60 mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF ::::.::::: ::::::::::::::::::::::::::::::::::::: gi|572 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLF 10 20 30 40 70 80 90 100 110 120 mKIAA1 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 SSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCA 50 60 70 80 90 100 130 140 150 160 170 mKIAA1 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEA-DLEESFNEHELEPSSPKTKKKSRKGRP :::::::::::::::::::::::::::::::: :::::::::::::::::.::::::::: gi|572 LHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNEHELEPSSPKSKKKSRKGRP 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 RKTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARGK ::::.::: ::.::::::::::::::::::::::::::.::::::::::::::::::::: gi|572 RKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGK 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 LHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 LHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPG 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 ATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSR :::::::::::::::::::::::::::::::::::: gi|572 ATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYK 290 300 310 320 360 370 mKIAA1 GRVAIDQQLTQQQLNGN 376 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 00:34:30 2009 done: Mon Mar 16 00:40:40 2009 Total Scan time: 844.670 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]