# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbh00219.fasta.nr -Q ../query/mKIAA1291.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1291, 496 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921234 sequences Expectation_n fit: rho(ln(x))= 4.9921+/-0.000187; mu= 12.2561+/- 0.010 mean_var=66.3988+/-13.069, 0's: 35 Z-trim: 35 B-trim: 756 in 1/65 Lambda= 0.157396 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|73972946|ref|XP_532148.2| PREDICTED: similar to (1211) 2476 571.4 4.6e-160 gi|126310084|ref|XP_001365932.1| PREDICTED: simila (1209) 2414 557.4 7.9e-156 gi|124297183|gb|AAI31661.1| Exportin 5 [Mus muscul (1204) 1885 437.2 1.1e-119 gi|81867644|sp|Q924C1.1|XPO5_MOUSE RecName: Full=E (1204) 1885 437.2 1.1e-119 gi|148691534|gb|EDL23481.1| exportin 5, isoform CR (1205) 1885 437.2 1.1e-119 gi|158631185|ref|NP_001102259.2| exportin 5 [Rattu (1204) 1857 430.9 9.3e-118 gi|120538537|gb|AAI28999.1| Exportin 5 [Xenopus tr (1207) 1787 415.0 5.7e-113 gi|38601845|emb|CAE51202.1| exportin 5 [Xenopus tr (1207) 1787 415.0 5.7e-113 gi|14249932|gb|AAH08347.1|AAH08347 Unknown (protei ( 610) 1712 397.7 4.5e-108 gi|6808074|emb|CAB70753.1| hypothetical protein [H ( 755) 1712 397.8 5.3e-108 gi|193786484|dbj|BAG51767.1| unnamed protein produ ( 832) 1712 397.8 5.7e-108 gi|39644631|gb|AAH09969.2| XPO5 protein [Homo sapi ( 929) 1712 397.9 6.2e-108 gi|12407633|gb|AAG53603.1|AF271159_1 RANBP21 [Homo (1204) 1712 397.9 7.6e-108 gi|57209079|emb|CAI42640.1| exportin 5 [Homo sapie (1204) 1712 397.9 7.6e-108 gi|74734245|sp|Q9HAV4.1|XPO5_HUMAN RecName: Full=E (1204) 1712 397.9 7.6e-108 gi|168278841|dbj|BAG11300.1| exportin-5 [synthetic (1204) 1712 397.9 7.6e-108 gi|194223542|ref|XP_001918271.1| PREDICTED: export ( 668) 1707 396.6 1.1e-107 gi|10434279|dbj|BAB14200.1| unnamed protein produc ( 668) 1707 396.6 1.1e-107 gi|12652757|gb|AAH00129.1| XPO5 protein [Homo sapi ( 280) 1702 395.2 1.2e-107 gi|158256340|dbj|BAF84141.1| unnamed protein produ (1204) 1707 396.8 1.7e-107 gi|7022297|dbj|BAA91547.1| unnamed protein product ( 280) 1697 394.1 2.6e-107 gi|73972940|ref|XP_852453.1| PREDICTED: similar to (1200) 1700 395.2 5e-107 gi|194677645|ref|XP_001790589.1| PREDICTED: simila (1118) 1698 394.7 6.5e-107 gi|12847151|dbj|BAB27455.1| unnamed protein produc ( 246) 1650 383.4 3.8e-104 gi|194039357|ref|XP_001929500.1| PREDICTED: simila (1204) 1632 379.8 2.2e-102 gi|74186812|dbj|BAC36152.2| unnamed protein produc ( 244) 1596 371.1 1.8e-100 gi|193785853|dbj|BAG51288.1| unnamed protein produ ( 645) 1571 365.7 2e-98 gi|57209077|emb|CAI42638.1| exportin 5 [Homo sapie ( 700) 1571 365.8 2.2e-98 gi|149571092|ref|XP_001515357.1| PREDICTED: hypoth ( 422) 1566 364.5 3.2e-98 gi|194223546|ref|XP_001918274.1| PREDICTED: export ( 645) 1553 361.7 3.4e-97 gi|118088066|ref|XP_419501.2| PREDICTED: similar t (1209) 1478 344.8 7.5e-92 gi|12848870|dbj|BAB28117.1| unnamed protein produc ( 264) 1343 313.7 3.9e-83 gi|73972942|ref|XP_865751.1| PREDICTED: similar to ( 207) 1288 301.1 1.8e-79 gi|10435364|dbj|BAB14572.1| unnamed protein produc ( 630) 1222 286.5 1.4e-74 gi|73972944|ref|XP_865768.1| PREDICTED: similar to (1063) 1223 286.9 1.8e-74 gi|57209078|emb|CAI42639.1| exportin 5 [Homo sapie ( 666) 1219 285.8 2.4e-74 gi|148691535|gb|EDL23482.1| exportin 5, isoform CR ( 907) 1138 267.5 1e-68 gi|149069362|gb|EDM18803.1| exportin 5 (predicted) ( 907) 1123 264.1 1.1e-67 gi|119624612|gb|EAX04207.1| exportin 5, isoform CR ( 907) 1003 236.9 1.8e-59 gi|167871247|gb|EDS34630.1| chromosome region main (1226) 971 229.7 3.5e-57 gi|157013340|gb|EAA00125.3| AGAP011888-PA [Anophel (1233) 918 217.7 1.5e-53 gi|108874516|gb|EAT38741.1| chromosome region main (1224) 912 216.3 3.7e-53 gi|190649454|gb|EDV46732.1| GG18037 [Drosophila er (1243) 869 206.5 3.3e-50 gi|190629129|gb|EDV44546.1| GF20273 [Drosophila an (1253) 869 206.5 3.3e-50 gi|194203140|gb|EDX16716.1| GD24453 [Drosophila si ( 579) 865 205.4 3.4e-50 gi|194134674|gb|EDW56190.1| GM22721 [Drosophila se (1203) 866 205.8 5.1e-50 gi|194150627|gb|EDW66311.1| GJ15622 [Drosophila vi (1238) 866 205.9 5.2e-50 gi|194160242|gb|EDW75143.1| GK19857 [Drosophila wi (1252) 866 205.9 5.3e-50 gi|193906697|gb|EDW05564.1| GI11023 [Drosophila mo (1239) 863 205.2 8.4e-50 gi|7293623|gb|AAF48995.1| Ranbp21 [Drosophila mela (1241) 863 205.2 8.4e-50 >>gi|73972946|ref|XP_532148.2| PREDICTED: similar to exp (1211 aa) initn: 2513 init1: 1304 opt: 2476 Z-score: 3030.0 bits: 571.4 E(): 4.6e-160 Smith-Waterman score: 2835; 83.037% identity (92.308% similar) in 507 aa overlap (1-496:717-1211) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::..:: ::.::::::::::: gi|739 DVDAFIAYVGADRQSCDPGLDDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFV 690 700 710 720 730 740 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK ::::::::::::::::::::.::::::::.:::::::.::::.:::::::::::..: :: gi|739 VGYTPSGNPIFRNPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLEVEK 750 760 770 780 790 800 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS .:::::::::::.:: :::.:.:::::::: :::::.:::::::::::::::::: ::. gi|739 SAILGLPQPLLELNDSPVYKTVLERMQRFFCTLYENCFHILGKAGPSMQQDFYTVEHLAT 810 820 830 840 850 860 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP :::.:::::::::::.::: ::... :::::::: ::::.:.::::::::::::: gi|739 QLLSSAFVNLNNIPDYRLRPMLHILSKPLVLFCPPEHYEALVSPILGPLFTYLHM----- 870 880 890 900 910 920 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::.::::::.:::::. :..:::::::::::::::::::.:::: .::: gi|739 -------RLSQKWQVINQRSLLCGEDDTADENPESQEMLEEQLVRMLTREVMDLITVCCV 930 940 950 960 970 280 290 300 310 mKIAA1 SKKTADHTAAPTADGD-----------DEEMMATEVAPSSVVELTDLGKCLMKHEDVCTA :::.::: .:: .::: :.:::::::.::...:::::::::::::::::: gi|739 SKKSADHGTAPPTDGDGWSLTFCSLLSDDEMMATEVTPSTMAELTDLGKCLMKHEDVCTA 980 990 1000 1010 1020 1030 320 330 340 350 360 370 mKIAA1 LLITAFNSLTWKDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHD :::::::::.:::::::::.::::::::::::.::::::::::::::::::::: ::::: gi|739 LLITAFNSLAWKDTLSCQRTTTQLCWPLLKQVLSGTLLADAVTWLFTSVLKGLQTHGQHD 1040 1050 1060 1070 1080 1090 380 390 400 410 420 430 mKIAA1 GCMASLVHLAFQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRK ::::::::::::::::::::::::::::::::.:.:.::::::::::::.:::.:::::: gi|739 GCMASLVHLAFQIYEALRPRYLEIRAVMEQIPDIQKDSLDQFDCKLLNPTLQKVADKRRK 1100 1110 1120 1130 1140 1150 440 450 460 470 480 490 mKIAA1 DHFKRLIAGCIGKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP :.::::::::::::::::::::::::::: :::: ::::::::::.::::::::::: gi|739 DQFKRLIAGCIGKPLGEQFRKEVHIKNLPSLFKKTKPMLETEVLDNEEGGLATIFEP 1160 1170 1180 1190 1200 1210 >>gi|126310084|ref|XP_001365932.1| PREDICTED: similar to (1209 aa) initn: 2440 init1: 1288 opt: 2414 Z-score: 2954.0 bits: 557.4 E(): 7.9e-156 Smith-Waterman score: 2709; 78.854% identity (91.107% similar) in 506 aa overlap (1-496:716-1209) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV .:::::.::::..:. ::.::::::::::: gi|126 DADAFIAYVGADNKICEPGLEDANGLNRSRISFCVYTILGVVKRARWPTDLEEAKAGGFV 690 700 710 720 730 740 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::::::::::::::::..:.::::::::.::::::::::.:.:... :.::::..: :: gi|126 VGYTPSGNPIFRNPCTEHVLKLLDNLLALIRTHNTLYTPEVLAKLGDNFSKALDMLEVEK 750 760 770 780 790 800 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS .:::::::::::. : :::.:.::::: :: :::::.::::::: :::::::::::::. gi|126 NAILGLPQPLLELYDSPVYKTVLERMQGFFCTLYENCFHILGKAGSSMQQDFYTVEDLAT 810 820 830 840 850 860 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP :::.:::.:::.:::.::: :::::::::::::: ::::.:.::::::::::::: gi|126 QLLNSAFINLNSIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHM----- 870 880 890 900 910 920 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::.::::::.::::.: :..::::::::::::::.::::.:::: .::: gi|126 -------RLSQKWQVINQRSLLCGEEETADENPESQEMLEEQLVRLLTREVMDLITVCCV 930 940 950 960 970 280 290 300 310 320 mKIAA1 SKKTADHTA----------APTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTAL ::: :.:.. . ::::.::::. ::::::.. ::::::::::::::::::: gi|126 SKKGAEHNSTTNTTTTTNSSTTADGEDEEMVCTEVAPSAMPELTDLGKCLMKHEDVCTAL 980 990 1000 1010 1020 1030 330 340 350 360 370 380 mKIAA1 LITAFNSLTWKDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDG :::::.::.:::::::::.::::::::::::.:::::.:::::.:::::::::::::::: gi|126 LITAFTSLAWKDTLSCQRTTTQLCWPLLKQVLSGTLLSDAVTWFFTSVLKGLQMHGQHDG 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 mKIAA1 CMASLVHLAFQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKD :::.::::::::::::::::::.::::::::::.::::::::::::::.::: :::::: gi|126 CMAALVHLAFQIYEALRPRYLEVRAVMEQIPEIQKESLDQFDCKLLNPTLQKINDKRRKD 1100 1110 1120 1130 1140 1150 450 460 470 480 490 mKIAA1 HFKRLIAGCIGKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP :::::::::::::::::::::::::::: :::: ::.:: .::..:.: :.::::: gi|126 HFKRLIAGCIGKPLGEQFRKEVHIKNLPSLFKKTKPLLECDVLENEDGCLSTIFEP 1160 1170 1180 1190 1200 >>gi|124297183|gb|AAI31661.1| Exportin 5 [Mus musculus] (1204 aa) initn: 1899 init1: 1875 opt: 1885 Z-score: 2304.8 bits: 437.2 E(): 1.1e-119 Smith-Waterman score: 3215; 97.581% identity (97.581% similar) in 496 aa overlap (1-496:721-1204) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::::::::::::::::::::: gi|124 DIDSFIAYVGADLKSCDPAVEDPCGLNRARMSFCVYSILGVMRRTSWPSDLEEAKAGGFV 700 710 720 730 740 750 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK 760 770 780 790 800 810 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS 820 830 840 850 860 870 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHM----- 880 890 900 910 920 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 -------RLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV 930 940 950 960 970 280 290 300 310 320 330 mKIAA1 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW 980 990 1000 1010 1020 1030 340 350 360 370 380 390 mKIAA1 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF 1040 1050 1060 1070 1080 1090 400 410 420 430 440 450 mKIAA1 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI 1100 1110 1120 1130 1140 1150 460 470 480 490 mKIAA1 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP :::::::::::::::::::::::::::::::::::::::::::::: gi|124 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP 1160 1170 1180 1190 1200 >>gi|81867644|sp|Q924C1.1|XPO5_MOUSE RecName: Full=Expor (1204 aa) initn: 1899 init1: 1875 opt: 1885 Z-score: 2304.8 bits: 437.2 E(): 1.1e-119 Smith-Waterman score: 3215; 97.581% identity (97.581% similar) in 496 aa overlap (1-496:721-1204) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::::::::::::::::::::: gi|818 DIDSFIAYVGADLKSCDPAVEDPCGLNRARMSFCVYSILGVMRRTSWPSDLEEAKAGGFV 700 710 720 730 740 750 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK 760 770 780 790 800 810 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS 820 830 840 850 860 870 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHM----- 880 890 900 910 920 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 -------RLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV 930 940 950 960 970 280 290 300 310 320 330 mKIAA1 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW 980 990 1000 1010 1020 1030 340 350 360 370 380 390 mKIAA1 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF 1040 1050 1060 1070 1080 1090 400 410 420 430 440 450 mKIAA1 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI 1100 1110 1120 1130 1140 1150 460 470 480 490 mKIAA1 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP :::::::::::::::::::::::::::::::::::::::::::::: gi|818 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP 1160 1170 1180 1190 1200 >>gi|148691534|gb|EDL23481.1| exportin 5, isoform CRA_a (1205 aa) initn: 3003 init1: 1875 opt: 1885 Z-score: 2304.8 bits: 437.2 E(): 1.1e-119 Smith-Waterman score: 3199; 97.183% identity (97.384% similar) in 497 aa overlap (1-496:721-1205) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::::::::::::::::::::: gi|148 DIDSFIAYVGADLKSCDPAVEDPCGLNRARMSFCVYSILGVMRRTSWPSDLEEAKAGGFV 700 710 720 730 740 750 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK 760 770 780 790 800 810 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS 820 830 840 850 860 870 160 170 180 190 200 mKIAA1 QLLGSAFVNLNNIPDFRLRSML-RVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLST :::::::::::::::::::::. ::::::::::::::::::::::::::::::::: gi|148 QLLGSAFVNLNNIPDFRLRSMVARVFVKPLVLFCPSEHYETLISPILGPLFTYLHM---- 880 890 900 910 920 210 220 230 240 250 260 mKIAA1 PALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACC :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 --------RLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACC 930 940 950 960 970 270 280 290 300 310 320 mKIAA1 VSKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VSKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLT 980 990 1000 1010 1020 1030 330 340 350 360 370 380 mKIAA1 WKDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WKDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLA 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 mKIAA1 FQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGC 1100 1110 1120 1130 1140 1150 450 460 470 480 490 mKIAA1 IGKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IGKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP 1160 1170 1180 1190 1200 >>gi|158631185|ref|NP_001102259.2| exportin 5 [Rattus no (1204 aa) initn: 1871 init1: 1847 opt: 1857 Z-score: 2270.4 bits: 430.9 E(): 9.3e-118 Smith-Waterman score: 3160; 95.363% identity (96.976% similar) in 496 aa overlap (1-496:721-1204) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::::::.:::::::::::::: gi|158 DIDAFIAYVGADLKSCDPAAQDPCGLNRARMSFCVYSILGVMRRTTWPSDLEEAKAGGFV 700 710 720 730 740 750 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VGYTPSGNPVFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK 760 770 780 790 800 810 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS ::::::::::::.:::::::: :::::::::::::::::::::::::::::::::::::. gi|158 TAILGLPQPLLEINDHPVYRTILERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAT 820 830 840 850 860 870 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP :::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|158 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPPEHYETLISPILGPLFTYLHM----- 880 890 900 910 920 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV :::::::::::::.:::::::::::::::::::::::::::::.::::::::: gi|158 -------RLSQKWHVINQRSVLCGEDEIAEDNPESQEMLEEQLVRMLTREVMDLIMACCV 930 940 950 960 970 280 290 300 310 320 330 mKIAA1 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW :::::.:::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SKKTAEHTATPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW 980 990 1000 1010 1020 1030 340 350 360 370 380 390 mKIAA1 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF 1040 1050 1060 1070 1080 1090 400 410 420 430 440 450 mKIAA1 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI 1100 1110 1120 1130 1140 1150 460 470 480 490 mKIAA1 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP ::::::::::::::::::::::: :::::::::::::::::::::: gi|158 GKPLGEQFRKEVHIKNLPWLFKKSKPMLETEVLDSEEGGLATIFEP 1160 1170 1180 1190 1200 >>gi|120538537|gb|AAI28999.1| Exportin 5 [Xenopus tropic (1207 aa) initn: 1236 init1: 428 opt: 1787 Z-score: 2184.5 bits: 415.0 E(): 5.7e-113 Smith-Waterman score: 1787; 52.268% identity (80.079% similar) in 507 aa overlap (1-496:716-1207) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV .:.:....::...:..::.: ::::::::: gi|120 GPDEFISFVGADILMHQQEEEDRGAPSRSQLSLCTFALLGMVKRSQWPTDPEEAKAGGFV 690 700 710 720 730 740 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK .::. :: :..::: .. .:..::.::::.:: :.:: ::.. ::.. : :.:... .. gi|120 IGYSASGAPLLRNPGARLLLKVLDSLLALIRTMNNLYLPEVMGKMGDTFCKSLNMLAMDR 750 760 770 780 790 800 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS ..: : .: : :. .:.: :.: ::. :..:: .:::. :::: ..::.: :::: gi|120 KLLMGTSQSAIEDCDLPA-KTNLSRIQFFFASLFDNCCQILGHCGPSMPHEFYSVPDLAS 810 820 830 840 850 860 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP .::.:.:.: .:.::.::: .:::.::::.: ::.:.::.:. ::::::. ::. gi|120 RLLSSVFTNADNVPDYRLRLILRVLVKPLILSCPAEKYESLVCPILGPLIIYLY------ 870 880 890 900 910 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::: ::::... :: ::. : ::.:::::::.::::..::: .::. gi|120 ------QRLSQKWLSINQRTVVSEEDYTEEDS-ECQEVLEEQLVRQLTREVVDLIGSCCI 920 930 940 950 960 970 280 290 300 310 320 mKIAA1 SKKTADHTA--------APTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLI ..:. : : : ::::.::::.::.. . .:::.::. :. .:.. :.::. gi|120 ARKSNDFCASGADVGHSAGQADGDEEEMMTTEAVAPGPIELTELGQFLLANEEISTSLLV 980 990 1000 1010 1020 1030 330 340 350 360 370 380 mKIAA1 TAFNSLTWKDTLSCQRATTQLCWPLLKQVMSGTLL-ADAVTWLFTSVLKGLQMHGQHDGC .:. :.::::..::.:...:::::::::::.. : :::. .:...: ::: ::::..: gi|120 ISFSPLVWKDTMACQKAASHLCWPLLKQVMSASPLPADAALCVFSNILCGLQTHGQHESC 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 mKIAA1 MASLVHLAFQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDH ::.:.:: ::::::.: :.:..:::.:.. ..::.::: ::: : ::...:.:..: gi|120 KFPLVQLSFQTYEALRPQYPELRGLMEQVPDVPRDSLEQFDAKLLAPP-QKVGEKKRREH 1100 1110 1120 1130 1140 1150 450 460 470 480 490 mKIAA1 FKRLIAGCIGKPLGEQFRKEVHIKNLPWLFKKP-KPMLETE-VLDSEEGGLATIFEP ::.::::::::::::::::::::.::: :::: : ... ::.: ...:...:.: gi|120 FKKLIAGCIGKPLGEQFRKEVHIRNLPALFKKKTKSAPDSDSVLSSCDSSLVALFQP 1160 1170 1180 1190 1200 >>gi|38601845|emb|CAE51202.1| exportin 5 [Xenopus tropic (1207 aa) initn: 1236 init1: 428 opt: 1787 Z-score: 2184.5 bits: 415.0 E(): 5.7e-113 Smith-Waterman score: 1787; 52.268% identity (80.079% similar) in 507 aa overlap (1-496:716-1207) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV .:.:....::...:..::.: ::::::::: gi|386 GPDEFISFVGADILMHQQEEEDRGAPSRSQLSLCTFALLGMVKRSQWPTDPEEAKAGGFV 690 700 710 720 730 740 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK .::. :: :..::: .. .:..::.::::.:: :.:: ::.. ::.. : :.:... .. gi|386 IGYSASGAPLLRNPGARLLLKVLDSLLALIRTMNNLYLPEVMGKMGDTFCKSLNMLAMDR 750 760 770 780 790 800 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS ..: : .: : :. .:.: :.: ::. :..:: .:::. :::: ..::.: :::: gi|386 KLLMGTSQSAIEDCDLPA-KTNLSRIQFFFASLFDNCCQILGHCGPSMPHEFYSVPDLAS 810 820 830 840 850 860 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP .::.:.:.: .:.::.::: .:::.::::.: ::.:.::.:. ::::::. ::. gi|386 RLLSSVFTNADNVPDYRLRLILRVLVKPLILSCPAEKYESLVCPILGPLIIYLY------ 870 880 890 900 910 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::: ::::... :: ::. : ::.:::::::.::::..::: .::. gi|386 ------QRLSQKWLSINQRTVVSEEDYTEEDS-ECQEVLEEQLVRQLTREVVDLIGSCCI 920 930 940 950 960 970 280 290 300 310 320 mKIAA1 SKKTADHTA--------APTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLI ..:. : : : ::::.::::.::.. . .:::.::. :. .:.. :.::. gi|386 ARKSNDFCASGAEVGHSAGQADGDEEEMMTTEAVAPGPIELTELGQFLLANEEISTSLLV 980 990 1000 1010 1020 1030 330 340 350 360 370 380 mKIAA1 TAFNSLTWKDTLSCQRATTQLCWPLLKQVMSGTLL-ADAVTWLFTSVLKGLQMHGQHDGC .:. :.::::..::.:...:::::::::::.. : :::. .:...: ::: ::::..: gi|386 ISFSPLVWKDTMACQKAASHLCWPLLKQVMSASPLPADAALCVFSNILCGLQTHGQHESC 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 mKIAA1 MASLVHLAFQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDH ::.:.:: ::::::.: :.:..:::.:.. ..::.::: ::: : ::...:.:..: gi|386 KFPLVQLSFQTYEALRPQYPELRGLMEQVPDVPRDSLEQFDAKLLAPP-QKVGEKKRREH 1100 1110 1120 1130 1140 1150 450 460 470 480 490 mKIAA1 FKRLIAGCIGKPLGEQFRKEVHIKNLPWLFKKP-KPMLETE-VLDSEEGGLATIFEP ::.::::::::::::::::::::.::: :::: : ... ::.: ...:...:.: gi|386 FKKLIAGCIGKPLGEQFRKEVHIRNLPALFKKKTKSAPDSDSVLSSCDSSLVALFQP 1160 1170 1180 1190 1200 >>gi|14249932|gb|AAH08347.1|AAH08347 Unknown (protein fo (610 aa) initn: 1702 init1: 1702 opt: 1712 Z-score: 2096.7 bits: 397.7 E(): 4.5e-108 Smith-Waterman score: 2897; 85.887% identity (94.960% similar) in 496 aa overlap (1-496:127-610) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::..:: ::.::::::::::: gi|142 DVDAFIAYVGTDQKSCDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFV 100 110 120 130 140 150 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::: :::::::::::::::.::::::::.:::::::.::::.:::::::::::....:: gi|142 VGYTSSGNPIFRNPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLDAEK 160 170 180 190 200 210 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS .:::::::::::.:: ::..:.::::::::. :::::.:::::::::::::::::::::. gi|142 SAILGLPQPLLELNDSPVFKTVLERMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLAT 220 230 240 250 260 270 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP :::.:::::::::::.::: :::::::::::::: ::::.:.::::::::::::: gi|142 QLLSSAFVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHM----- 280 290 300 310 320 330 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::.::::::.:::::: :..:::::::::::::::::::.:::: .::: gi|142 -------RLSQKWQVINQRSLLCGEDEAADENPESQEMLEEQLVRMLTREVMDLITVCCV 340 350 360 370 380 280 290 300 310 320 330 mKIAA1 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW ::: :::..:: :::::::::::::.::...:::::::::::::::::::::::::::.: gi|142 SKKGADHSSAPPADGDDEEMMATEVTPSAMAELTDLGKCLMKHEDVCTALLITAFNSLAW 390 400 410 420 430 440 340 350 360 370 380 390 mKIAA1 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF ::::::::.:.::::::::::.:::::::::::::::::::::::::::::::::::::: gi|142 KDTLSCQRTTSQLCWPLLKQVLSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF 450 460 470 480 490 500 400 410 420 430 440 450 mKIAA1 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI :::::::::::::::::::::::.:.::::::::::::::::.:::::::.::::::::: gi|142 QIYEALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKRLIAGCI 510 520 530 540 550 560 460 470 480 490 mKIAA1 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP :::::::::::::::::: :::: ::::::::::.. ::::::::: gi|142 GKPLGEQFRKEVHIKNLPSLFKKTKPMLETEVLDNDGGGLATIFEP 570 580 590 600 610 >>gi|6808074|emb|CAB70753.1| hypothetical protein [Homo (755 aa) initn: 1702 init1: 1702 opt: 1712 Z-score: 2095.4 bits: 397.8 E(): 5.3e-108 Smith-Waterman score: 2897; 85.887% identity (94.960% similar) in 496 aa overlap (1-496:272-755) 10 20 30 mKIAA1 MSFCVYSILGVMRRTSWPSDLEEAKAGGFV :::::::::::..:: ::.::::::::::: gi|680 DVDAFIAYVGTDQKSCDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFV 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA1 VGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEK :::: :::::::::::::::.::::::::.:::::::.::::.:::::::::::....:: gi|680 VGYTSSGNPIFRNPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLDAEK 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA1 TAILGLPQPLLEFNDHPVYRTTLERMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLAS .:::::::::::.:: ::..:.::::::::. :::::.:::::::::::::::::::::. gi|680 SAILGLPQPLLELNDSPVFKTVLERMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLAT 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA1 QLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMPLSTP :::.:::::::::::.::: :::::::::::::: ::::.:.::::::::::::: gi|680 QLLSSAFVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHM----- 430 440 450 460 470 220 230 240 250 260 270 mKIAA1 ALVLSPQRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCV ::::::.::::::.:::::: :..:::::::::::::::::::.:::: .::: gi|680 -------RLSQKWQVINQRSLLCGEDEAADENPESQEMLEEQLVRMLTREVMDLITVCCV 480 490 500 510 520 280 290 300 310 320 330 mKIAA1 SKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTW ::: :::..:: :::::::::::::.::...:::::::::::::::::::::::::::.: gi|680 SKKGADHSSAPPADGDDEEMMATEVTPSAMAELTDLGKCLMKHEDVCTALLITAFNSLAW 530 540 550 560 570 580 340 350 360 370 380 390 mKIAA1 KDTLSCQRATTQLCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF ::::::::.:.::::::::::.:::::::::::::::::::::::::::::::::::::: gi|680 KDTLSCQRTTSQLCWPLLKQVLSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAF 590 600 610 620 630 640 400 410 420 430 440 450 mKIAA1 QIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCI :::::::::::::::::::::::.:.::::::::::::::::.:::::::.::::::::: gi|680 QIYEALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKRLIAGCI 650 660 670 680 690 700 460 470 480 490 mKIAA1 GKPLGEQFRKEVHIKNLPWLFKKPKPMLETEVLDSEEGGLATIFEP :::::::::::::::::: :::: ::::::::::.. ::::::::: gi|680 GKPLGEQFRKEVHIKNLPSLFKKTKPMLETEVLDNDGGGLATIFEP 710 720 730 740 750 496 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 14:09:02 2009 done: Fri Mar 13 14:16:01 2009 Total Scan time: 939.530 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]