FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0244.ptfa, 1184 aa vs ./tmplib.26680 library 1767833 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 10.2552+/-0.00866; mu= -5.2968+/- 0.573 mean_var=441.0803+/-105.648, 0's: 0 Z-trim: 7 B-trim: 0 in 0/36 Lambda= 0.0611 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0333 ( 1201 res) mbg16015 (1201) 655 73 3.2e-13 mKIAA1172 ( 1200 res) mfj66157 (1200) 267 39 0.0062 >>mKIAA0333 ( 1201 res) mbg16015 (1201 aa) initn: 1175 init1: 642 opt: 655 Z-score: 329.8 bits: 73.0 E(): 3.2e-13 Smith-Waterman score: 1046; 40.335% identity (53.056% ungapped) in 538 aa overlap (48-471:672-1194) 20 30 40 50 60 70 mKIAA0 STALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATSKPSADQIRQSVRHSLKDIL :: : : : :.:.. ::::..:.:::.:: mKIAA0 KLPGSAAVVGVTRKPMSANVPAASPAPGRLGP-VSP--APSQPNS-QIRQNIRRSLKEIL 650 660 670 680 690 80 90 100 110 120 130 mKIAA0 MKRLTDSN-LKIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFK ::..::. : . :....:.: .::::.:..:. :: .::.::::.:::::::::. ::. mKIAA0 WKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFH 700 710 720 730 740 750 140 150 160 170 180 190 mKIAA0 KVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGE .::. :.. .:.::.::::.::::. : .. .. .:: : : . : : : : mKIAA0 RVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLNESK-----KNTTKPE 760 770 780 790 800 810 200 210 220 230 240 250 mKIAA0 I--EIESDAPMKEQEAAIEIQEPSANKSMEKPDVSEKQKEEVDSTSKDTTSQHRQHLFDL ..:.. :....: :. :. . :: . . .: :::::::: ::::: mKIAA0 TIPDMEDSPPVSDSEE----QQESVRAAPEKS--AAPLLDVFSSMLKDTTSQHRAHLFDL 820 830 840 850 860 260 270 280 290 mKIAA0 NCKICIGRMAPPIDDLSPKTVKVVVGGAR-----KHSD-------NEA-ESLADAL---- ::::: :.. :. .:: :. ... . .:.. : : :..::.: mKIAA0 NCKICTGQVPSSEDEPAPKKQKLSASSKKEDFKPRHDSSPPNAVPNTADEGIADTLPENA 870 880 890 900 910 920 300 310 mKIAA0 SSTTNILTSDLFEEEK--QESP-------------------------------------- : ::.: .:.: ::: mKIAA0 SEPDPESTSSLNQERKCFPESPGDSHPEPSSLGGLSPSSASGGSGVVTTVTMSGRDPRTA 930 940 950 960 970 980 320 330 mKIAA0 -------------------------------------------KSTFSPTPR----PEMP : . :: :: : : mKIAA0 LSGSCTVTASMAAHLDNSQASETKLDMIKPALTSAVVPKSILAKPSSSPDPRYLSVPPSP 990 1000 1010 1020 1030 1040 340 350 360 370 380 mKIAA0 GTVEVEST-------FLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQV . : .: ::.::: :::::::: :::::::::::::: .::.:::::.:.. mKIAA0 SISESRSPPEGDTTLFLSRLNTIWKGFINMQSVAKFVTKAYPVSGCLDYLSEDLPDTIHI 1050 1060 1070 1080 1090 1100 390 400 410 420 430 440 mKIAA0 GGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNM ::::.:.:::::: :.:.: .::.:..:: :.:::....: :..::::: :.::.::: mKIAA0 GGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYFSSRGRFGVVANNN 1110 1120 1130 1140 1150 1160 450 460 470 480 490 500 mKIAA0 KQVKDMYLIPLGAADKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRPHSASAGPSHTG ..:::.:::::.: : .: :.::.::: mKIAA0 RHVKDLYLIPLSAKDPVPSKLLPFEGPGKHPVSGR 1170 1180 1190 1200 >>mKIAA1172 ( 1200 res) mfj66157 (1200 aa) initn: 151 init1: 151 opt: 267 Z-score: 145.0 bits: 38.9 E(): 0.0062 Smith-Waterman score: 275; 33.333% identity (38.542% ungapped) in 222 aa overlap (940-1150:934-1136) 910 920 930 940 950 960 mKIAA0 GGNTCQSEFPSKSVSFTCRSSSPRASTNFSPMRPQQPNLQHLKSSPPGFPFPGPQNF--- : ::. :...: .:: ::: .: mKIAA1 TGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMH--RGPP----PGPGGFAMP 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA0 PPQNMFG-FPPHLSPPLLPP---PGFGFPQNPPMVPWPPVHVPGQPQRMMGPLSQASRYM ::..: : :::: :.. : ::.: : : . :::.. : .: .. . mKIAA1 PPHGMKGPFPPH--GPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQ 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA0 GPQNFYQVKDIRRPE-RRHSDPWGRQDQQQPDRPFNRGKGDRQRFYSDSHHLKRERHDKD ::. : . ..: ... : :.:..: :: :. :..:: : : ..: mKIAA1 -PQQPPQQSPSQQPAPAQQQPPQFRNDSRQQ---FNSGR-DQERFGRRSFG---SRVEND 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 mKIAA0 WEQESERHRHRDRS--QERDRDRKSKEEAAAHKD-KERPRLSHGDRAPDGKASRDGKSAD :. . :. :: : ..:. :.: .. :.: .:: : : : : : . ::: .: mKIAA1 RERYGSRNDDRDNSNRERREWGRRSPDRDR-HRDLEERSRRSSGHRDRD-RDSRDRESRR 1070 1080 1090 1100 1110 1120 1140 1150 1160 1170 1180 mKIAA0 KKPDRPKGEDHEKEKERDKSKHKEGEKDRERYHKDRDHTDRVKSKR .: . : : :: mKIAA1 EKEENRK-EKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEATS 1130 1140 1150 1160 1170 1180 1184 residues in 1 query sequences 1767833 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:15:39 2006 done: Mon Mar 27 10:15:40 2006 Scan time: 1.130 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]