# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg21704.fasta.nr -Q ../query/mKIAA1778.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1778, 227 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917386 sequences Expectation_n fit: rho(ln(x))= 5.6732+/-0.000192; mu= 7.0631+/- 0.011 mean_var=95.6446+/-18.439, 0's: 35 Z-trim: 40 B-trim: 156 in 1/66 Lambda= 0.131143 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74192609|dbj|BAE43079.1| unnamed protein produc ( 327) 1544 301.6 9.6e-80 gi|50400892|sp|Q6WVG3.1|KCD12_MOUSE RecName: Full= ( 327) 1544 301.6 9.6e-80 gi|149050122|gb|EDM02446.1| rCG36961 [Rattus norve ( 327) 1540 300.8 1.6e-79 gi|109501957|ref|XP_344451.3| PREDICTED: similar t ( 427) 1540 300.9 2e-79 gi|109502891|ref|XP_001076656.1| PREDICTED: simila ( 430) 1540 300.9 2e-79 gi|73989376|ref|XP_542614.2| PREDICTED: similar to ( 697) 1509 295.2 1.7e-77 gi|114650126|ref|XP_001137708.1| PREDICTED: simila ( 273) 1499 293.0 3.1e-77 gi|109120959|ref|XP_001085454.1| PREDICTED: simila ( 325) 1499 293.1 3.5e-77 gi|50401124|sp|Q96CX2.1|KCD12_HUMAN RecName: Full= ( 325) 1495 292.3 5.9e-77 gi|193785879|dbj|BAG54666.1| unnamed protein produ ( 325) 1495 292.3 5.9e-77 gi|76631732|ref|XP_873531.1| PREDICTED: similar to ( 326) 1494 292.1 6.8e-77 gi|126337578|ref|XP_001362464.1| PREDICTED: hypoth ( 330) 1475 288.5 8.2e-76 gi|54311195|gb|AAH84768.1| Kctd12 protein [Xenopus ( 324) 1004 199.4 5.4e-49 gi|115312929|gb|AAI24006.1| Kctd12 protein [Xenopu ( 324) 1004 199.4 5.4e-49 gi|109730383|gb|AAI16648.1| Kctd12 protein [Mus mu ( 159) 993 197.1 1.4e-48 gi|149481756|ref|XP_001512997.1| PREDICTED: simila ( 403) 884 176.8 4.4e-42 gi|224043494|ref|XP_002199513.1| PREDICTED: simila ( 183) 876 175.0 6.9e-42 gi|47220171|emb|CAG07312.1| unnamed protein produc ( 280) 796 160.0 3.4e-37 gi|50776278|ref|XP_423258.1| PREDICTED: hypothetic ( 294) 757 152.6 5.9e-35 gi|28269316|gb|AAM83194.1| leftover [Danio rerio] ( 288) 745 150.4 2.8e-34 gi|59725685|gb|AAW92112.1| righton [Danio rerio] ( 271) 743 150.0 3.5e-34 gi|158254037|gb|AAI54160.1| Kctd12.2 protein [Dani ( 282) 743 150.0 3.6e-34 gi|149640133|ref|XP_001513876.1| PREDICTED: hypoth ( 294) 740 149.4 5.5e-34 gi|224098310|ref|XP_002199011.1| PREDICTED: hypoth ( 286) 732 147.9 1.5e-33 gi|115313476|gb|AAI24025.1| LOC100124783 protein [ ( 287) 730 147.5 2e-33 gi|47222945|emb|CAF99101.1| unnamed protein produc ( 283) 726 146.8 3.4e-33 gi|47230535|emb|CAF99728.1| unnamed protein produc ( 259) 719 145.4 7.9e-33 gi|194040738|ref|XP_001925952.1| PREDICTED: simila ( 289) 697 141.3 1.5e-31 gi|26340806|dbj|BAC34065.1| unnamed protein produc ( 292) 692 140.3 3e-31 gi|126342799|ref|XP_001370941.1| PREDICTED: hypoth ( 273) 683 138.6 9.2e-31 gi|109511639|ref|XP_001065910.1| PREDICTED: simila ( 205) 680 137.9 1.1e-30 gi|109510582|ref|XP_001061376.1| PREDICTED: simila ( 121) 677 137.2 1.1e-30 gi|73975242|ref|XP_853341.1| PREDICTED: similar to ( 359) 658 134.0 3e-29 gi|126331671|ref|XP_001364789.1| PREDICTED: hypoth ( 471) 657 133.9 4.2e-29 gi|62202197|gb|AAH92820.1| Potassium channel tetra ( 281) 650 132.4 7.1e-29 gi|119893833|ref|XP_590048.3| PREDICTED: similar t ( 470) 648 132.2 1.4e-28 gi|59725658|gb|AAW92111.1| dexter [Danio rerio] ( 280) 644 131.2 1.6e-28 gi|59725611|gb|AAW92109.1| leftover/righton-like 2 ( 281) 642 130.9 2e-28 gi|148668159|gb|EDL00489.1| potassium channel tetr ( 256) 639 130.3 2.8e-28 gi|26349785|dbj|BAC38532.1| unnamed protein produc ( 346) 638 130.2 4e-28 gi|81886365|sp|Q50H33.1|KCTD8_MOUSE RecName: Full= ( 476) 637 130.1 5.8e-28 gi|26335653|dbj|BAC31527.1| unnamed protein produc ( 476) 637 130.1 5.8e-28 gi|26335191|dbj|BAC31296.1| unnamed protein produc ( 477) 637 130.1 5.8e-28 gi|26337365|dbj|BAC32368.1| unnamed protein produc ( 476) 635 129.7 7.5e-28 gi|74200034|dbj|BAC30262.2| unnamed protein produc ( 439) 632 129.1 1e-27 gi|122937799|gb|ABM68628.1| potassium channel tetr ( 476) 632 129.2 1.1e-27 gi|119613419|gb|EAW93013.1| hCG32906 [Homo sapiens ( 322) 629 128.5 1.2e-27 gi|74749707|sp|Q6ZWB6.1|KCTD8_HUMAN RecName: Full= ( 473) 628 128.4 1.9e-27 gi|109074127|ref|XP_001099551.1| PREDICTED: simila ( 473) 625 127.8 2.8e-27 gi|118090562|ref|XP_001233940.1| PREDICTED: hypoth ( 434) 623 127.4 3.4e-27 >>gi|74192609|dbj|BAE43079.1| unnamed protein product [M (327 aa) initn: 1544 init1: 1544 opt: 1544 Z-score: 1588.0 bits: 301.6 E(): 9.6e-80 Smith-Waterman score: 1544; 100.000% identity (100.000% similar) in 227 aa overlap (1-227:101-327) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|741 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 260 270 280 290 300 310 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|741 SEDKIWTSYTEYVFCRE 320 >>gi|50400892|sp|Q6WVG3.1|KCD12_MOUSE RecName: Full=BTB/ (327 aa) initn: 1544 init1: 1544 opt: 1544 Z-score: 1588.0 bits: 301.6 E(): 9.6e-80 Smith-Waterman score: 1544; 100.000% identity (100.000% similar) in 227 aa overlap (1-227:101-327) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|504 ELARDSKGRFFLDRDGFFFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 260 270 280 290 300 310 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|504 SEDKIWTSYTEYVFCRE 320 >>gi|149050122|gb|EDM02446.1| rCG36961 [Rattus norvegicu (327 aa) initn: 1540 init1: 1540 opt: 1540 Z-score: 1583.9 bits: 300.8 E(): 1.6e-79 Smith-Waterman score: 1540; 99.559% identity (100.000% similar) in 227 aa overlap (1-227:101-327) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|149 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|149 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLDLASRSPSG 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 260 270 280 290 300 310 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|149 SEDKIWTSYTEYVFCRE 320 >>gi|109501957|ref|XP_344451.3| PREDICTED: similar to Po (427 aa) initn: 1540 init1: 1540 opt: 1540 Z-score: 1582.3 bits: 300.9 E(): 2e-79 Smith-Waterman score: 1540; 99.559% identity (100.000% similar) in 227 aa overlap (1-227:201-427) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|109 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLDLASRSPSG 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 360 370 380 390 400 410 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|109 SEDKIWTSYTEYVFCRE 420 >>gi|109502891|ref|XP_001076656.1| PREDICTED: similar to (430 aa) initn: 1540 init1: 1540 opt: 1540 Z-score: 1582.3 bits: 300.9 E(): 2e-79 Smith-Waterman score: 1540; 99.559% identity (100.000% similar) in 227 aa overlap (1-227:204-430) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|109 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLDLASRSPSG 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 360 370 380 390 400 410 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|109 SEDKIWTSYTEYVFCRE 420 430 >>gi|73989376|ref|XP_542614.2| PREDICTED: similar to Pot (697 aa) initn: 1509 init1: 1509 opt: 1509 Z-score: 1547.8 bits: 295.2 E(): 1.7e-77 Smith-Waterman score: 1509; 98.238% identity (99.119% similar) in 227 aa overlap (1-227:471-697) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|739 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 450 460 470 480 490 500 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG ::::::::::::::::::.::::::::::::: :::: :::.:::::::::::::::::: gi|739 APQQPGPGPPPPHSRRGVQKEGSLGDELLPLGCAEPEQQEGSSAGAPSPTLELASRSPSG 510 520 530 540 550 560 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 570 580 590 600 610 620 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 630 640 650 660 670 680 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|739 SEDKIWTSYTEYVFCRE 690 >>gi|114650126|ref|XP_001137708.1| PREDICTED: similar to (273 aa) initn: 1262 init1: 1262 opt: 1499 Z-score: 1543.0 bits: 293.0 E(): 3.1e-77 Smith-Waterman score: 1499; 98.678% identity (98.678% similar) in 227 aa overlap (1-227:49-273) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|114 RGPTHLGSQGKLPGGGGGSVGCSPRGKSKRLVLPDYFPERSRLQREAEYFELPELVRRLG 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG ::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::: gi|114 APQQPGPGPPP--SRRGVHKEGSLGDELLPLGYAEPEQQEGASAGAPSPTLELASRSPSG 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 200 210 220 230 240 250 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|114 SEDKIWTSYTEYVFCRE 260 270 >>gi|109120959|ref|XP_001085454.1| PREDICTED: similar to (325 aa) initn: 1262 init1: 1262 opt: 1499 Z-score: 1542.0 bits: 293.1 E(): 3.5e-77 Smith-Waterman score: 1499; 98.678% identity (98.678% similar) in 227 aa overlap (1-227:101-325) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|109 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG ::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::: gi|109 APQQPGPGPPP--SRRGVHKEGSLGDELLPLGYAEPEQQEGASAGAPSPTLELASRSPSG 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 190 200 210 220 230 240 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 250 260 270 280 290 300 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|109 SEDKIWTSYTEYVFCRE 310 320 >>gi|50401124|sp|Q96CX2.1|KCD12_HUMAN RecName: Full=BTB/ (325 aa) initn: 1258 init1: 1258 opt: 1495 Z-score: 1537.9 bits: 292.3 E(): 5.9e-77 Smith-Waterman score: 1495; 98.238% identity (98.678% similar) in 227 aa overlap (1-227:101-325) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|504 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG ::::::::::: ::::::::::::::::::::.::: :::::::::::::::::::::: gi|504 APQQPGPGPPP--SRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLELASRSPSG 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 190 200 210 220 230 240 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 250 260 270 280 290 300 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|504 SEDKIWTSYTEYVFCRE 310 320 >>gi|193785879|dbj|BAG54666.1| unnamed protein product [ (325 aa) initn: 1258 init1: 1258 opt: 1495 Z-score: 1537.9 bits: 292.3 E(): 5.9e-77 Smith-Waterman score: 1495; 98.238% identity (98.678% similar) in 227 aa overlap (1-227:101-325) 10 20 30 mKIAA1 LVLPDYFPERSRLQREAEYFELPELVRRLG :::::::::::::::::::::::::::::: gi|193 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA1 APQQPGPGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSG ::::::::::: ::::::::::::::::::::.::: :::::::::::::::::::::: gi|193 APQQPGPGPPP--SRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLELASRSPSG 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 GAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEV 190 200 210 220 230 240 160 170 180 190 200 210 mKIAA1 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 FGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQ 250 260 270 280 290 300 220 mKIAA1 SEDKIWTSYTEYVFCRE ::::::::::::::::: gi|193 SEDKIWTSYTEYVFCRE 310 320 227 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 20:08:21 2009 done: Sun Mar 15 20:13:23 2009 Total Scan time: 714.180 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]