FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1686.ptfa, 1205 aa vs ./tmplib.26680 library 1767812 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.7400+/-0.0074; mu= 0.5744+/- 0.490 mean_var=256.4519+/-62.404, 0's: 0 Z-trim: 8 B-trim: 104 in 1/35 Lambda= 0.0801 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0969 ( 1106 res) mic02056 (1106) 533 76 5e-14 mKIAA0902 ( 1058 res) mbg09814 (1058) 265 45 0.0001 mKIAA0403 ( 423 res) mbp11090 ( 423) 203 37 0.0076 >>mKIAA0969 ( 1106 res) mic02056 (1106 aa) initn: 1296 init1: 389 opt: 533 Z-score: 344.2 bits: 75.6 E(): 5e-14 Smith-Waterman score: 1382; 30.079% identity (37.862% ungapped) in 1260 aa overlap (14-1194:7-1086) 10 20 30 40 50 60 mKIAA1 EAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNDQTVATMTSEDKKERPISMIN ::::. : .:::::: ..: : .. ... :... .: .. . mKIAA0 GSALSCHNERRNTFRHPVTGQIPEENKKFDLKTSAL-DMSNKTGGKRSATINS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTG . .:.::.:. : : : :..:.:.:. ::::..:.::::::::.. :::::: :.: mKIAA0 DIANHNMVSE--VPPERPNIRATRTSRKAIAFGKRAHSMKRNPNAPVTKAGWLYKQASSG 60 70 80 90 100 110 130 140 150 160 170 mKIAA1 MKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHINRKYAFK------ .: :.:::::: : :::::.:::.:.::::: : ::..: . :.:.::..:: mKIAA0 VKQWNKRWFVLVDRCLFYYKDEKQESILGSIPLLSFRVAAVQPSDNISRKHTFKVTVHWV 120 130 140 150 160 170 180 190 200 210 220 mKIAA1 --------------AAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRV : : ..:::.: ... .:.: :..:: .:: :: :... : mKIAA0 DEAGASSTHCLSPQAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQIPPAQK-----SV 180 190 200 210 220 230 240 250 260 270 mKIAA1 DKITTDSASTKETNNIPNHRVLIRPEVQNHQKNKEISKIE---EKRALE-AERYGFQKDG . . : ...::: . .: .: : . .: . . :. : ::: . . mKIAA0 PQPVRHSLEKPDSENIPPSKHHQQPPHNNLTKLEPEAKTRGEGDGRGCEKAERRPERPEV 230 240 250 260 270 280 280 290 300 310 320 mKIAA1 QDRPLTKINSVKLNSLL-----SEYESGPDCPPQNVHYRPINVN----SSDGKAVNVSLA . . :.: :.. . : : .:: : . : : . : :: .. .... mKIAA0 KKETLVKANGLPSGPETASEPGSPYPDGPRVPGGGEH--PAQPNGWQYSSPSRPGSTAFP 290 300 310 320 330 340 330 340 350 360 370 380 mKIAA1 --DVRGGSHPNAGPLATEADRVIQRTNSMQQLEQWIKVQKGRGLEEEPRGVISYQTLPRN : .:.. . : :. :.. :: .::.::.::.....: :. :. . .:: mKIAA0 PHDGDSGGQRRSFPPRTDPDKIAQRKSSMNQLQQWVNLRRGVPPPEDLRSPSRFYPMPRR 350 360 370 380 390 400 390 400 410 420 430 440 mKIAA1 MPSHRAQILARCPEGYRTLPRNSKTRPESICSVTSSGHEKTGP--GAEEKRRSMRDD--T .:.. .. :. :. : . .::.::::. . ... .: . :.::.:.:. mKIAA0 VPDYYNPYSSQYPDDYQYYPPG--VRPDSICSMPA--YDRISPPWALEDKRHSFRNGGGP 410 420 430 440 450 450 460 470 480 mKIAA1 MWQLYEWQQRQFYHKQST---LP---RHGCL-----SSPKAMVQVSDQTM-HSIPTSPSH .::.::.. : .:. .: :. . .. .. ..: : ::.: :::. mKIAA0 TYQLHEWKESTSYGRQDGTVWIPSPSRQPVFYDELDAASGSLRRLSLQPRSHSVPRSPSQ 460 470 480 490 500 510 490 500 510 520 530 540 mKIAA1 GSAAAYQGFSPQRTYRSEVTSPIQRGDVTIDRRHRPHHPKHVYVADRRSMPAGLTLQAVS :: .: : : : : :: : .:: : . . .: :: ::. .. mKIAA0 GS------YSRARIY-SPVRSPSAR----FDRL--PPRSEDIY-AD----PAAYVM---- 520 530 540 550 550 560 570 580 590 600 mKIAA1 PQSLQGRTPEELTLLLIKLRRQQAELSSVREHTLAQLMQLKLEAHSPKNEILSHHLQRNT ::. . ::: mKIAA0 -------------------RRSIS---------------------SPKV----------- 560 610 620 630 640 650 660 mKIAA1 IYLDHQMKENEPIITMVHTMIENSALRPQLYQQFLRQKNKISLYCLSQDECRGTLYKYRP : :... : :. .. mKIAA0 -----------PAY-------------PEVF--------------------RDGLHTFKL 570 580 670 680 690 700 710 720 mKIAA1 EEAGIDAKLSRLCEQDKVVRALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTV .: : :..::::.:::: :. .:::. :: .::.::... ::.:: ...:: . . mKIAA0 NEQDTDKLLGKLCEQNKVVREQERLVQQLRAEKESLESALMGTHQELEMFGSQPAYPEKL 590 600 610 620 630 640 730 740 750 760 770 780 mKIAA1 VLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRDQMQGQLDRLGEVQSES . ....::: :.. :::.::. : . :..:: .:.. .:.. ::. ..:.: mKIAA0 LHKKESLQNQLINIRVELSQATTALTNSTVVYENLESEVSALHDELWEQLNL--DIQNE- 650 660 670 680 690 790 800 810 820 830 840 mKIAA1 AGIQRAQIQKELWRIQDVMEGLSKHKQQRGS-SETGLAGSKPFSSVKYKSEEEEVVPPRP . :::::.:::::::::: :.. .::. . .: : :. :.:. : mKIAA0 --VLNRQIQKEIWRIQDVMEGLRKNNPSRGTDTAKHRGGLGP--SATYSSNS-----PAS 700 710 720 730 740 750 850 860 870 880 890 900 mKIAA1 PLPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEDKKIHQVQGYPRNGSHCGPDYRL :: : ..: :. : :.. :.: : ... :..: :. mKIAA0 PLS-SASLTS--PLSP------FSMVSGSQGSPTKPGSSE-------PKTG------YET 760 770 780 910 920 930 940 950 960 mKIAA1 YKSEPELTTV--AEVDESNGEEKSEPVSETEAPVVKGSHFPVG-VPLRTKSPTPESSTIA :..: :. . : . ..: .: .: . : :: :: :::::. : : mKIAA0 SKKDPSQTSPLGTPRDINLVPTRQEVEAEKQAALNK-----VGIVPPRTKSPAEEELT-P 790 800 810 820 830 840 970 980 990 1000 1010 1020 mKIAA1 SYVTLRKTKKM---VELRTERPRSAVEQLCLAESARPRMTVEEQLERIRRHQQACLREKK : :. : :. . . : :::.::: .. .. .:.::::..:.::::.. ..::. mKIAA0 SAVVRRTTNGLTNGLSSRQERPKSAV----FSGEGKVKMSVEEQMDRMRRHQSGSMKEKR 850 860 870 880 890 1030 1040 1050 1060 1070 mKIAA1 KGLSVLGASDPSDVRDSPLRLTQTLRRDDNVKELDTVHRENDVKPD------YETPAAQC ..:. : :: . : ...:: ...:.: . : .. . :::: . mKIAA0 RSLQ-LPASPAPEPSTRPAY--KVVRRHRSIHEVDISNLEAALRAEEPGGQAYETPREEI 900 910 920 930 940 950 1080 1090 1100 1110 1120 mKIAA1 AHLE--DAEPQ--NADIGRKLKRSEMLYTPE------PNG-MASEEVTEKERQKEQVHAD :.:. . ::: ..::...:. . . :: :. .. ::. ::... :.... mKIAA0 ARLRKMELEPQHYDVDISKELSTPDKVLIPERYIDLEPDTPLSPEELKEKQKKVERIKTL 960 970 980 990 1000 1010 1130 1140 1150 1160 1170 1180 mKIAA1 -GSCSPQEETAMTEHQMEGPPEEAES-LHEEEETLA-SCEPAPEIPRENQT-TVRSLSPS .. : :. . . : . :...:: :.:.:. . :: : : :... .:. .:: mKIAA0 IAKSSMQNVVPIGEGDSVDVPQDSESQLQEQEKRIEISCALATEASRRGRMLSVQCATPS 1020 1030 1040 1050 1060 1070 1190 1200 mKIAA1 PDSSTAADPPTPPQLREGSHFMCV : .: :. :::: mKIAA0 PPTSPAS--PTPPVNPLSSDRPRGADSSHTMRV 1080 1090 1100 >>mKIAA0902 ( 1058 res) mbg09814 (1058 aa) initn: 236 init1: 126 opt: 265 Z-score: 177.1 bits: 44.6 E(): 0.0001 Smith-Waterman score: 265; 33.918% identity (37.179% ungapped) in 171 aa overlap (86-245:573-739) 60 70 80 90 100 110 mKIAA1 ISMINEASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRG---- ::: .: : :.. :: . . :: mKIAA0 MDALRQDIMGTPVPETTLYHTFQQSSLQHKSKK-KNKGAISGKSKRRISCKDLGRGDCEG 550 560 570 580 590 600 120 130 140 150 160 mKIAA1 WLYKQ-DSTGM--KLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHIN ::.:. :. .. . ::: ::::.: :..: .:..: : : :: :.: . . mKIAA0 WLWKKKDAKSYFSQKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKIDRAS---ECR 610 620 630 640 650 170 180 190 200 210 220 mKIAA1 RKYAFKAAHPNMRTYYFCTDTGKEMELWMK--AMLDAALVQTEPVKR-ITFNFRVDKITT .:::::: ::.....:: .. .:. :.. :: :. .. : .:. . . :: . mKIAA0 KKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINMLTAGYAERERIKQEQDYWSESDKEEA 660 670 680 690 700 710 230 240 250 260 270 280 mKIAA1 DSAST-KETNNIPNHRVLIRPEVQNHQKNKEISKIEEKRALEAERYGFQKDGQDRPLTKI :. :: :. . : . . :: mKIAA0 DTPSTPKQDSPPPPYDTYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGS 720 730 740 750 760 770 >>mKIAA0403 ( 423 res) mbp11090 (423 aa) initn: 162 init1: 102 opt: 203 Z-score: 143.4 bits: 37.1 E(): 0.0076 Smith-Waterman score: 203; 30.159% identity (32.479% ungapped) in 126 aa overlap (91-213:13-132) 70 80 90 100 110 120 mKIAA1 EASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTG :...: : : .: .:::::. : mKIAA0 HSPVHATLAGFFNMSRRRISCKDLGHADC--QGWLYKKKEKG 10 20 30 40 130 140 150 160 170 mKIAA1 MKL---WKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHINRKYAFKAAH : ::: : ::. :..: .. : : . : .: . . . ..: ::: : mKIAA0 TFLSNKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLSDFTVERAS---ECKKKNAFKINH 50 60 70 80 90 180 190 200 210 220 230 mKIAA1 PNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITTDSASTKETNNIP :.....:: ... .::..:.. : :... : . . mKIAA0 PQIKAFYFAAENLQEMNVWLNK-LGFAVTHQESITKDEECYSESEQEDPEVAVEAPPPPY 100 110 120 130 140 150 240 250 260 270 280 290 mKIAA1 NHRVLIRPEVQNHQKNKEISKIEEKRALEAERYGFQKDGQDRPLTKINSVKLNSLLSEYE mKIAA0 ASTTSSPVVRVDAAQWASSSSPKRRETSCSFSSLENTVKAPSQFSSSGSKERQSWHNIVN 160 170 180 190 200 210 1205 residues in 1 query sequences 1767812 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:50:58 2006 done: Mon Mar 27 10:50:59 2006 Scan time: 1.110 Display time: 0.190 Function used was FASTA [version 3.4t11 Apr 17, 2002]