FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1288.ptfa, 425 aa vs ./tmplib.26680 library 1768592 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.6994+/-0.00656; mu= 2.1430+/- 0.432 mean_var=373.5170+/-89.140, 0's: 0 Z-trim: 18 B-trim: 24 in 1/35 Lambda= 0.0664 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0774 ( 1252 res) mbh01103 (1252) 763 87 5.5e-18 mKIAA0531 ( 987 res) mbg05983 ( 987) 241 37 0.0054 mKIAA0378 ( 632 res) mbg02680 ( 632) 234 36 0.0068 >>mKIAA0774 ( 1252 res) mbh01103 (1252 aa) initn: 740 init1: 404 opt: 763 Z-score: 415.3 bits: 87.4 E(): 5.5e-18 Smith-Waterman score: 763; 36.559% identity (38.418% ungapped) in 372 aa overlap (61-425:892-1252) 40 50 60 70 80 90 mKIAA1 HVRLTAKGLLRNLRLPSGLRKNTVIFHTVEKGRQKNPRSLCIQTQTAPDVLSSERTLELA : : . ::. . ::. . : .:: mKIAA0 QKDPEAKKPAVSSPKRTASAATKPHSPGYPKQRTSAPRN---EFPPKPDLQAREAERQLA 870 880 890 900 910 100 110 120 130 140 mKIAA1 QY-KTKCESQSGFILHLRQLLSRGNTKFEALTVVIQHLLSEREEALKQHKTLSQELVSLR : . .:: :. . :. :... :.::.: .:.... :.:: ..: :: ::...: mKIAA0 QRLRDRCEWQARQLGLARRELKKAIQGFDALAVSTKHFFGKSERALAKEKELSIELANIR 920 930 940 950 960 970 150 160 170 180 190 200 mKIAA1 GELVAASSACEKLEKARADLQTAYQEFVQKLNQQHQTDRTELENRLKDLYTAECEKLQSI :.. .. ::::.: . :. ..: ...:. :.:.. ::..::.. . :: .::. mKIAA0 DEVAFNTAKCEKLQKEKETLERRFEEELRRLGWQQQAEVQELQERLQQQFQAESARLQAE 980 990 1000 1010 1020 1030 210 220 230 240 250 260 mKIAA1 YIEEAEKYKTQLQEQLPEIKKSHEMEKKSLEDLLNEKQESLEKQINDLKSENDALNERLK . .. ... : :::. ..::.::: ::. ... . .:. :.. : ....: .: . mKIAA0 HQDQLLRMRCQHQEQM----STHEFEKKELEENFEKLRLTLQDQVDTLTFQSQSLRDRAR 1040 1050 1060 1070 1080 1090 270 280 290 300 310 320 mKIAA1 SEEQ--KQLSREKANSKNPQVMYLEQELESLKAVLEIKNEKLHQQDMKLMKMEKLVDNNT :. .. ..:. . ..::....::: :::.::...: :. :....::::..: mKIAA0 RFEEALRKTTEEQLEIALAPYQHLEEDMQSLKQVLEMKNQQIHLQEKKIIELEKLVEKNI 1100 1110 1120 1130 1140 1150 330 340 350 360 370 380 mKIAA1 ALVDKLKRFQQENEELKARMDKHMAISRQLSTEQAALQESLEKESKVNKRLSMENEELLW : .... .::.::.::::.:.. ...:::: :.: ::: .:::.. .:::: :::::: mKIAA0 ILEERIQVLQQQNEDLKARIDQNTVVTRQLSEENANLQEYVEKETQEKKRLSRTNEELLW 1160 1170 1180 1190 1200 1210 390 400 410 420 mKIAA1 KLHNGDLCSP-KRSPTSSAIPFQSPRNSGSFSSP---SISPR ::..:: :: : :::: : .:: ::: : .:: mKIAA0 KLQTGDPTSPIKLSPTS---PVYRGSSSGP-SSPARVSTTPR 1220 1230 1240 1250 >>mKIAA0531 ( 987 res) mbg05983 (987 aa) initn: 181 init1: 110 opt: 241 Z-score: 146.1 bits: 37.3 E(): 0.0054 Smith-Waterman score: 241; 23.823% identity (25.826% ungapped) in 361 aa overlap (80-421:631-982) 50 60 70 80 90 100 mKIAA1 RKNTVIFHTVEKGRQKNPRSLCIQTQTAPDVLSSERTLELAQYKT--KCESQSGFILHLR ... . :: ::. . : ... . . mKIAA0 KTLADVNGVIEEEFTMARLYISKMKSEVKSLVNRSKQLESAQMDSNRKMNASERELAACQ 610 620 630 640 650 660 110 120 130 140 150 160 mKIAA1 QLLSRGNTKFEALTVVIQHLLSEREEALKQHKTLSQELVSLRG-ELVAASSACEKLEKAR :.:. ..:...:: .:.. ..:.. ... .::.::..::. : . : .: .. mKIAA0 LLISQHEAKIKSLTDYMQNMEQKRRQLEESQDSLSEELAKLRAQEKMHEVSFQDKEKEHL 670 680 690 700 710 720 170 180 190 200 210 220 mKIAA1 ADLQTAYQEFVQKLNQQHQTDRTELENRLKDLYTAECEKLQSIYIEEAEKYKTQLQEQLP . :: : .: . :.:: .. : ...:. : : :. : : :.: . . .:: : mKIAA0 TRLQDA-EEVKKALEQQMESHREAHQKQLSRLRD-EIEEKQRI-IDEIRDLNQKLQ--LE 730 740 750 760 770 230 240 250 260 270 280 mKIAA1 EIKKSHEMEKKSLEDLLNEKQESLEKQINDLKSENDALNERLKSEEQKQLSREKANSKNP . . : ...: ..:: .:.. .::: . :... . : ::. :. .::: . .: mKIAA0 QERLSSDYNKLKIED--QEREVKLEKLLL-LNDKREQAREDLKGLEET-VSRELQTLHNL 780 790 800 810 820 830 290 300 310 320 330 340 mKIAA1 QVMYLEQELESLKAVLEIKNEKLHQQDMKLMKMEKLVDNNTALVDKLKRFQQENEELKA- . ..... .: .:. .. . . .:. : .: :. :.. ..: .:. mKIAA0 RKLFVQDLTTRVKKSVELDSDDGGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCE 840 850 860 870 880 890 350 360 370 380 390 mKIAA1 --RMDKHM-AISRQLSTEQAALQESLEKESKVNKRLSME---------NEELLWKLHNGD ...:.. : ...... ..::.:. :. . :: ..: ... . :... mKIAA0 LPKLEKRLRATAERVKALESALKEAKENAMRDRKRYQQEVDRIKEAVRAKNMARRAHSAQ 900 910 920 930 940 950 400 410 420 mKIAA1 LCSPKRS---PTSSAIPFQSPRNSGSFSSPSISPR . .: : :.:: .. :..:. :: : mKIAA0 IAKPIRPGHYPASSPTAVHAVRGGGGGSSNSTHYQK 960 970 980 >>mKIAA0378 ( 632 res) mbg02680 (632 aa) initn: 79 init1: 55 opt: 234 Z-score: 144.3 bits: 36.3 E(): 0.0068 Smith-Waterman score: 234; 24.632% identity (25.969% ungapped) in 272 aa overlap (115-380:165-428) 90 100 110 120 130 140 mKIAA1 RTLELAQYKTKCESQSGFILHLRQLLSRGNTKFEALTVVIQHLLSEREEALKQHKTLSQE :. .:: . ... : .. :: . :..: mKIAA0 LSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEE 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA1 LVSLRGELVAASSACEKLEKARADLQTAYQEFVQKLNQQHQTDRTELENRLKDLYTAECE .: ::. .. : :. :: ... ..: .. . . :.:..:.:.: : . mKIAA0 KGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDK-QLTNLKDRVKSLQTDSSN 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA1 KLQSIY-IEEAEKYKTQLQEQLPEIKKSHEMEKKSLEDLLNEKQESLEKQINDLKSENDA .. .::: . : .. :.: : .. . :. ::.. ::..:. .::: . .: mKIAA0 TDTALATLEEALSEKERIIERLKEQRERDDRER--LEEI-----ESFRKENKDLKEKVNA 260 270 280 290 300 270 280 290 300 310 320 mKIAA1 LNERLKSEEQKQLS-REKANSKNPQVMYLEQELESLKAVLEIKNEKLHQQDMKLMKMEKL :. .: .:.. .. .:.:.: . ...:.::. ..: :.:. .. . .: : ... mKIAA0 LQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECNKLEAQLKKAHNI 310 320 330 340 350 360 330 340 350 360 370 mKIAA1 VDN---NTALVDKLKRFQQENEELKARMDKHMA-ISRQLSTEQAALQESLEKESKVNKRL :. : ..:.::....: . . : .: ..: : . . .:. .:..:. . mKIAA0 EDDSRMNPEFADRLKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELE 370 380 390 400 410 420 380 390 400 410 420 mKIAA1 SMENEELLWKLHNGDLCSPKRSPTSSAIPFQSPRNSGSFSSPSISPR :. mKIAA0 SLTLRHMKDQNKKVANLKYNQQLEKKKNAQLLEEVRRREDSMVDNSQHLQIEELMNALEK 430 440 450 460 470 480 425 residues in 1 query sequences 1768592 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:40:00 2006 done: Mon Mar 27 10:40:01 2006 Scan time: 0.660 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]