# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg20018.fasta.nr -Q ../query/mFLJ00211.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00211, 305 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920483 sequences Expectation_n fit: rho(ln(x))= 5.3816+/-0.000187; mu= 9.1163+/- 0.011 mean_var=79.0340+/-15.475, 0's: 40 Z-trim: 48 B-trim: 1184 in 1/64 Lambda= 0.144267 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847470|dbj|BAD21407.1| mFLJ00211 protein [Mus ( 305) 2041 433.8 1.9e-119 gi|46396506|sp|Q9CPR8.1|MAGG1_MOUSE RecName: Full= ( 279) 1856 395.3 6.8e-108 gi|12857872|dbj|BAB31133.1| unnamed protein produc ( 279) 1848 393.6 2.2e-107 gi|68534276|gb|AAH98730.1| Ndnl2 protein [Rattus n ( 305) 1848 393.7 2.3e-107 gi|109458873|ref|XP_219708.3| PREDICTED: similar t ( 370) 1837 391.4 1.3e-106 gi|149057076|gb|EDM08399.1| rCG24814 [Rattus norve ( 278) 1748 372.8 4e-101 gi|73951170|ref|XP_545818.2| PREDICTED: similar to ( 368) 1630 348.4 1.2e-93 gi|114214800|gb|AAI23382.1| Necdin-like 2 [Bos tau ( 285) 1507 322.7 5.1e-86 gi|109080442|ref|XP_001109764.1| PREDICTED: simila ( 299) 1478 316.6 3.5e-84 gi|114656068|ref|XP_001163393.1| PREDICTED: hypoth ( 304) 1471 315.2 9.6e-84 gi|46396494|sp|Q96MG7.1|MAGG1_HUMAN RecName: Full= ( 304) 1466 314.2 2e-83 gi|18676624|dbj|BAB84964.1| FLJ00211 protein [Homo ( 213) 1273 273.9 1.9e-71 gi|149062082|gb|EDM12505.1| rCG47976 [Rattus norve ( 285) 1272 273.8 2.7e-71 gi|12659144|gb|AAK01208.1| mage-g2 [Mus musculus] ( 294) 1250 269.2 6.6e-70 gi|12839098|dbj|BAB24434.1| unnamed protein produc ( 294) 1235 266.1 5.7e-69 gi|75775092|gb|AAI04538.1| MAGEF1 protein [Bos tau ( 306) 931 202.8 6.6e-50 gi|154425727|gb|AAI51555.1| MAGEF1 protein [Bos ta ( 307) 931 202.8 6.6e-50 gi|29826296|ref|NP_071432.2| melanoma antigen fami ( 307) 910 198.4 1.4e-48 gi|109042386|ref|XP_001097423.1| PREDICTED: melano ( 308) 909 198.2 1.6e-48 gi|194040992|ref|XP_001924432.1| PREDICTED: simila ( 315) 909 198.2 1.6e-48 gi|119598641|gb|EAW78235.1| melanoma antigen famil ( 307) 906 197.6 2.4e-48 gi|17368966|sp|Q9HAY2.1|MAGF1_HUMAN RecName: Full= ( 308) 906 197.6 2.4e-48 gi|114590831|ref|XP_516919.2| PREDICTED: melanoma ( 310) 905 197.4 2.8e-48 gi|74003490|ref|XP_545233.2| PREDICTED: similar to ( 320) 900 196.4 6e-48 gi|11596406|gb|AAG38606.1|AF320910_1 MAGE-F1 [Homo ( 284) 887 193.6 3.5e-47 gi|126340369|ref|XP_001365580.1| PREDICTED: simila ( 343) 859 187.9 2.3e-45 gi|126342894|ref|XP_001373678.1| PREDICTED: simila ( 380) 849 185.8 1.1e-44 gi|161611791|gb|AAI55976.1| Magee1 protein [Xenopu ( 235) 805 176.5 4.2e-42 gi|47212804|emb|CAF96179.1| unnamed protein produc ( 265) 767 168.6 1.1e-39 gi|194044842|ref|XP_001924553.1| PREDICTED: simila (1510) 768 169.4 3.7e-39 gi|197127471|gb|ACH43969.1| putative necdin-like 2 ( 239) 752 165.5 8.9e-39 gi|194227760|ref|XP_001493854.2| PREDICTED: simila ( 448) 753 165.9 1.3e-38 gi|194206370|ref|XP_001493076.2| PREDICTED: simila (1245) 756 166.8 1.8e-38 gi|194227784|ref|XP_001488746.2| PREDICTED: simila ( 389) 744 164.0 4.1e-38 gi|29792032|gb|AAH50588.1| Melanoma antigen family ( 957) 748 165.1 4.7e-38 gi|50428953|sp|Q9HCI5.2|MAGE1_HUMAN RecName: Full= ( 957) 748 165.1 4.7e-38 gi|194227758|ref|XP_001493831.2| PREDICTED: simila ( 353) 740 163.1 6.8e-38 gi|115499481|gb|ABI98817.1| MAGE protein [Gallus g ( 246) 735 161.9 1.1e-37 gi|33440006|gb|AAO46100.1| mage [Danio rerio] ( 260) 734 161.8 1.3e-37 gi|109131292|ref|XP_001098743.1| PREDICTED: simila ( 945) 740 163.4 1.5e-37 gi|61886229|ref|XP_610684.1| PREDICTED: similar to ( 340) 732 161.4 2.1e-37 gi|194044844|ref|XP_001924609.1| PREDICTED: simila ( 433) 733 161.7 2.2e-37 gi|57209936|emb|CAI42345.1| melanoma antigen famil ( 521) 731 161.4 3.4e-37 gi|114689227|ref|XP_001143922.1| PREDICTED: melano ( 949) 734 162.2 3.5e-37 gi|194377808|dbj|BAG63267.1| unnamed protein produ ( 520) 729 160.9 4.5e-37 gi|194227780|ref|XP_001488596.2| PREDICTED: simila ( 394) 727 160.4 4.8e-37 gi|149755821|ref|XP_001488239.1| PREDICTED: simila ( 342) 726 160.2 5e-37 gi|50401145|sp|Q9BE18|MAGE1_MACFA Melanoma-associa ( 957) 731 161.5 5.4e-37 gi|194227750|ref|XP_001493441.2| PREDICTED: simila ( 345) 725 160.0 5.8e-37 gi|56270528|gb|AAH86747.1| Ndnl2 protein [Danio re ( 260) 723 159.5 6.2e-37 >>gi|47847470|dbj|BAD21407.1| mFLJ00211 protein [Mus mus (305 aa) initn: 2041 init1: 2041 opt: 2041 Z-score: 2300.9 bits: 433.8 E(): 1.9e-119 Smith-Waterman score: 2041; 100.000% identity (100.000% similar) in 305 aa overlap (1-305:1-305) 10 20 30 40 50 60 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA 250 260 270 280 290 300 mFLJ00 PATSS ::::: gi|478 PATSS >>gi|46396506|sp|Q9CPR8.1|MAGG1_MOUSE RecName: Full=Mela (279 aa) initn: 1856 init1: 1856 opt: 1856 Z-score: 2093.4 bits: 395.3 E(): 6.8e-108 Smith-Waterman score: 1856; 100.000% identity (100.000% similar) in 279 aa overlap (27-305:1-279) 10 20 30 40 50 60 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA :::::::::::::::::::::::::::::::::: gi|463 MLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA 10 20 30 70 80 90 100 110 120 mFLJ00 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA 220 230 240 250 260 270 mFLJ00 PATSS ::::: gi|463 PATSS >>gi|12857872|dbj|BAB31133.1| unnamed protein product [M (279 aa) initn: 1848 init1: 1848 opt: 1848 Z-score: 2084.4 bits: 393.6 E(): 2.2e-107 Smith-Waterman score: 1848; 99.642% identity (100.000% similar) in 279 aa overlap (27-305:1-279) 10 20 30 40 50 60 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA :::::::::::::::::::::::::::::::::: gi|128 MLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA 10 20 30 70 80 90 100 110 120 mFLJ00 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 AAGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA 220 230 240 250 260 270 mFLJ00 PATSS ::::: gi|128 PATSS >>gi|68534276|gb|AAH98730.1| Ndnl2 protein [Rattus norve (305 aa) initn: 1839 init1: 1839 opt: 1848 Z-score: 2083.8 bits: 393.7 E(): 2.3e-107 Smith-Waterman score: 1848; 93.919% identity (96.959% similar) in 296 aa overlap (10-305:11-305) 10 20 30 40 50 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSR :::::: ::::::::::::::::::::::.: ::::::.:::.::::: gi|685 LELFRRACRRFWRLLLLNLACSPPTGDMLQKPRGRGRPSTQGDRERDWGGSGEEAPSTSR 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 AAGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDY .:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GAGGTSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDY 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 RDVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLL :::::::::::::::::::::::::::::::.::::: ::::: :::.::::::: :::: gi|685 RDVYPNLLKLAAERLQYVFGYKLVELEPKSHTYILINALEPVEEDAEVRGDQGTPTSGLL 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 MIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 MIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIP 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 HTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATAS ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: :: gi|685 HTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEESRARPA-AS 250 260 270 280 290 300 mFLJ00 APATSS . :::: gi|685 GLATSS 300 >>gi|109458873|ref|XP_219708.3| PREDICTED: similar to ma (370 aa) initn: 1834 init1: 1834 opt: 1837 Z-score: 2070.3 bits: 391.4 E(): 1.3e-106 Smith-Waterman score: 1837; 93.515% identity (96.928% similar) in 293 aa overlap (10-302:62-353) 10 20 30 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPST :::::: ::::::::::::::::::::: gi|109 LRLPDAARQRRDVTRAPQLLLELFRRACRRFWRLLLLNLACSPPTGDMLQKPRGRGRPST 40 50 60 70 80 90 40 50 60 70 80 90 mFLJ00 QADPERDWGGAGEEGPSTSRAAGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIK :.: ::::::.:::.:::::.:::.::::::::::::::::::::::::::::::::::: gi|109 QGDRERDWGGSGEEAPSTSRGAGGTSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIK 100 110 120 130 140 150 100 110 120 130 140 150 mFLJ00 DQKKIPIKRTDILKHVVGDYRDVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLE :::::::::::::::::::::::::::::::::::::::::::::::::::.::::: :: gi|109 DQKKIPIKRTDILKHVVGDYRDVYPNLLKLAAERLQYVFGYKLVELEPKSHTYILINALE 160 170 180 190 200 210 160 170 180 190 200 210 mFLJ00 PVEADAEMRGDQGTPISGLLMIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDP ::: :::.::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|109 PVEEDAEVRGDQGTPTSGLLMIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDP 220 230 240 250 260 270 220 230 240 250 260 270 mFLJ00 KKLITEDFVRQRYLEYRRIPHTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKLITEDFVRQRYLEYRRIPHTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWP 280 290 300 310 320 330 280 290 300 mFLJ00 TQYCEALADEESRARPATASAPATSS .:::::::::::::::: :. :. gi|109 AQYCEALADEESRARPA-ANDPSLCQVDKNPASVDLETWY 340 350 360 370 >>gi|149057076|gb|EDM08399.1| rCG24814 [Rattus norvegicu (278 aa) initn: 1739 init1: 1739 opt: 1748 Z-score: 1971.9 bits: 372.8 E(): 4e-101 Smith-Waterman score: 1748; 94.624% identity (97.849% similar) in 279 aa overlap (27-305:1-278) 10 20 30 40 50 60 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA ::::::::::::::.: ::::::.:::.:::::. gi|149 MLQKPRGRGRPSTQGDRERDWGGSGEEAPSTSRG 10 20 30 70 80 90 100 110 120 mFLJ00 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AGGTSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM ::::::::::::::::::::::::::::::.::::: ::::: :::.::::::: ::::: gi|149 DVYPNLLKLAAERLQYVFGYKLVELEPKSHTYILINALEPVEEDAEVRGDQGTPTSGLLM 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATASA :::::::::::::::::::::::::::::::::::::::.:::::::::::::::: ::. gi|149 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEESRARPA-ASG 220 230 240 250 260 270 mFLJ00 PATSS :::: gi|149 LATSS >>gi|73951170|ref|XP_545818.2| PREDICTED: similar to nec (368 aa) initn: 1633 init1: 1393 opt: 1630 Z-score: 1837.5 bits: 348.4 E(): 1.2e-93 Smith-Waterman score: 1630; 80.464% identity (92.715% similar) in 302 aa overlap (12-305:70-368) 10 20 30 40 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQA ::.::..: : .::::::::.:::::.:: gi|739 CLLVVVILGTVTGSVLLFPLQIMLLELLLPRLVLPVTA--PAAGDMLQKPRSRGRPSSQA 40 50 60 70 80 90 50 60 70 80 90 mFLJ00 DPERDWG-GAGEEGPSTSRAAGGS-------SQGSRASLSAPTVGPRTQKQLELKVAELV : ..::: ::.::.:::::.:::: ::..: . ..: ::::.:.:::::::::: gi|739 DRDKDWGRGAAEEAPSTSRGAGGSQEARGAASQSARRAGASPEVGPRSQQQLELKVAELV 100 110 120 130 140 150 100 110 120 130 140 150 mFLJ00 QFLLIKDQKKIPIKRTDILKHVVGDYRDVYPNLLKLAAERLQYVFGYKLVELEPKSHSYI ::::::::::::::::::::::.:::.:..:.::.::::::.:::::.::::::::..:: gi|739 QFLLIKDQKKIPIKRTDILKHVIGDYKDIFPDLLRLAAERLEYVFGYRLVELEPKSNTYI 160 170 180 190 200 210 160 170 180 190 200 210 mFLJ00 LINMLEPVEADAEMRGDQGTPISGLLMIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKH ::: ::::: :::.::::::: .::::::::::::::::: ::::::::::::::::::: gi|739 LINTLEPVEEDAEVRGDQGTPTTGLLMIVLGLIFMKGNTIKETEVWDFLRRLGVYPTKKH 220 230 240 250 260 270 220 230 240 250 260 270 mFLJ00 LIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQ :.::::::::::.:::::::::::::::::::::.::::::::::::::::::::::::: gi|739 LVFGDPKKLITEEFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQ 280 290 300 310 320 330 280 290 300 mFLJ00 DPKDWPTQYCEALADEESRARPATASAPATSS ::::::.::::::::::.:::: :.. :: :: gi|739 DPKDWPAQYCEALADEEARARPETGG-PAPSS 340 350 360 >>gi|114214800|gb|AAI23382.1| Necdin-like 2 [Bos taurus] (285 aa) initn: 1455 init1: 1332 opt: 1507 Z-score: 1700.7 bits: 322.7 E(): 5.1e-86 Smith-Waterman score: 1507; 79.928% identity (93.190% similar) in 279 aa overlap (27-304:1-276) 10 20 30 40 50 60 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDWGGAGEEGPSTSRA : :::..:::::.:. ::. ::.:::.:::::. gi|114 MSQKPKSRGRPSSQV--EREPGGGGEEAPSTSRG 10 20 30 70 80 90 100 110 120 mFLJ00 AGGSSQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIKDQKKIPIKRTDILKHVVGDYR ::... ::. : :. :::.::::::::::::::::::::.::::.:::::.::::::. gi|114 PGGAASQRRAQAS-PAPGPRSQKQLELKVAELVQFLLIKDQRKIPIRRTDILRHVVGDYK 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 DVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLEPVEADAEMRGDQGTPISGLLM :: :.::. :::::.:::::.::::::.:..:::.: ::::: ::::::::::: .:::: gi|114 DVLPELLRRAAERLEYVFGYRLVELEPRSNTYILVNTLEPVEEDAEMRGDQGTPTTGLLM 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPH :::::::::::.: :::::::::::::.:::::::::::::::::::::::::.:::::: gi|114 IVLGLIFMKGNSIKETEVWDFLRRLGVHPTKKHLIFGDPKKLITEDFVRQRYLDYRRIPH 160 170 180 190 200 210 250 260 270 280 290 mFLJ00 TDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPTQYCEALADEESRARPATAS- :::::::::::::::::::::::::::::.:.:::::::.::::::::::.:::: :. gi|114 TDPVDYELQWGPRTNLETSKMKVLKFVAKIHHQDPKDWPAQYCEALADEEARARPQPAGP 220 230 240 250 260 270 300 mFLJ00 APATSS .:::. gi|114 SPATAPAPTLSPVS 280 >>gi|109080442|ref|XP_001109764.1| PREDICTED: similar to (299 aa) initn: 1523 init1: 1401 opt: 1478 Z-score: 1667.8 bits: 316.6 E(): 3.5e-84 Smith-Waterman score: 1515; 77.926% identity (87.960% similar) in 299 aa overlap (27-303:1-299) 10 20 30 40 50 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDW--GG------AGE ::::::.::: . ::. . :: :: ::: gi|109 MLQKPRNRGRSGGQAERDSDWSRGGNSGASRAGE 10 20 30 60 70 80 90 mFLJ00 -----------EGPSTSRAAGGS--SQGSRASLSAPTVGPRTQKQLELKVAELVQFLLIK :.:::::. ::: :::.: : ..:.:::::::: ::::.::::::::: gi|109 HARARRDGFAEEAPSTSRGPGGSQGSQGARRSQASPAVGPRTQKQQELKVSELVQFLLIK 40 50 60 70 80 90 100 110 120 130 140 150 mFLJ00 DQKKIPIKRTDILKHVVGDYRDVYPNLLKLAAERLQYVFGYKLVELEPKSHSYILINMLE :::::::::.::::::.:::.:..:.::: ::::::::::::::::::::..::::: :: gi|109 DQKKIPIKRADILKHVIGDYKDIFPDLLKRAAERLQYVFGYKLVELEPKSNTYILINTLE 100 110 120 130 140 150 160 170 180 190 200 210 mFLJ00 PVEADAEMRGDQGTPISGLLMIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHLIFGDP ::: :::.::::::: .::::::::::::::::. :::::::::::::::::::.::::: gi|109 PVEEDAEVRGDQGTPTTGLLMIVLGLIFMKGNTVKETEVWDFLRRLGVYPTKKHFIFGDP 160 170 180 190 200 210 220 230 240 250 260 270 mFLJ00 KKLITEDFVRQRYLEYRRIPHTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQDPKDWP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 KKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWP 220 230 240 250 260 270 280 290 300 mFLJ00 TQYCEALADEESRARPA-TASAPATSS .::::::::::.:::: ..:::.. gi|109 AQYCEALADEENRARPQPSGSAPSS 280 290 >>gi|114656068|ref|XP_001163393.1| PREDICTED: hypothetic (304 aa) initn: 1517 init1: 1405 opt: 1471 Z-score: 1659.8 bits: 315.2 E(): 9.6e-84 Smith-Waterman score: 1527; 78.033% identity (86.557% similar) in 305 aa overlap (27-305:1-304) 10 20 30 40 50 mFLJ00 SGARSLGGVFWRLLLPIAACSPPTGDMLQKPRGRGRPSTQADPERDW--GG------AGE ::::::.::: : ::. .::: :: ::: gi|114 MLQKPRNRGRSSGQAERDRDWSHGGNPGASRAGE 10 20 30 60 70 80 90 mFLJ00 -----------EGPSTSRAAGGSS-------QGSRASLSAPTVGPRTQKQLELKVAELVQ :.:::::. :::. ::.: . .::.::::.::::::::.:::: gi|114 DARVLRDGFAEEAPSTSRGPGGSQGSQGPSPQGARRAQAAPAVGPRSQKQLELKVSELVQ 40 50 60 70 80 90 100 110 120 130 140 150 mFLJ00 FLLIKDQKKIPIKRTDILKHVVGDYRDVYPNLLKLAAERLQYVFGYKLVELEPKSHSYIL ::::::::::::::.::::::.:::.:..:.:.: ::::::::::::::::::::..::: gi|114 FLLIKDQKKIPIKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYIL 100 110 120 130 140 150 160 170 180 190 200 210 mFLJ00 INMLEPVEADAEMRGDQGTPISGLLMIVLGLIFMKGNTITETEVWDFLRRLGVYPTKKHL :: ::::: ::::::::::: .::::::::::::::::: :::::::::::::::::::: gi|114 INTLEPVEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEVWDFLRRLGVYPTKKHL 160 170 180 190 200 210 220 230 240 250 260 270 mFLJ00 IFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYELQWGPRTNLETSKMKVLKFVAKVHNQD :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|114 IFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQD 220 230 240 250 260 270 280 290 300 mFLJ00 PKDWPTQYCEALADEESRARPATASAPATSS :::::.::::::::::.:::: :.:: :: gi|114 PKDWPAQYCEALADEENRARPQP-SGPAPSS 280 290 300 305 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 23:55:46 2009 done: Fri Mar 13 00:01:27 2009 Total Scan time: 788.590 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]