Comparison of KIAA cDNA sequences between mouse and human (FLJ00211)

<<Original sequence data>>

mouse  mFLJ00211 (mbg20018)     length:   5942 bp, CDS:     2 -   919
human     (sj05061)     length:   4463 bp, CDS:     2 -   643

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:    253 -   253       1        0      0.0
  CDS:    254 -   898     540      103      16.0
3'UTR:    899 -  6066    1979     1821      47.9

amino acid

  CDS:    254 -   898     190       24      11.2
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mbg20018     1 CTCTGGGGCGCGCTCGCTCGGCGGAGTCTTCTGGCGGTTGCTGCTCCCGA 50
                                                                 
sj05061      1 .................................................. 1

            51 ----+----*----+----*----+----*----+----*----+----* 100
mbg20018    51 TCGCGGCCTGCTCTCCGCCGACCGGGGACATGTTGCAGAAGCCGAGGGGC 100
                                                                 
sj05061      1 .................................................. 1

           101 ----+----*----+----*----+----*----+----*----+----* 150
mbg20018   101 CGCGGTCGGCCCAGCACGCAGGCTGACCCGGAGCGGGACTGGGGAGGCGC 150
                                                                 
sj05061      1 .................................................. 1

           151 ----+----*----+----*----+----*----+----*----+----* 200
mbg20018   151 TGGCGAGGAAGGACCCAGCACGTCCCGCGCCGCGGGCGGCTCCTCCCAGG 200
                                                                 
sj05061      1 .................................................. 1

           201 ----+----*----+----*----+----*----+----*----+----* 250
mbg20018   201 GCTCCCGCGCTTCCCTGTCGGCCCCGACCGTGGGGCCGCGCACTCAGAAG 250
                                                                 
sj05061      1 .................................................. 1

           251 ----+----*----+----*----+----*----+----*----+----* 300
                  L  E  L  K  V  A  E  L  V  Q  F  L  L  I  K  D 
mbg20018   251 CAGCTGGAGCTGAAGGTGGCCGAGCTGGTGCAGTTCCTGCTGATCAAGGA 300
                 |||||||||||| ||| ||||||||||||||||| ||||||| || ||
sj05061      1 ..GCTGGAGCTGAAAGTGTCCGAGCTGGTGCAGTTCTTGCTGATTAAAGA 48
                  L  E  L  K  V  S  E  L  V  Q  F  L  L  I  K  D 

           301 ----+----*----+----*----+----*----+----*----+----* 350
                Q  K  K  I  P  I  K  R  T  D  I  L  K  H  V  V  G
mbg20018   301 CCAGAAGAAGATCCCGATCAAGCGGACGGACATCCTGAAGCACGTGGTGG 350
               |||||||||||| |||||||||||| | ||||| |||||||||||  | |
sj05061     49 CCAGAAGAAGATTCCGATCAAGCGGGCCGACATACTGAAGCACGTCATCG 98
                Q  K  K  I  P  I  K  R  A  D  I  L  K  H  V  I  G

           351 ----+----*----+----*----+----*----+----*----+----* 400
                 D  Y  R  D  V  Y  P  N  L  L  K  L  A  A  E  R  
mbg20018   351 GCGACTACCGGGACGTGTACCCCAACCTTCTGAAGCTGGCCGCCGAGCGC 400
               | ||||||  |||| | | |||| ||||  | || | |||||||||||||
sj05061     99 GGGACTACAAGGACATCTTCCCCGACCTCTTCAAACGGGCCGCCGAGCGC 148
                 D  Y  K  D  I  F  P  D  L  F  K  R  A  A  E  R  

           401 ----+----*----+----*----+----*----+----*----+----* 450
               L  Q  Y  V  F  G  Y  K  L  V  E  L  E  P  K  S  H 
mbg20018   401 CTGCAATACGTGTTCGGGTACAAGCTGGTGGAGCTGGAGCCCAAGAGCCA 450
               || || ||||| |||||||| ||||||||||| || || ||||||||| |
sj05061    149 CTCCAGTACGTCTTCGGGTATAAGCTGGTGGAACTTGAACCCAAGAGCAA 198
               L  Q  Y  V  F  G  Y  K  L  V  E  L  E  P  K  S  N 

           451 ----+----*----+----*----+----*----+----*----+----* 500
                S  Y  I  L  I  N  M  L  E  P  V  E  A  D  A  E  M
mbg20018   451 CAGCTACATCCTCATCAACATGCTGGAGCCGGTGGAGGCGGATGCGGAGA 500
               ||  ||||||||||||||||  |||||||| ||||||| |||||| ||||
sj05061    199 CACTTACATCCTCATCAACACCCTGGAGCCTGTGGAGGAGGATGCCGAGA 248
                T  Y  I  L  I  N  T  L  E  P  V  E  E  D  A  E  M

           501 ----+----*----+----*----+----*----+----*----+----* 550
                 R  G  D  Q  G  T  P  I  S  G  L  L  M  I  V  L  
mbg20018   501 TGAGGGGCGATCAGGGTACCCCCATCTCGGGCCTGCTTATGATAGTCCTG 550
               ||||||| || || || || ||||   ||||||| || ||||| ||| | 
sj05061    249 TGAGGGGTGACCAAGGCACGCCCACTACGGGCCTCCTGATGATCGTCTTA 298
                 R  G  D  Q  G  T  P  T  T  G  L  L  M  I  V  L  

           551 ----+----*----+----*----+----*----+----*----+----* 600
               G  L  I  F  M  K  G  N  T  I  T  E  T  E  V  W  D 
mbg20018   551 GGGCTTATCTTCATGAAAGGCAACACCATCACCGAGACTGAGGTCTGGGA 600
               ||||| ||||| ||||| |||||||||||||  || ||||| | ||||||
sj05061    299 GGGCTCATCTTTATGAAGGGCAACACCATCAAGGAAACTGAAGCCTGGGA 348
               G  L  I  F  M  K  G  N  T  I  K  E  T  E  A  W  D 

           601 ----+----*----+----*----+----*----+----*----+----* 650
                F  L  R  R  L  G  V  Y  P  T  K  K  H  L  I  F  G
mbg20018   601 CTTCCTGCGACGGCTCGGAGTGTACCCCACTAAGAAACACTTAATTTTTG 650
               ||| ||||| ||  | || || |||||||| ||||| || |||||||| |
sj05061    349 CTTTCTGCGGCGCTTAGGGGTCTACCCCACCAAGAAGCATTTAATTTTCG 398
                F  L  R  R  L  G  V  Y  P  T  K  K  H  L  I  F  G

           651 ----+----*----+----*----+----*----+----*----+----* 700
                 D  P  K  K  L  I  T  E  D  F  V  R  Q  R  Y  L  
mbg20018   651 GCGACCCAAAGAAACTCATTACCGAAGACTTTGTGCGGCAGCGCTACTTG 700
               | || ||||||||||||||||| || ||||||||||| ||||| ||| ||
sj05061    399 GAGATCCAAAGAAACTCATTACTGAGGACTTTGTGCGACAGCGTTACCTG 448
                 D  P  K  K  L  I  T  E  D  F  V  R  Q  R  Y  L  

           701 ----+----*----+----*----+----*----+----*----+----* 750
               E  Y  R  R  I  P  H  T  D  P  V  D  Y  E  L  Q  W 
mbg20018   701 GAGTACCGGAGGATACCCCACACCGATCCTGTGGACTATGAATTACAGTG 750
               || |||||| |||||||||||||||| || || ||||| ||||| |||||
sj05061    449 GAATACCGGCGGATACCCCACACCGACCCCGTCGACTACGAATTCCAGTG 498
               E  Y  R  R  I  P  H  T  D  P  V  D  Y  E  F  Q  W 

           751 ----+----*----+----*----+----*----+----*----+----* 800
                G  P  R  T  N  L  E  T  S  K  M  K  V  L  K  F  V
mbg20018   751 GGGCCCGCGAACCAACCTGGAAACCAGCAAGATGAAAGTTCTTAAGTTTG 800
               ||||||||||||||||||||||||||||||||||||||||||||||||||
sj05061    499 GGGCCCGCGAACCAACCTGGAAACCAGCAAGATGAAAGTTCTTAAGTTTG 548
                G  P  R  T  N  L  E  T  S  K  M  K  V  L  K  F  V

           801 ----+----*----+----*----+----*----+----*----+----* 850
                 A  K  V  H  N  Q  D  P  K  D  W  P  T  Q  Y  C  
mbg20018   801 TGGCCAAAGTCCATAACCAGGACCCCAAAGACTGGCCCACACAATACTGC 850
               ||||||| |||||||| || |||||||| ||||||||  | || ||||| 
sj05061    549 TGGCCAAGGTCCATAATCAAGACCCCAAGGACTGGCCAGCGCAGTACTGT 598
                 A  K  V  H  N  Q  D  P  K  D  W  P  A  Q  Y  C  

           851 ----+----*----+----*----+----*----+----*----+----* 900
               E  A  L  A  D  -  G  E  *  G  *  T  Y     C  *    
mbg20018   851 GAGGCTTTGGCAGATGA.GGAGAGTAGGGCTAGACCTGCAACTGCTAGTG 899
               ||||||||||||||||| |||||  ||||| ||||||       ||||||
sj05061    599 GAGGCTTTGGCAGATGAGGGAGAACAGGGCCAGACCT...CAGCCTAGTG 645
               E  A  L  A  D  E  G  E  Q  G  Q  T  S     A  *    

           901 ----+----*----+----*----+----*----+----*----+----* 950
mbg20018   900 CCCCAGCCACATCCTCTTGAACTCTTTGAGTTATGGTCTGAGGGACTCTG 949
                ||||||  ||||||||||||       || |    || ||||||| |  
sj05061    646 GCCCAGCTCCATCCTCTTGAA.......AGGTGGATTCAGAGGGACCCCC 688

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mbg20018   950 G.....................AGATCCAGTATAAAAGAACAGGGGGAAT 978
               |                     ||   |||| || | ||   |||| |  
sj05061    689 GGGACAAGGGTCTGAGACCCAAAGGCACAGTTTAGAGGATTGGGGGAAGG 738

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mbg20018   979 GGG...GGTCGGAGGAAGCTTGATTCTGCTACGCATAAAGGCCTTGGAGC 1025
               | |   |  |  ||| ||| |  | |||  |    |  |     || |||
sj05061    739 GAGAACGAACCCAGGGAGCATATTGCTGTAAACGCTTCAATGTGTGTAGC 788

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mbg20018  1026 GTTAGGATGTGTT..GCAGGGTTTTTTGTTTGATTTTTTTATTATTATTA 1073
                ||||||||||||    | | ||| || ||| | | || | ||||| |  
sj05061    789 TTTAGGATGTGTTTGCAAAGTTTTGTTTTTTTAATGTTGTGTTATTTTGC 838

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mbg20018  1074 TTATGGTTTGGAGCTTTAAA..............TTTTCATTTAATTGTC 1109
               |   | |||  | || ||||              |||| ||||  |  ||
sj05061    839 TCCAGATTTTCATCTATAAACAAAGGAGCATTTGTTTTGATTT..TACTC 886

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mbg20018  1110 TTTTTGTTTATAAAGAGTTTTCTAACTTTCTAAACCTAAATGAAA..... 1154
               |||||| |   ||| | ||| ||| |||  |||| | || || ||     
sj05061    887 TTTTTGGTATAAAAAATTTTGCTAGCTTAGTAAAACGAATTGGAAAACTT 936

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mbg20018  1155 TTGTATGATGCCAAACA...TATTCAAGAAGGAACACTTTGGTAAATTGC 1201
                  ||||||    ||||    || ||||||||||||| |  |||| ||||
sj05061    937 GACTATGATCTGGAACAGATAATGCAAGAAGGAACACATAAGTAAGTTGC 986

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mbg20018  1202 TTTGATGTTCTAGACGATAAAGAAACAGGGTAGCTATTATCTTAATGA.. 1249
               |||| ||  | |||  ||||| |||     || |   | || |||  |  
sj05061    987 TTTGGTG.CCAAGAAAATAAA.AAAGCTATTATCAGGTCTCCTAACTACC 1034

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mbg20018  1250 CTAGTTCCTGGGGAAAAATAAAAGTCTTTTTAAAATTGAAAATAAAATTG 1299
               | ||||  |  |||||||||||||| ||| ||||||| |||| || | | 
sj05061   1035 CCAGTTTGTAAGGAAAAATAAAAGTTTTTATAAAATTAAAAAAAATAATT 1084

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mbg20018  1300 TTTTAGCTTCTTGTCAACACAGC........TTTAAATATACATATTCTG 1341
                  ||  | ||| | |    | |        |||   ||||  |  |   
sj05061   1085 GCCTATATCCTTATTATGTTAACCTATTTTATTTTTCTATATTTCGTACA 1134

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mbg20018  1342 TTGGGTGTGAGCACTTGTGGTCCCACGAAATCTATGTGATGTGTTTTCTA 1391
               |        |  | |  |||| ||| | |||   ||| |||| |||||| 
sj05061   1135 TATATAAGTATTATTCATGGTTCCAAGCAATGAGTGTAATGTATTTTCTC 1184

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mbg20018  1392 GCA........TTTTTATATTCATAATCATAATTCTGTTGTCCTA..... 1428
                ||        | |||||||||||||| ||    || |  | |||     
sj05061   1185 CCAATAGTAATTGTTTATATTCATAATTATTCAGCTCTGCTGCTAAACAC 1234

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mbg20018  1429 TGGGTTCTACTTAAGATTCTTTT..............CTAGTATAACAAA 1464
                  |||| ||||    || || |               || || || |||
sj05061   1235 GTAGTTCCACTTCGTTTTTTTCTTCTTGCTACTGTAGTTATTACAATAAA 1284

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mbg20018  1465 TACTATACTTTTGAGTCAGTTCACCATTATTATTATTATTGTTTCCCTGT 1514
               |||| || ||||||  || || | |||| |   | || |           
sj05061   1285 TACTGTATTTTTGAAGCACTTAAGCATTGTGTGTTTTTT........... 1323

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mbg20018  1515 TAGAAATTGCGGCTAAAAAGGAAATGTCATGATT........CCAGACTT 1556
                  |||| | || | |  ||  ||| |||||| |         ||   | 
sj05061   1324 ...AAATCGTGGGTCATGAGAGAATTTCATGACTGGAAATCAACATCTTA 1370

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mbg20018  1557 TTTTTTTTTTTCCATGATAAGCTAA..........GTCAATGGTGTTGCA 1596
                  |||||  | |||  |||| | |          ||  | | |||| ||
sj05061   1371 AAGTTTTTGCTACATATTAAGGTCAATGCTGTTTTGTAGAAGTTGTTTCA 1420

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mbg20018  1597 GAAGTGTGTGAATGTGTATTAGAGCAAGTTGTAAAAATCGTTAGGTCTC. 1645
                   ||||||||     || ||    |   |   ||||   |   || | 
sj05061   1421 CTTTTGTGTGAAACAAAATCAGGATCATGAGGTGAAATATATTTCTCACT 1470

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbg20018  1646 .............CGGTTTATAAAACAGTGTCGTGTCGTATCGATTAACC 1682
                             || ||||||||||      |  |||| | |||||||
sj05061   1471 GTGGATCTCAAAAAGGCTTATAAAACA.....ATAGCGTAACCATTAACC 1515

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbg20018  1683 AGGCCTGATTGGGAACCACACTGCCCAAGTGCAGATCCT.GTTCCACCAG 1731
               | ||||| ||||||| |  |||| |   ||  ||||||| |  |||||| 
sj05061   1516 ATGCCTGTTTGGGAATCGGACTGTCTGGGTTGAGATCCTGGCCCCACCAT 1565

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbg20018  1732 AAGAATTTAGCTTGTGTATCTGTAGAATCAAGTGTGCCCTTAAGGTGAAT 1781
               ||  |          |||| || |    ||   || | ||||   || ||
sj05061   1566 AACTA..........GTATATGAATTTACATAGGTTC.CTTAGTTTGTAT 1604

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbg20018  1782 AAATAGGAAACGAGATAAAGCTGAGCAAAGCCCTGGTGTGGAAGAATAGT 1831
                 |                                          ||  |
sj05061   1605 GCA.........................................GATGTT 1613

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbg20018  1832 TCTTTAGAAGAACTCAGGGTGATGTCTGGTGCGGACAGACCAGTGTGAAC 1881
               |||| |   | |    || |   |||                        
sj05061   1614 TCTTGACCTGTAAAATGGTTTTAGTC........................ 1639

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbg20018  1882 AAGGCTACCACAAGATGAGGGGCACTTTATGTTGCTATAGGTGAGTCAGG 1931
                         |  |||| || | | ||||| |                  
sj05061   1640 ..........CGTGATGTGGAGAATTTTATTT.................. 1661

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbg20018  1932 AAACAAGTTCACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACAC 1981
                             |||| ||   ||| ||  |  |   |  ||      
sj05061   1662 ...........GTTATTCTTTAATGTTTTTATTTTTTATTCTCC...... 1694

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbg20018  1982 TGGGCACAGGCAGTAAGTACTGTTGTTCTGAGAAGAGTTGCAAGTTCGTC 2031
                                     ||| ||||    ||| ||| | ||  | 
sj05061   1695 ......................TTGGTCTG....GAGCTGCCACTTTTTA 1718

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbg20018  2032 ATCAGAAGAACAAACAGGGTGGCAGTGAGGACAGGTGACTTTAATCAGCC 2081
               |  | |                          |  |  |||||       
sj05061   1719 AATATA..........................ACTTTTCTTTATCTTTTT 1742

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbg20018  2082 CTGAACTAGAGGCCAACTAGAGGAGTCTGTGGTAGCTACGAGGTCTGAAG 2131
                |  |    |  || |  |||| | |   ||||                 
sj05061   1743 TTCCAAATCATTCCTAGGAGAGCAATTCCTGGT................. 1775

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbg20018  2132 GGACGAGAGGGGCTACTGACTGTTGGCTTGTGTTGCAGTAGTGTCCTAGG 2181
                           | |  ||  ||   || || |  |  || |||    ||
sj05061   1776 ...........TCAAAAGATAGTCCTCTAGTCTCACTCTATTGTATGGGG 1814

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbg20018  2182 ATGCTTTCTCCAGCTGTGACATACCATGACCACAGGCAGCTTGGAAGGTA 2231
               |          |  |      ||   |||       |  | | |||  ||
sj05061   1815 A.........AATATAACGTGTATGGTGAGTGTGCCCCACATAGAACATA 1855

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbg20018  2232 AGGGTTTTATTTCAGTTGTAGTCCATCACTGAGGAATCCTGGAGGCTGGA 2281
               || |    |  | || | ||   |             |  ||  | | | 
sj05061   1856 AGAGCAGGACATAAGATCTACCTC.............CTAGGGAGTTAGG 1892

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbg20018  2282 AATAAAGTAGAGGCTATGAAGGAACACTGCTAACTGGCTTGCCCAGCCTG 2331
                |||  | | ||| ||||  |       |||  |||||   |  |   ||
sj05061   1893 TATAGGGAAAAGGGTATG.GGTCTTGGGGCTGTCTGGCAAACTGAATTTG 1941

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbg20018  2332 CTTAAACAGCTCAGGACCACTTGCCCCAGGGATAGCATTATCTACAGTGA 2381
                 |  || ||||| |   ||||| |     | | |               
sj05061   1942 AAT.TACGGCTCATGCTAACTTGTCAGCATGGTGG............... 1975

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mbg20018  2382 ACTGGGCCCTCCCACATCAAAAATCGATCAAGAAAGTGTTCCACCTGGTG 2431
                                                            | |||
sj05061   1976 .............................................TTGTG 1980

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbg20018  2432 GAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCCCAGTTTAT 2481
               |  | | ||| | |                          | |  |  ||
sj05061   1981 GGGGTAGGTTTTAA.........................GCTCTCTGAAT 2005

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mbg20018  2482 GTCAAGTTGACTAAACAGCACGAGGAGATCTGGAAATTTTTAGGCAAGGA 2531
                |||| ||  ||  | |          ||  | ||| |  |||  |   |
sj05061   2006 CTCAATTTATCTGTAAA..........ATGAGAAAAATAATAGCTATATA 2045

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mbg20018  2532 CTAGTTTATCCTTGAGTCCCCCTTCTTGGTTACTTTTTAGGTTAGTGTAT 2581
                ||||||                                        |||
sj05061   2046 ATAGTTT........................................TAT 2055

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbg20018  2582 GAGTTACCTTCTGCCCATGGGCTCCTGACCTGAGTCAGCTTTCGGTTGTG 2631
               |   ||  |       | | | || |   |  | |  |  |||     | 
sj05061   2056 GCACTAAATGAACTAGAAGAGTTCATAGTCCCATTGTG..TTCCTCCATT 2103

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbg20018  2632 CTGTGCTGCTTAAGTTGTCCTCTGTGCCCATTGTCTCAGAACTGTCAGGT 2681
                 |||  ||  | | |||  |   |||  |  |  |||  ||  |     
sj05061   2104 ACGTGTAGCAGATGCTGTTTTTAATGC..AGAGATTCAACACGTTT.... 2147

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbg20018  2682 ACAGTAATGGTATCCCGGTTTTCCGAGGGCTTCACAGTTTACTGTCAAGC 2731
                                 | ||| | ||||     |||| | |||     
sj05061   2148 ..................TATTCAGTGGGCAAATAAGTTAATTGT..... 2174

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbg20018  2732 TATTTTGTTGGAGATGCTGTGCTACATTAGAAGCTAGATA.AACTCTTAT 2780
                 ||| |  ||||     ||||| ||    || || || | ||  |  ||
sj05061   2175 ..TTTAGGGGGAG.....GTGCTGCAAATTAACCTTGAAATAAGGCAAAT 2217

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbg20018  2781 CTTTCTTGACAGGTTCCAGAACTGCATATCATGCCATTATATAACTTTAC 2830
                ||| |     ||    | || || |  ||||          |||  |  
sj05061   2218 ATTTTTAACTCGGGGAAAAAAGTGAACTTCAT.........CAACACTGG 2258

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbg20018  2831 ATGTATGTGCACGTTCACGGAGAATATGTTTTTCTTTTGTGGGCGTTCAT 2880
               | | |           | |     ||      ||| | ||| |  |  | 
sj05061   2259 ACGGA...........ATGTCATTTAAAAGAGTCTATAGTGAGTATGGAG 2297

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbg20018  2881 GGCTTACATAAGTTGCCTTGTGTCCTTTATCACAGCACAGCGTTTTTTTT 2930
               |  |   ||| |||                      || | ||||| |||
sj05061   2298 GAATGTGATAGGTT......................ACTGGGTTTTATTT 2325

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbg20018  2931 AACCAGCTATTTTTGACGTTACTGTATCTTTGAAGTTACATGTATACATT 2980
                |     |    |||   ||    | | ||| |         |||   | 
sj05061   2326 CATTCTGTTGAATTGGGATTTGCATTTGTTTCATCAGTGGAATATGTTTG 2375

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbg20018  2981 GAAGTTAATGTATGCATAATCTGATTAATTCGCTTTGACTTCCTTTCATG 3030
               |   |||    | ||||    |  | |  |   ||| | |||  |  || 
sj05061   2376 GCCCTTA...CAGGCATTTCTTCTTGATCTGCATTTTATTTCAGTGTATA 2422

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbg20018  3031 AAGGGAGAGTACAACTTCCTAATGTCTTCCCATCAGGGAGGTGTGTGCCT 3080
               |         ||  ||||||     ||   |  |    |  |   || ||
sj05061   2423 A.........ACTCCTTCCTGCCTCCTGGTC..CCCTTACCTCCCTGACT 2461

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbg20018  3081 CAGGAGTTCAAGCCAGAAGCCAACAGTTATCAGTGACACTTGCCAAATGG 3130
               |||   |     ||  | |||         |  ||| ||| ||  | |  
sj05061   2462 CAGCTTTCTCCTCCTCATGCC.........CTCTGATACTCGC..ATTCT 2500

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbg20018  3131 CTCCTGAACCCATCCATTTGCTCCCTCACCAGCACCTAGACAGTTCTTAC 3180
               | |||| |       | ||  | ||   |   ||||    ||||| |  |
sj05061   2501 CACCTGTATAATAAAAATTATTACCCAGCAGTCACC..ACCAGTTATATC 2548

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbg20018  3181 TGTTTTTGCCAGTCGCCCCACGCTCTGCAACCCATGTGAACACTCAGCTT 3230
               ||     || |    |||| |||| |              | |  || | 
sj05061   2549 TG...AGGCAAAATTCCCCCCGCTTT.............TCTCAGAGGTG 2582

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbg20018  3231 TTACAGCCCTGTGGTGGATGTGGGTGCATCGTTAATACTTCACTGTGCCA 3280
               |||      |    | |||     ||  ||   |||  |  | | ||  |
sj05061   2583 TTAGCAATTTACCATCGATAATCTTGTTTC..AAATTTTAAAATATGAAA 2630

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbg20018  3281 TCTGCTCTCCTGAGGTGACATTAAGCATCAGCCTGCCTTTTACTCTCCAT 3330
                     |  | ||||  |||| |||   |    |  ||||| ||   || 
sj05061   2631 ......CATCAGAGGCCACATCAAG..GCCTTATATCTTTTCCTTCTCAC 2672

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbg20018  3331 TTTGACCATTAGATTTTAAACAGCAGATGTTTTTGTTTGTTGGTTTGTGA 3380
                 |  |||         |   | || | || | ||  | | ||  |||  
sj05061   2673 CCTCCCCA........GAGGTAACAAAAGTCTGTGGCTATCGGGCTGTTG 2714

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbg20018  3381 GAACTCTTTGTATCTTCTGTGCATCAGTCCAATTGCAAATACCATCTGCG 3430
                |   |||| ||                                      
sj05061   2715 TATGACTTTATA...................................... 2726

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbg20018  3431 GTTTTTGGTTTTGTCATATTTTACTTTAATGTGTCTTAATTATCAGTATT 3480
                                |||||||| ||        ||   || |  | |
sj05061   2727 .................ATTTTACTATACATGTATATATACATAACCAAT 2759

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbg20018  3481 GTAGCCCTGTATTTTGTAATACCTCTTTAAAATTCTAATCTTAATTATGA 3530
                |||   | ||||||||      || | |    | ||| |    ||| | 
sj05061   2760 ATAGAGTTTTATTTTGTGGGCTTTCATGATTTATATAAGCGGTGTTACGT 2809

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbg20018  3531 AGGTATTTATTTTTGAGAATTTCCTACTAAGTACTCTATTCACCTTGATC 3580
                 ||  |||               | | |  | || || |||        
sj05061   2810 GTGTCCTTA...............TGCAACTTGCTGTACTCA........ 2836

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbg20018  3581 CCACCCTCCCCACTTCAACTCTTCCTATGCCCCTCCCCCCTTCAAAATCC 3630
                                                                |
sj05061   2837 .................................................C 2837

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbg20018  3631 TAACTGCTGAGAACATTAGACTGACCAGTTGGGATAGACAATCAAGTAGG 3680
               | ||   |  | |  | ||| | | |  |  |||||          || |
sj05061   2838 TCACCATTATGTATTTGAGATTCAGCCATGTGGATA..........TATG 2877

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbg20018  3681 GACTCATCCCTGAAGAAGACTAATTCTCCCTCTCAGCCATCGTTTAATAG 3730
                |  | |   | |   |   ||||| | | | |     || |   || | 
sj05061   2878 TAGACCTGATTCACTCATTTTAATTGTTCTTTT.....ATGGGGGAAAAA 2922

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbg20018  3731 CCAGTGGTTCTTCATCTAGGGGCAAGGCCTTAAGAGATTCCCCCATCCGC 3780
                 | |     ||| |  | |         |||||   || ||        
sj05061   2923 TAACTATCCATTCCTTAATGTCTGGACATTTAAGGTCTTTCC........ 2964

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbg20018  3781 ACTGGTGTATCAACTGGTATTGTCACTTTTTAGATCTTGTTTAGGTAGTC 3830
                   ||   |  |    |   | || | |  ||  ||| ||||||     
sj05061   2965 ...AGTTCTTTGAGATTTGCAGGCATTGTACAGTACTTCTTTAGG..... 3006

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbg20018  3831 ATACTGTTAAGATTATGTAGGTTCAGCTTCTCTGTCATCTGTAAAGGACA 3880
                 ||   |  || | | |     |||   |      | |  | |||||| 
sj05061   3007 .CACATGTGTGAGTTTCTCCAGCCAGAAACAAATGGAGCAATCAAGGACT 3055

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbg20018  3881 CAATCTCACAGCAGACATCCCGGTTCTCTGGTTCTTATAACCTTCCTGCC 3930
                   |  |            | | |||   | |  | | |  || |   |
sj05061   3056 ATTGCCAA...........GCTGCTCTTGAGCTTGTGTCAAGTTACACTC 3094

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbg20018  3931 CCGTCTTCTATGCCACTTCCGAGCCTTGGGTGTGGTGGTTGTGTTGAGCA 3980
               || ||         || |   |  |     |||  || || |||| | ||
sj05061   3095 CCATC........AACATTTTATACAGTTTTGTTTTGTTTTTGTTTACCA 3136

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbg20018  3981 CCCAGTGGTTAGCTGTTCTCTGCTCTCTGAGCCGGTGAAGACTTTGGTGA 4030
                 |              |||  |  ||    || ||||| |||       
sj05061   3137 ATC.............CCTCCACCTTCACCCCCTGTGAACACT....... 3166

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbg20018  4031 TAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGGCTG 4080
                                                               ||
sj05061   3167 ................................................TG 3168

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbg20018  4081 CGCTTGTCTGTGGCTTTAAGGATAAGTGTTGAAAGAGGAGTTAGGAATTA 4130
                 ||| || ||  ||||     | ||   |    |   |||  | ||| |
sj05061   3169 GCCTTTTCAGTATCTTT.....TCAGCCATTCTGGTACAGTGTGAAATGA 3213

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbg20018  4131 CAGTGGCTTAAGGAAGTGGCAGGAGTAGGTTCTTCTCTAGGGTTCATGAC 4180
                | |   ||| || | |                                 
sj05061   3214 TAATTTATTACGGTATT................................. 3230

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbg20018  4181 CTCCCCAGCCACAGGTGAGTCTTAGTACCAAGCATGAATTCCCTCCTGTG 4230
                     |   | |  ||   |||| ||  ||   | | |  |  ||| | 
sj05061   3231 .....AACTTATACCTGTTGCTTACTAGTAATGTTAAGTATCTGCCTATC 3275

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbg20018  4231 GAGTGGGTCTTACATTCAACTAGACAACTCTTAGTTACCCCCAAGATGGC 4280
                  ||                                             
sj05061   3276 TTTTG............................................. 3280

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbg20018  4281 AACTGCCACTCTTGCACCCTTGGGTGTATCTTGCAATGGTTTATGCTCAT 4330
                     | |||   |    ||| ||||    |   |||  |||  |  ||
sj05061   3281 ......CTCTCACTCCTTTTTGAGTGTCAGATTTCATGTCTTAGACCTAT 3324

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mbg20018  4331 AGGCTTTGCACTGGATGCCATTATTAACTGCTTTTCTCTCTTGGCTGTTT 4380
                    |||   || | | |||  |||  || | | |         |||| 
sj05061   3325 TTCTATTGATTTGTAAGACATCTTTATATGTTCTAC........ATGTTA 3366

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mbg20018  4381 TCACAGCATCTCTGGGTACTATGAAAGCTAGTCCTCAGGGAGAAGGCTTC 4430
                  ||   |||       ||||                           |
sj05061   3367 ATCCATGGTCTGCTCTATCTAT...........................C 3389

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mbg20018  4431 TAGTTCAAATCTAATTCAAGTGACCAAGAGCAATGACAGTAGCCTGTTAT 4480
               |||| |||||                                        
sj05061   3390 TAGTGCAAAT........................................ 3399

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mbg20018  4481 TTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACA 4530
                                ||||   |||     |||   |  ||   || |
sj05061   3400 ................ACCTTCTCCCACATTTTCACTTCTTTTGGTCATA 3433

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mbg20018  4531 GCTGGCATTGCTTGCACACATTATGTATGCATGCATGTATGTATGTATGT 4580
                    ||||      | |  |  |     |||   ||| | || |     
sj05061   3434 CAGATCATTTGACCTAAATGTGTTACGATCATTAGTGTTTATAAG..... 3478

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
mbg20018  4581 ATGTATGTATGTATGTACATGAAGTGCATAGTATGTTTCCCCGTGACCTT 4630
                   |  ||  | |||  ||  ||||| |   |   ||||||    ||| 
sj05061   3479 ....AGCTACATTTGTGTAT..AGTGCTTTAAAAAATTCCCCTAATCCT. 3521

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
mbg20018  4631 TTCAAACATCCTCAGTGTTCTTTATCCCTTCCTCTCCCTCAGCCCTGCCC 4680
                   || ||  | | | |  ||| | ||||  |                 
sj05061   3522 ....AAAATTGTAAATATGTTTTCTGCCTTTTT................. 3550

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
mbg20018  4681 TCCAGCATCCTTCCCAGTTAATCCCTCCCTCTCCCATTTTCCCCTTTCTA 4730
                                            || |  | | | |    | | 
sj05061   3551 .............................TCCCTAAGTGTTCAAAGTTTT 3571

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
mbg20018  4731 GGAGCTCACTCTTTCCTCCTTCCCACTGCCCTTTTTATTTTCCTGGTATC 4780
               |    ||||  |||   | ||    ||||  || |   |    ||   | 
sj05061   3572 GATCTTCACATTTTATGCTTTTAATCTGCTTTTGTGTATGATGTGAGGTA 3621

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
mbg20018  4781 TGCAGCTACTCCAGTTTATATGCTCACATCTAAGGATTCAGAGTTAGGAT 4830
               || |  || |     |  | | |  | ||  |  |  |            
sj05061   3622 TGGAAATAGTTTTTGTATTTTTCCTATATGGATAGCCT............ 3659

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
mbg20018  4831 TCACAAACAGGAGAAAATATGCAGTGTTTGTCTTTCTGGGTCTGGGTTAG 4880
                       || |  |  | | ||   ||| |  ||      || | ||| 
sj05061   3660 ........AGCACCAGTTTTTCATCATTTATACTTTCCACACT.GATTAT 3700

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
mbg20018  4881 CTCACTCGGTATAATGATCTCTCGTTCACTTTGTTTGCCTTTCATTTTTC 4930
                 ||||| ||||  ||                       |  || | | |
sj05061   3701 GACACTCAGTATTTTG.......................TAGCAATGTCC 3727

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
mbg20018  4931 CTTTATATATGTATAGTATTCTGTAGTGTTTATACACCACATCTTCACTG 4980
               |       ||||||||     | ||  | |   ||   |    || | | 
sj05061   3728 C.......ATGTATAGATAAATTTATGGCTAGGACTGAATTGGTTTATTT 3770

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
mbg20018  4981 TCAGTTTATCAGCTGAAGAACATTTGGTTTCTGTTTTCTAGCTATTGTGA 5030
                |  |  ||  ||  || | |||   ||   | |||| |   | ||| | 
sj05061   3771 GCTATCCATTTGC.AAATACCATACTGTAATTCTTTTTTTCTTTTTGAG. 3818

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
mbg20018  5031 ACAGAGCAGTTAACATGGCTGCGCAGGTGTCTATGGAATAGGATGCGGAG 5080
               || |||   |   | || | || ||||           | |  |||   |
sj05061   3819 ACGGAGTCTTGCTCTTGTC.GCCCAGG..........CTGGAGTGCATTG 3857

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
mbg20018  5081 TGGTGTAGTAGGTCATGTGATAAATCTACTTTCAGTTTTTTGAGGATTTT 5130
                       | ||    |||  |  ||| | | | |  ||     |||| |
sj05061   3858 GCACAATCTTGGCTCAGTGCAATCTCTGCCTCCTGGATTCAAGCGATTCT 3907

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
mbg20018  5131 CCACACTGATTCCTATCATGGCTGCACCAGTTTGCAAACTCAGCCGCAGT 5180
               ||   || |                        ||   || ||  || | 
sj05061   3908 CCTGCCTCA........................GCCTCCTGAGTAGCTGG 3933

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
mbg20018  5181 GAATGAGTCTTCCTTCCCCACCCCCTCCTCAGCATTCACTGTCAGCTTTT 5230
               || |              ||    | |  || ||    | |  |  ||||
sj05061   3934 GATT.............ACAGGTGCCCGCCACCACGTCCGGCTAATTTTT 3970

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
mbg20018  5231 TTATTCATCTTAGCCATTCTGACCTGGCGTTAATGAAATCTCAAAAGTAG 5280
                || |  |  |||       |||  ||  ||       |  | |  || |
sj05061   3971 GTACTTTTAGTAG......AGACGGGGTTTTGCCATGTTGGCCAGGGTGG 4014

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
mbg20018  5281 TTTTAA..TTCGTATTAAAGATAGTTT...TGTGTCTTTTTTTGAGAATT 5325
               | | ||  | |  | |  || || | |    |  ||    |   | | | 
sj05061   4015 TCTCAAACTCCTGACTTTAGGTAATCTGCCCGCCTCGGCCTCCTAAAGTG 4064

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
mbg20018  5326 CTTTGATTAGATGCTAGCTCACTTTTAAGAAGTTGTTTTGTTTTGACTCT 5375
               ||  ||||| | ||  |  |    |     ||    |   | || |   |
sj05061   4065 CTAGGATTACAGGCATGAGCCACCTCGCCCAGCCTATAATTCTTTAGCAT 4114

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
mbg20018  5376 TAGCTTTTTGAGTTCTTTGTAGATTCTGGATACTCTGATTTTGACACTTA 5425
                |  |   ||  |||||| |  |||||  |  |  |   ||| |  ||| 
sj05061   4115 CATATGCCTGTCTTCTTTTTCAATTCTTAAAGCCTTTTATTTTAGTCTT. 4163

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
mbg20018  5426 AATCTAGGCCATTGGTTGTTAGTTTGTATTAGATTAGTCCTTAGCCTAGG 5475
                   |    |||||| ||  |   || | || |||| |    ||     |
sj05061   4164 ....TTTTGCATTGGCTG..AAAATGCAATATATTATTGAAAAGAAGCAG 4207

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
mbg20018  5476 TTGACTAATGCGTTTTCTTGATAAAACTTGAATTATGCATTTTTGGCAGG 5525
               |    ||  ||    |||    |    |   |||    ||| |||     
sj05061   4208 T....TACAGCAGGCTCTAAGGATGTTTCTGATTCCTTATTCTTG..... 4248

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
mbg20018  5526 AATATCATAGAAATGGTGCTGTGTTATGTTTTCAGACCCTATTGGGTGAT 5575
               | | | |  |||||  |  |  ||| ||        || ||  | |||||
sj05061   4249 ATTTTAAAGGAAATAATTTTAAGTTTTG........CCATAGAGTGTGAT 4290

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
mbg20018  5576 GTAAAATTTCAGTGTACGCTGTCAGTTTGCAACTCTGGTTAGTGAGCTAA 5625
               ||    | |                                         
sj05061   4291 GTTTGCTGT......................................... 4299

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
mbg20018  5626 GACAAGCACCTGCCTAGTCCTCTCCAGTCACTATGAACTTTTCATTCCCG 5675
                                                | |   |||  ||||| 
sj05061   4300 .................................TAAGAGTTTTTTTCCCC 4316

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
mbg20018  5676 TCTTTATAACTTACATAAAGATATTTTTGAAACCCCCTAGGTATTAGATG 5725
               | |  ||| |||  ||   | || ||| |  ||||| |  ||  ||| | 
sj05061   4317 TATAAATACCTTTTATTGGGCTA.TTTAGTTACCCCTTCAGTCCTAGCTT 4365

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
mbg20018  5726 TCTCAACAAAATCTCAATGTGGATCTCATGAGACAGAGCAGTGGGTAAAG 5775
                || |   |  |                                      
sj05061   4366 GCTTAGAGATGT...................................... 4377

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
mbg20018  5776 AACCTCAGTTGCCACCAGGGCCTGAGAACCTTAGGTGGATCCCTGGGACC 5825
                                                                 
sj05061   4378 .................................................. 4378

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
mbg20018  5826 CACACTGCAGAAAGAAAAAGTTGACTCCTAGAAGCTGTTCTTAATACAGT 5875
                      |||||| ||||   ||| |       | |||   ||      |
sj05061   4378 ......TCAGAAAAAAAACTATGAATGACTTTGGATGTATATA......T 4415

          6001 ----+----*----+----*----+----*----+----*----+----* 6050
mbg20018  5876 GCCCTAATCTATGAATGCTTTCCCTCCAAATAAATGTTACTTTTCTTCAA 5925
               || ||          |  ||| ||| | ||||    | |  | ||||   
sj05061   4416 GCTCT..........TTATTTACCTGCTAATATGATTAAAATGTCTT... 4452

          6051 ----+----*----+-- 6067
mbg20018  5926 TAAAGATTTCTTTTTTT 5942
                    ||||  | | | 
sj05061   4453 .....ATTTACTCTGT. 4463