##################################
# NO CUT ENZYMES (   70 enzymes) #
##################################

AatII       Acc65I      AccIII      AclI        AflII       
AgeI        Aor51HI     ApaI        AseI        AsnI        
Asp718I     AviII       AvrII       BbeI        BcgI        
BfrI        BglI        BlnI        BseAI       BsiEI       
BsiWI       BsmI        BspEI       BsrBI       Bst1107I    
BstBI       BstEII      BstPI       BstZ17I     CpoI        
DrdI        EagI        EclXI       Eco47III    Eco52I      
EcoO65I     FseI        FspI        KasI        KpnI        
MfeI        MluI        MroI        MunI        NarI        
NdeI        NotI        NspV        PacI        PflMI       
PinAI       PmeI        PshBI       Psp1406I    PvuI        
RsrII       SalI        SbfI        ScaI        SexAI       
SfiI        SfoI        SfuI        SmaI        SpeI        
Sse8387I    SwaI        Van91I      XmaCI       XmaI        


###################################
# ONE CUT ENZYMES (   45 enzymes) #
###################################

AcyI         2275  GACGCC               G[GA]^CG[CT]C
AhdI         3790  GACTGCCTGTC          GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC
AscI          138  GGCGCGCC             GG^CGCGCC
AspEI        3790  GACTGCCTGTC          GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC
AspI          309  GACCAAGTC            GAC[ACGT]^[ACGT][ACGT]GTC
BalI         3198  TGGCCA               TGG^CCA
BamHI        3741  GGATCC               G^GATCC
BbvCI        2309  GCTGAGG              CCTCAGC(-5/-2)
BciVI        1000  GTATCC               GTATCC(6/5)
BclI         3147  TGATCA               T^GATCA
BsaBI         893  GATTAACATC           GAT[ACGT][ACGT]^[ACGT][ACGT]ATC
BsaHI        2275  GACGCC               G[GA]^CG[CT]C
BsaI         2209  GGTCTC               GGTCTC(1/5)
BsaWI           6  ACCGGA               [AT]^CCGG[AT]
BspDI        3682  ATCGAT               AT^CGAT
BspLU11I     4557  ACATGT               A^CATGT
BssHII        139  GCGCGC               G^CGCGC
BssSI        1182  CACGAG               CACGAG(-5/-1)
BstXI        1672  CCACGCTGGTGG         CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG
ClaI         3682  ATCGAT               AT^CGAT
EaeI         3198  TGGCCA               [CT]^GGCC[GA]
Eam1105I     3790  GACTGCCTGTC          GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC
EcoNI        1652  CCTTGGACAGG          CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG
EcoRV        4585  GATATC               GAT^ATC
EcoT22I       395  ATGCAT               ATGCA^T
FbaI         3147  TGATCA               T^GATCA
Hin1I        2275  GACGCC               G[GA]^CG[CT]C
HindIII      3416  AAGCTT               A^AGCTT
KspI         4338  CCGCGG               CCGC^GG
MamI          893  GATTAACATC           GAT[ACGT][ACGT]^[ACGT][ACGT]ATC
MluNI        3198  TGGCCA               TGG^CCA
MscI         3198  TGGCCA               TGG^CCA
NruI          709  TCGCGA               TCG^CGA
NsiI          395  ATGCAT               ATGCA^T
PflFI         309  GACCAAGTC            GAC[ACGT]^[ACGT][ACGT]GTC
PshAI        3273  GACTGTAGTC           GAC[ACGT][ACGT]^[ACGT][ACGT]GTC
PstI         1664  CTGCAG               CTGCA^G
SacII        4338  CCGCGG               CCGC^GG
SapI          726  GAAGAGC              GCTCTTC(1/4)
SgrAI          13  CGCCGGCG             C[GA]^CCGG[CT]G
SnaBI        3904  TACGTA               TAC^GTA
SphI         3647  GCATGC               GCATG^C
SspI         3554  AATATT               AAT^ATT
Tth111I       309  GACCAAGTC            GAC[ACGT]^[ACGT][ACGT]GTC
XbaI         1717  TCTAGA               T^CTAGA


###################################
# TWO CUT ENZYMES (   24 enzymes) #
###################################

Alw44I        290  GTGCAC               G^TGCAC
             3238  GTGCAC              
ApaLI         290  GTGCAC               G^TGCAC
             3238  GTGCAC              
Asp700I      1584  GAAGATGTTC           GAA[ACGT][ACGT]^[ACGT][ACGT]TTC
             3595  GAAACACTTC          
BanI         2497  GGTGCC               G^G[CT][GA]CC
             3474  GGTGCC              
BglII        3107  AGATCT               A^GATCT
             3661  AGATCT              
BsmBI         438  GAGACG               CGTCTC(1/5)
              778  GAGACG              
BspHI        2885  TCATGA               T^CATGA
             3778  TCATGA              
BsrDI        4299  CATTGC               GCAATG(2/0)
             3390  GCAATG              
BsrFI          14  GCCGGC               [GA]^CCGG[CT]
              115  GCCGGC              
Cfr10I         14  GCCGGC               [GA]^CCGG[CT]
              115  GCCGGC              
DraI         3563  TTTAAA               TTT^AAA
             4637  TTTAAA              
DraIII       2702  CACAATGTG            CAC[ACGT][ACGT][ACGT]^GTG
             4645  CACCAAGTG           
EcoRI         786  GAATTC               G^AATTC
             4445  GAATTC              
HpaI         1739  GTTAAC               GTT^AAC
             2375  GTTAAC              
NaeI           14  GCCGGC               GCC^GGC
              115  GCCGGC              
NcoI         1276  CCATGG               C^CATGG
             4275  CCATGG              
NgoMIV         14  GCCGGC               G^CCGGC
              115  GCCGGC              
NheI         3828  GCTAGC               G^CTAGC
             3958  GCTAGC              
PaeR7I        175  CTCGAG               C^TCGAG
             4304  CTCGAG              
RcaI         2885  TCATGA               T^CATGA
             3778  TCATGA              
StuI         1265  AGGCCT               AGG^CCT
             1820  AGGCCT              
XcmI         1243  CCATGCTGGAGTTGG      CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG
             1883  CCAGCTCTGCTCTGG     
XhoI          175  CTCGAG               C^TCGAG
             4304  CTCGAG              
XmnI         1584  GAAGATGTTC           GAA[ACGT][ACGT]^[ACGT][ACGT]TTC
             3595  GAAACACTTC          


#########################################
# 3 OR MORE CUT ENZYMES (  119 enzymes) #
#########################################

AccI        AccII       AciI        AcsI        AfaI        
AflIII      AluI        AlwI        AlwNI       AocI        
ApoI        AspHI       AvaI        AvaII       BanII       
BbrPI       BbsI        BbvI        BcnI        BfaI        
BlpI        BmyI        BpmI        Bpu1102I    BpuAI       
BsaAI       BsaJI       BseRI       BsgI        BsiHKAI     
BsiYI       BslI        BsmAI       BsmFI       BsoBI       
Bsp1286I    Bsp1407I    BspMI       BsrGI       BsrI        
BssKI       BstAPI      BstF5I      BstNI       BstUI       
BstYI       Bsu36I      Cac8I       CelII       CfoI        
Cfr13I      DdeI        DpnII       DraII       DsaI        
EarI        Eco81I      EcoO109I    EcoRII      EcoT14I     
FauI        Fnu4HI      FokI        HaeII       HaeIII      
HapII       HgaI        HhaI        HinP1I      HincII      
HindII      HinfI       HpaII       HphI        ItaI        
Ksp632I     MaeI        MaeII       MaeIII      MboI        
MboII       MflI        MnlI        MseI        MslI        
MspA1I      MspI        MvaI        MvnI        MwoI        
NciI        NdeII       NlaIII      NlaIV       NspI        
PleI        PmaCI       PmlI        PpuMI       PvuII       
RsaI        SacI        Sau3AI      Sau96I      ScrFI       
SfaNI       SfcI        SmlI        SspBI       StyI        
TaqI        TfiI        Tru9I       TseI        Tsp45I      
Tsp509I     TspRI       TthHB8I     XhoII