FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1427.ptfa, 443 aa vs ./tmplib.26680 library 1768574 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.3846+/-0.00459; mu= 12.2542+/- 0.306 mean_var=122.6538+/-28.364, 0's: 0 Z-trim: 8 B-trim: 0 in 0/36 Lambda= 0.1158 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4194 ( 320 res) mbg12940 ( 320) 486 92 6.6e-20 mKIAA0080 ( 353 res) mbh01670 ( 353) 408 79 5.9e-16 mKIAA1342 ( 499 res) mid23032 ( 499) 397 77 2.6e-15 mKIAA0985 ( 684 res) mbp05185 ( 684) 223 48 1.8e-06 >>mKIAA4194 ( 320 res) mbg12940 (320 aa) initn: 480 init1: 250 opt: 486 Z-score: 449.7 bits: 91.9 E(): 6.6e-20 Smith-Waterman score: 486; 31.835% identity (32.567% ungapped) in 267 aa overlap (178-441:43-306) 150 160 170 180 190 200 mKIAA1 SIRPQNGVVEDVCVMETWNPEKAASWNQAPKLHFRLDYDQKKAELFVTSLEAV---TSDH ::.: :::: . .: : :.:. . : mKIAA4 KGGQDDDDAETGLTEGEGEGEEEKEPENLGKLQFSLDYDFQANQLTVGVLQAAELPALDM 20 30 40 50 60 70 210 220 230 240 250 260 mKIAA1 EGGCDCYIQGSVAVKTGSVEAQTALKKRQLHTTWEEGLALPLGEEELPTATLTLTLRTCD : : :.. . . . .: .... :. ...: ... . .:: ::.... : mKIAA4 GGTSDPYVK-VFLLPDKKKKYETKVHRKTLNPAFNETFTFKVPYQELGGKTLVMAIYDFD 80 90 100 110 120 130 270 280 290 300 310 320 mKIAA1 RFSRHSVIGELRLGLDGASVPLGAAQWGELKTTAKEPSAGAGEVLLSISYLPAANRLLVV :::.:..:::... .. ... .: .:. :: :.. :. :.:.:..: : mKIAA4 RFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLTVC 140 150 160 170 180 190 330 340 350 360 370 380 mKIAA1 LIKAKNLHSNQSKELLGKDVSVKVTLKHQAQKLKKKQTKRAKHKINPVWNEMIMFELPDD ...::::.. . : .: ::. : .....::::.: :. .:: .:: . ::.: . mKIAA4 ILEAKNLKKMDVGGL--SDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFE 200 210 220 230 240 390 400 410 420 430 440 mKIAA1 LLRASSVELEVLGQGEEGPSCELGHCSLGLHASGSERSHWEEMLKNPRRQIAMWHQLHL .. .: . :: . : . .:. .: .:.:.: :: .:: :::: ::.::.:. mKIAA4 QIQKVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPE 250 260 270 280 290 300 mKIAA4 EEVDALLGKNK 310 320 >>mKIAA0080 ( 353 res) mbh01670 (353 aa) initn: 362 init1: 154 opt: 408 Z-score: 378.8 bits: 78.9 E(): 5.9e-16 Smith-Waterman score: 408; 28.732% identity (30.357% ungapped) in 355 aa overlap (98-441:4-350) 70 80 90 100 110 120 mKIAA1 ARPGVLQAAQQFNIKKSTEPVQPRPLLKFPDIYGPRPAVTAPEVINYADYTLGTTEESAA : ::: ... :. : . ... mKIAA0 VRRDKDGPRRESGRGNLLINAESGLLSHDKDPR 10 20 30 130 140 150 160 170 180 mKIAA1 PASPQAQSDSR-LKRQVTEELSIRPQNGVVE-DVCVMETWNPEKAASWNQAPKLHFRLDY :: . :. .::. ::: :..... . . .::. . .. : : .:: mKIAA0 GPSPASCMDQLPIKRDYGEELR-SPMTSLTPGESKATSPSSPEEDVMLGS---LTFSVDY 40 50 60 70 80 190 200 210 220 230 240 mKIAA1 DQKKAELFVTSLEA----VTSDHEGGCDCYIQGSVAVKTGSVEAQTALKKRQLHTTWEEG . : : :: :: : .:. : : ::. .. . ...: . .. : ...: mKIAA0 NFPKKALVVTIQEAHGLPVMDDQTQGSDPYIKMTI-LPDKRHRVKTRVLRKTLDPVFDET 90 100 110 120 130 140 250 260 270 280 290 mKIAA1 LALP-LGEEELPTATLTLTLRTCDRFSRHSVIGELRLGLDGASVPLGAAQWG-ELKTTAK ... . .: .: . . . ::::: .::::. . : :.. : .: .. mKIAA0 FTFYVIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQLTRDIIKRNI 150 160 170 180 190 200 300 310 320 330 340 350 mKIAA1 EPSAGAGEVLLSISYLPAANRLLVVLIKAKNLHSNQSKELLGKDVSVKVTLKHQAQKLKK . . ::. .:.:: :.:.:. ::..::..: . . : :. :::.. . ... : mKIAA0 QKCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGNPY-VKVNVYYGRKRIAK 210 220 230 240 250 260 360 370 380 390 400 410 mKIAA1 KQTKRAKHKINPVWNEMIMFELPDDLLRASSVELEVLGQGEEGPSCELGHCSLGLHA--- :.:. : .:::.:: .....: ::: :.:. :. . . .:. :: :. mKIAA0 KKTHVKKCTLNPVFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNEVVGRLILGAHSVTT 270 280 290 300 310 320 420 430 440 mKIAA1 SGSERSHWEEMLKNPRRQIAMWHQLHL ::.: ::.:. ..::. :: ::.: mKIAA0 SGAE--HWREVCESPRKPIAKWHSLSEY 330 340 350 >>mKIAA1342 ( 499 res) mid23032 (499 aa) initn: 367 init1: 226 opt: 397 Z-score: 367.2 bits: 77.3 E(): 2.6e-15 Smith-Waterman score: 397; 30.218% identity (31.596% ungapped) in 321 aa overlap (129-441:182-496) 100 110 120 130 140 150 mKIAA1 IYGPRPAVTAPEVINYADYTLGTTEESAAPASPQAQSDSRLKRQVTEELSIRPQNGVVED :.:.: :.: :. .:: .: . .. . mKIAA1 KSEVKGKAALPNLSLHLDLEKRDLNGNFPKANPKAGSSSDLE-NVTPKLFTETEKEANSP 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA1 VCVMETWNPEKAASWNQAPKLHFRLDYDQKKAELFVTSLEA----VTSDHEGGCDCYIQG . . . . . .. : . :.:. .: . :. :: . ... : ::. mKIAA1 ESLKSSTSLTSEEKQEKLGTLFLSLEYNFEKKAFVVNIKEAQGLPAMDEQSMTSDPYIKM 220 230 240 250 260 270 220 230 240 250 260 270 mKIAA1 SVAVKTGSVEAQTALKKRQLHTTWEEGLAL-PLGEEELPTATLTLTLRTCDRFSRHSVIG .. . . ...: . .. : ...: ... . .. .: .:. . ::::: .::: mKIAA1 TI-LPEKKHRVKTRVLRKTLDPVFDETFTFYGIPYPHIQELSLHFTVLSFDRFSRDDVIG 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 ELRLGLDGASVPLGAAQWGE--LKTTAKEPSAGAGEVLLSISYLPAANRLLVVLIKAKNL :. . :.: . : . .: .::. :.: ::.:.:. : ..: : ::..::..: mKIAA1 EVLIPLSGIELSDGKMLMTREIIKRNAKK-SSGRGELLVSLCYQSTTNTLTVVVLKARHL 330 340 350 360 370 380 340 350 360 370 380 390 mKIAA1 HSNQSKELLGKDVSVKVTLKHQAQKLKKKQTKRAKHKINPVWNEMIMFELPDDLLRASSV ... . : .: :::.: : ....::.:. : : :.::...:..: . :. :: mKIAA1 PKSDVSGL--SDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISV 390 400 410 420 430 440 400 410 420 430 440 mKIAA1 ELEVLGQGEEGPSCE-LGHCSLGLHASGSERSHWEEMLKNPRRQIAMWHQLHL :. :: ..:.: : .:. :: : :: .::.:. :::::: ::.: mKIAA1 EFLVL-DSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHMLCDG 450 460 470 480 490 >>mKIAA0985 ( 684 res) mbp05185 (684 aa) initn: 300 init1: 189 opt: 223 Z-score: 208.6 bits: 48.4 E(): 1.8e-06 Smith-Waterman score: 289; 24.112% identity (27.299% ungapped) in 394 aa overlap (86-442:292-676) 60 70 80 90 100 110 mKIAA1 LLPRDREPDPEKARPGVLQAAQQFNIKKSTEPVQPRP-----LLKFPDIYGPRPAVTAPE .:::: : : . . . . : mKIAA0 TSRSPAGLRRANSVQAARPAPAPVPSPAPPQPVQPGPPGGSRATPGPGRFPEQSTEAPPS 270 280 290 300 310 320 120 130 140 150 160 170 mKIAA1 VINYADYTLGTTEESAAPASPQAQSDSRLKRQVTEELSIRPQNGVVEDVCVMETWNPEKA .: . . :: ..::. :. . .. : . :. .... ..: mKIAA0 DPGYPGAVAPAREERTGPAGG-FQAAPHTAAPYSQAAPARQPPPAEEEEEEANSYDSDEA 330 340 350 360 370 380 180 190 200 210 220 mKIAA1 ASWNQAPKLHFRLDYDQKKAELFVTSLEAV---TSDHEGGCDCYIQGSV---AVKTGSVE .. . :.: : ::: ...: : ..: : .: : :.. . : :..... mKIAA0 TTLGA---LEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLR 390 400 410 420 430 230 240 250 260 270 280 mKIAA1 AQTALKKRQLHTTWEEGLALP-LGEEELPTATLTLTLRTCDRFSRHSVIGELRLGLDGAS ..: . : . .:.: : . ::.. :: ... :.:... ::: :..: . mKIAA0 TKTLRNTR--NPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLK 440 450 460 470 480 490 290 300 310 mKIAA1 --------------VPL------GAAQWGELKTTAKEPSAGA----GEVLLSISYLPAAN .:. :.:. : . : :..:.:. : . mKIAA0 ANQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQG 500 510 520 530 540 550 320 330 340 350 360 370 mKIAA1 RLLVVLIKAKNLHSNQSKELLGKDVSVKVTLKHQAQKLKKKQTKRAKHKINPVWNEMIMF :.: .:. .: . ... .: ::. :: . : :..:. :. .:: .:: ... mKIAA0 GLIVGIIRCVHLAAMDANGY--SDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFY 560 570 580 590 600 610 380 390 400 410 420 430 mKIAA1 ELPDDLLRASSVELEVLGQGEEGPSCE-LGHCSLGLHASGSERSHWEEMLKNPRRQIAMW .. . : .:... : . : : . .: :.::. :.: . .:: : ::: ..: : mKIAA0 DIKHSDLAKKSLDISVWDY-DIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERW 620 630 640 650 660 670 440 mKIAA1 HQLHL :::. mKIAA0 HQLQNENHVSSD 680 443 residues in 1 query sequences 1768574 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:44:32 2006 done: Mon Mar 27 10:44:33 2006 Scan time: 0.660 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]