FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1079.ptfa, 1062 aa vs ./tmplib.26680 library 1767955 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.3721+/-0.00605; mu= 2.1453+/- 0.403 mean_var=210.9763+/-49.967, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.0883 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0641 ( 1415 res) mbg11644 (1415) 443 70 3.2e-12 >>mKIAA0641 ( 1415 res) mbg11644 (1415 aa) initn: 696 init1: 181 opt: 443 Z-score: 311.7 bits: 69.8 E(): 3.2e-12 Smith-Waterman score: 813; 28.161% identity (35.440% ungapped) in 1115 aa overlap (9-1059:458-1407) 10 20 30 mKIAA1 RMQSQRDSEVDFEQQWTALKPDTNSRDASSSAA----- : .::..: .:.: .. .:.::: mKIAA0 FCWLQPEQRPTAEEVHLLLSYLCAKGTTELEEEFERRWRSLRPGGSTGLGSGSAAPAAAT 430 440 450 460 470 480 40 50 60 70 80 mKIAA1 -----------FPILDHFARDRLGREMEEVLTVTETSQGLSFEYVWEAAKHDHFDEQGRG ::.:..:. : . . ..::::::::.::.::: ::: : : mKIAA0 AASAELTAASSFPLLERFTSDGFHVDSDDVLTVTETSHGLNFEYKWEA---------GCG 490 500 510 520 530 90 100 110 120 130 140 mKIAA1 HPDEALSYSSMFFPVEVFENSLSDPGPGKQDDSGQEVPVRAPGVVPVFDAHNLSVGSDYY . .: .. :.:: . . . ::::::..::. ::::.:. mKIAA0 AEE---------YPPS---GAASSPGSAARLQELCAPDSSPPGVVPVLSAHSPSVGSEYF 540 550 560 570 580 150 160 170 180 190 mKIAA1 IQLEEKSSSNLGLDP--------PALLTTEVDKLERAGAEEPRTEEDFFQSSAHPKEAS- :.:: . : :: : .: . .. :.. . : . . : : :. mKIAA0 IRLEGAVPAA-GHDPDCAGCAPSPQAVTDQDNNSEESTVASLAMEP--LLGHAPPTEGLW 590 600 610 620 630 640 200 210 220 230 240 250 mKIAA1 STEDSRATSIPGSPFNLFSDLDKADDLPSHQKIFDLMELNGVQADFKPAILSSSLD-DPK . : .. ::: : . ::... .: :: : : : .... : .:. mKIAA0 GPCDHHSHRRQGSPCPSRSPSPGTPMLPAED--IDW----GV-ATFCPPFFDDPLGASPS 650 660 670 680 690 260 270 280 290 300 310 mKIAA1 DTCQSDKEKPHKLLDQGPLCLSESLLHQDHFDPLSVQELSENFLFLQEKNLLKGSLTTKE . .. . ..: . :. . : . : . ..: . .. : mKIAA0 GSPGAQPSPSDEEPEEGKVGLAAQCGHWS-----SNMSANNNSASRDPESWDPG------ 700 710 720 730 740 320 330 340 350 360 370 mKIAA1 QVSDLQTELKNAGFTSALLESPQRGSESSELEFLENTLDF-PLSQGDTRGQNEGAGVRR- ::.. .. :.: ..:. . : ..: :. :: : . . ::. . mKIAA0 YVSSFTDSYRDD--CSSLEQTPRASPEVGHLLSQEDPRDFLPGLVAVSPGQEPSRPFNLL 750 760 770 780 790 800 380 390 400 410 420 mKIAA1 ----HSGTSPQASPALLTE---EGSPTAPTDPILKP---EETKSFRDVRVPEDSICLELG .: .: : :.: ::. . .::..: .:... . ..: :. mKIAA0 PLCPAKGLAPAAC--LITSPWTEGAVGGAENPIVEPKLAQEAEGSAEPQLPLPSV----- 810 820 830 840 850 430 440 450 460 470 480 mKIAA1 PDPVTVGVEIPATDAKTLDGGNRPPDVTCQSKEALSLTNRHPILVNDITAQGSVESCLPE :.: :. .:. .:.. ::. : : : :: . .:: mKIAA0 PSPSCEGASLPSEEASA-------PDILPASPT--------P-------AAGSWVT-VPE 860 870 880 890 490 500 510 520 530 mKIAA1 SRQDLQNEPFSEDPLSVSSLEKHSEAAETLNQLNSKAAPEDAALA-SALSSDSTSQDSLL :.. : ::: ... ..: ::.. : :.. .: .:. mKIAA0 PAPTLES--------SGSSLGQEAPSSED----------EDTTEATSGVFTDLSSDGPHT 900 910 920 930 540 550 560 570 580 590 mKIAA1 EDSLSTPIPTSEQS-VETPDSLDSVDVREALLESLGSH--TPRKLLPPD---KPADSGYE : : .: : :. : :::::::.:. . .. : . .: :: . .::::. mKIAA0 EKSGIVPALRSLQKQVGTPDSLDSLDIPSSASDG-GCEVLSPSAAGPPGGQPRAVDSGYD 940 950 960 970 980 990 600 610 620 630 640 650 mKIAA1 TENLESPEWTLHPAPEGTADSDAAAAGDSGHSSLPPNPVIVISDAGDGHRGAEGPPQSFT ::: ::::..:. : :.. . .. :.: :.:.. .: .: mKIAA0 TENYESPEFVLKEAHESSEPEAFGEPASEGESP-GPDPLLSVSLGG-------------- 1000 1010 1020 1030 660 670 680 690 700 710 mKIAA1 LGPQSSYRDSAYFSDND--SEPDKKPEEVPGTSANALVLVKGQSPPESVVPEESSDVREG :. .: ::::::::: : ::: ::. : . . .. .:.: mKIAA0 LSKKSPYRDSAYFSDLDAESEPTFGPEKHSGIQDS----------------QKEQDLR-- 1040 1050 1060 1070 1080 720 730 740 750 760 770 mKIAA1 CLEAPQDKPDQSRVSTLQNSCHSELQETLQPTPADASRESCPVNDEASSPLSLLNSEPSS .: . : .. :... : : .:.: .: . :.: : :. : : . : . mKIAA0 ---SPPS-PGHQSVQAFPRSAVS--SEVL--SPPQQSEEPLP---EVPRPEPLGAQGPVG 1090 1100 1110 1120 1130 780 790 800 810 820 mKIAA1 CDDLDTQEDRPC-TLASTGTNTNELLAYMSSTLDKSLPSHLESSKLKEPDIEGKYLGK-- . . : :.:. :.. :.: .. :: :.. .. .. . . mKIAA0 VQPVPGPSHSKCFPLTSV-----PLISEGSGTEPQG-PSGQLSGRAQQGQMGNPSTPRSP 1140 1150 1160 1170 1180 830 840 850 860 870 880 mKIAA1 LCVS--GMLDLSEDGMDADEEDENSDDSDEDLRAFNLHSLSSESEDDTEHP--VPIIVS- ::.. : : . ::. :.:..:::.:: . :.. :::. :.: ::..:. mKIAA0 LCLALPGHPGALEGRPEEDEDTEDSEESDEELRCY---SVQEPSEDSEEEPPAVPVVVAE 1190 1200 1210 1220 1230 1240 890 900 910 920 930 940 mKIAA1 NDDGRHLRSLLK-PSAAEAIEQLPEDWKKEKKAVTFFDDVTVYLFDQETPTKELGHC--G ....:.:::::: :: : . .: ...::::.:::::::::::::.::.: :. . mKIAA0 SQSARNLRSLLKMPSLLS--EAFCDDLERKKKAVSFFDDVTVYLFDQESPTRETGEPFPS 1250 1260 1270 1280 1290 950 960 970 980 990 mKIAA1 GEAHGP-----GPSSPAASSSSPYLGRCMNSESSTDEEGGGFEWDDDFSPDPFMSK-TTS . : :::::.:.. :. . .::. : :. :::: :: : . .: mKIAA0 TKESLPTFLEGGPSSPSATGLPLRAGH--SPDSSAPEPGSRFEWDGDFPLVPGKAALVTE 1300 1310 1320 1330 1340 1350 1000 1010 1020 1030 1040 1050 mKIAA1 LLGSKPSLQTSKYFSPPPPARSAEQSWPHVSPCSRFSISPANIASFSLTHLTDSDIEQGG : . : : .:: :: .: :::..::. . ::.::..::: .. : mKIAA0 LDPADPVLA-----APPTPA----------APFSRFTVSPTPASRFSITHISDSDAQSVG 1360 1370 1380 1390 1400 1060 mKIAA1 SSEDGDKD . : mKIAA0 GPAAGAGGRYTEA 1410 1062 residues in 1 query sequences 1767955 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:35:34 2006 done: Mon Mar 27 10:35:35 2006 Scan time: 1.080 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]