# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg18024.fasta.nr -Q ../query/mKIAA0250.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0250, 1157 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7901352 sequences
Expectation_n fit: rho(ln(x))= 6.5218+/-0.000208; mu= 9.0401+/- 0.012
mean_var=140.1526+/-26.842, 0's: 38 Z-trim: 111 B-trim: 442 in 1/65
Lambda= 0.108336
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 39, opt: 27, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|81889396|sp|Q5RJH6.1|SMG7_MOUSE RecName: Full=P (1138) 7635 1205.9 0
gi|109498024|ref|XP_341133.3| PREDICTED: similar t (1264) 7536 1190.5 0
gi|119611562|gb|EAW91156.1| Smg-7 homolog, nonsens (1141) 7388 1167.3 0
gi|56204520|emb|CAI19478.1| Smg-7 homolog, nonsens (1099) 7177 1134.3 0
gi|109019248|ref|XP_001109289.1| PREDICTED: simila (1447) 7146 1129.6 0
gi|119611565|gb|EAW91159.1| Smg-7 homolog, nonsens (1266) 7130 1127.0 0
gi|45708765|gb|AAH36381.1| SMG7 protein [Homo sapi (1178) 7120 1125.4 0
gi|42476070|ref|NP_963862.1| SMG-7 homolog isoform (1091) 5606 888.8 0
gi|168267238|dbj|BAG09675.1| Smg-7 homolog, nonsen (1091) 5605 888.6 0
gi|194210398|ref|XP_001489684.2| PREDICTED: Smg-7 (1091) 5593 886.7 0
gi|194674279|ref|XP_877580.3| PREDICTED: similar t (1091) 5508 873.4 0
gi|73961139|ref|XP_537157.2| PREDICTED: similar to (1072) 5506 873.1 0
gi|42476066|ref|NP_963863.1| SMG-7 homolog isoform (1049) 5395 855.8 0
gi|194386256|dbj|BAG59692.1| unnamed protein produ ( 828) 5266 835.5 0
gi|52350667|gb|AAH82789.1| Smg-7 homolog, nonsense (1134) 5207 826.4 0
gi|16550923|dbj|BAB71079.1| unnamed protein produc ( 799) 5117 812.2 0
gi|84028262|sp|Q92540.2|SMG7_HUMAN RecName: Full=P (1137) 5084 807.2 0
gi|27372208|dbj|BAC53621.1| SMG-7 [Homo sapiens] (1137) 5077 806.1 0
gi|126306510|ref|XP_001375451.1| PREDICTED: simila (1176) 4989 792.4 0
gi|149636347|ref|XP_001516046.1| PREDICTED: simila (1166) 4929 783.0 0
gi|56204519|emb|CAI19477.1| Smg-7 homolog, nonsens ( 757) 4906 779.2 0
gi|21749856|dbj|BAC03672.1| unnamed protein produc ( 757) 4901 778.4 0
gi|224057006|ref|XP_002191574.1| PREDICTED: Smg-7 (1198) 4809 764.2 0
gi|118094232|ref|XP_422287.2| PREDICTED: similar t (1122) 4785 760.4 1.2e-216
gi|39645381|gb|AAH63908.1| Smg-7 homolog, nonsense (1142) 4074 649.3 3.6e-183
gi|30962840|gb|AAH52565.1| SMG7 protein [Homo sapi ( 839) 4030 642.3 3.4e-181
gi|194387622|dbj|BAG61224.1| unnamed protein produ (1145) 3835 612.0 6.3e-172
gi|114568360|ref|XP_514048.2| PREDICTED: SMG-7 hom (1195) 3835 612.0 6.5e-172
gi|119611563|gb|EAW91157.1| Smg-7 homolog, nonsens (1107) 3668 585.9 4.4e-164
gi|27372209|dbj|BAC53622.1| SMG-7 transcript varia (1071) 3654 583.7 2e-163
gi|94734435|emb|CAK05285.1| novel protein similar (1130) 3389 542.3 6e-151
gi|190339636|gb|AAI62970.1| Smg-7 homolog, nonsens (1130) 3387 541.9 7.5e-151
gi|62738622|pdb|1YA0|A Chain A, Crystal Structure ( 497) 3167 507.2 9.4e-141
gi|49522237|gb|AAH75200.1| MGC83433 protein [Xenop (1129) 2986 479.3 5.5e-132
gi|148707502|gb|EDL39449.1| Smg-7 homolog, nonsens (1009) 2222 359.8 4.5e-96
gi|149058398|gb|EDM09555.1| Smg-7 homolog, nonsens (1004) 2190 354.8 1.4e-94
gi|38607488|gb|AAR25620.1| breast cancer-associate ( 802) 2053 333.3 3.4e-88
gi|47211089|emb|CAF89906.1| unnamed protein produc (1107) 1802 294.2 2.8e-76
gi|210108409|gb|EEA56310.1| hypothetical protein B (1143) 1770 289.2 9e-75
gi|74219214|dbj|BAE26742.1| unnamed protein produc ( 417) 1572 257.8 9.2e-66
gi|156543150|ref|XP_001605792.1| PREDICTED: hypoth (1247) 1229 204.7 2.7e-49
gi|110771190|ref|XP_393064.3| PREDICTED: similar t (1132) 1199 200.0 6.6e-48
gi|189234994|ref|XP_969025.2| PREDICTED: similar t ( 848) 1152 192.5 8.7e-46
gi|212509540|gb|EEB12909.1| smg-7, putative [Pedic (1149) 1141 190.9 3.6e-45
gi|126310877|ref|XP_001379370.1| PREDICTED: simila ( 176) 1025 172.0 2.7e-40
gi|55959798|emb|CAI16626.1| Smg-7 homolog, nonsens ( 170) 994 167.1 7.6e-39
gi|156213356|gb|EDO34379.1| predicted protein [Nem ( 536) 1001 168.7 8e-39
gi|19571759|emb|CAD27801.1| Y_250 [Tetraodon nigro ( 782) 952 161.2 2.1e-36
gi|210101658|gb|EEA49720.1| hypothetical protein B ( 291) 943 159.4 2.8e-36
gi|198425798|ref|XP_002126988.1| PREDICTED: simila ( 251) 940 158.9 3.5e-36
>>gi|81889396|sp|Q5RJH6.1|SMG7_MOUSE RecName: Full=Prote (1138 aa)
initn: 7634 init1: 7634 opt: 7635 Z-score: 6452.8 bits: 1205.9 E(): 0
Smith-Waterman score: 7635; 99.472% identity (99.824% similar) in 1136 aa overlap (23-1157:3-1138)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .:::::::::::::::::::::::::::::::
gi|818 MSLQSAQYLRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQESNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 ILCKCPLQNDSQESNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFH
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 PREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 PREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLIS
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 IGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 IGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGSP
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 GLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVNQGRSFPPKEVKSQTELRKTPVSEA
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
gi|818 GLKSVLSTGRNPSNSCDSGEKPVVTFKENIKPREVNQGRSFPPKEVKSQTELRKTPVSEA
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 RKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 RKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGV
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 SVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTSLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTSLPA
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 QPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQVQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 QPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQVQSP
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 LGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKVPEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 LGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKVPEF
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 YWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 YWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKS
830 840 850 860 870 880
900 910 920 930 940 950
mKIAA0 LAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 LAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSV
890 900 910 920 930 940
960 970 980 990 1000 1010
mKIAA0 NQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDHSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 NQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDHSTP
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
mKIAA0 ASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGFGVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 ASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGFGVD
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
mKIAA0 YLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 YLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLL
1070 1080 1090 1100 1110 1120
1140 1150
mKIAA0 MQQKQKQQRGQGAMNPPH
::::::::::::::::::
gi|818 MQQKQKQQRGQGAMNPPH
1130
>>gi|109498024|ref|XP_341133.3| PREDICTED: similar to SM (1264 aa)
initn: 4709 init1: 3564 opt: 7536 Z-score: 6368.6 bits: 1190.5 E(): 0
Smith-Waterman score: 7536; 96.959% identity (98.871% similar) in 1151 aa overlap (11-1157:114-1264)
10 20 30
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMT
..: :. . . :.:.. .:::::::::::
gi|109 RGGVGGEEDGGGRQHPRGRGAAPRSLKDPRRLRGETRRRRMSLQSAQYLRQAEVLKAEMT
90 100 110 120 130 140
40 50 60 70 80 90
mKIAA0 DSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRA
150 160 170 180 190 200
100 110 120 130 140 150
mKIAA0 NPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.::
gi|109 NPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIV
210 220 230 240 250 260
160 170 180 190 200 210
mKIAA0 KPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 KPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKG
270 280 290 300 310 320
220 230 240 250 260 270
mKIAA0 DHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHV
330 340 350 360 370 380
280 290 300 310 320 330
mKIAA0 YLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 YLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSY
390 400 410 420 430 440
340 350 360 370 380 390
mKIAA0 SQDEQLCWTQLLALFMSFLGILCKCPLQNDSQESNNAYPLPAVKVSMDWLRLRPRVFQEA
:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
gi|109 SQDEQLCWTQLLALFMSFLGILCKCPLQNDSQESYNAYPLPAVKVSMDWLRLRPRVFQEA
450 460 470 480 490 500
400 410 420 430 440 450
mKIAA0 VVDERQYIWPWLISLLNSFHPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQ
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
gi|109 VVDERQYIWPWLISLLNSFHPREDDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQ
510 520 530 540 550 560
460 470 480 490 500 510
mKIAA0 GITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 GITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAK
570 580 590 600 610 620
520 530 540 550 560 570
mKIAA0 ENLILQETSVVESLATDGSPGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QG
:::::::::..:: :.::::::::::::::.::.::::::::::::::::: :::: ::
gi|109 ENLILQETSAIESHASDGSPGLKSVLSTGRSPSTSCDSGEKPVVTFKENIKPREVNRDQG
630 640 650 660 670 680
580 590 600 610 620 630
mKIAA0 RSFPPKEVKSQTELRKTPVSEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|109 RSFPPKEVKSQTELRKTPVSEARKTPVTQTPSQTNNSQFIPIHHPGAFPPLPSRPGFPPP
690 700 710 720 730 740
640 650 660 670 680 690
mKIAA0 TYVIPPPVAFSMGSGYTFPAGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 TYVIPPPVAFSMGSGYTFPAGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPG
750 760 770 780 790 800
700 710 720 730 740 750
mKIAA0 PMNQGPQQSQPPSQPPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PMNQGPQQSQPPSQPPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSG
810 820 830 840 850 860
760 770 780 790 800 810
mKIAA0 FQQYQQADASKQLWNPPQVQSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEK
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
gi|109 FQQYQQADASKQLWNPPQVQSPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVIQQQPLEK
870 880 890 900 910 920
820 830 840 850 860 870
mKIAA0 KMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 KMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDP
930 940 950 960 970 980
880 890 900 910 920 930
mKIAA0 VPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSL
990 1000 1010 1020 1030 1040
940 950 960 970 980 990
mKIAA0 LEKPSELMSHSSSFLSLTGFSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVAS-QETS
:::::::::::::::::::::::::::::::.::::::::::.::::::.::::: ::::
gi|109 LEKPSELMSHSSSFLSLTGFSVNQERYPNSSVFNEVYGKNLTASSKAELSPSVASSQETS
1050 1060 1070 1080 1090 1100
1000 1010 1020 1030 1040 1050
mKIAA0 LYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPD
1110 1120 1130 1140 1150 1160
1060 1070 1080 1090 1100 1110
mKIAA0 NRDRRPADRWKTDKPAMGGFGVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLM
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|109 NRDRRPADRWKTDKPAMGGFGVDYLSATSSSENSWHQASTPSGTWTGHGPSMEDSSAVLM
1170 1180 1190 1200 1210 1220
1120 1130 1140 1150
mKIAA0 ESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
:::::::::::::::::::::::::::::::::::::::::
gi|109 ESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
1230 1240 1250 1260
>>gi|119611562|gb|EAW91156.1| Smg-7 homolog, nonsense me (1141 aa)
initn: 6160 init1: 3896 opt: 7388 Z-score: 6244.2 bits: 1167.3 E(): 0
Smith-Waterman score: 7388; 95.522% identity (98.859% similar) in 1139 aa overlap (23-1157:3-1141)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .::::::::.::::::::::::::::::::::
gi|119 MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
:::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::
gi|119 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|119 AASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|119 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
:::::::::.::: : ::::::::::::::::::::::::::::::::::::::::::::
gi|119 ILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 HPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
::.:.:::. .:::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HPHEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::
gi|119 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGS
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 PGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QGRSFPPKEVKSQTELRKTPV
:::::::::.:: ::.::.:::::::::::::.:::: :::::::::::::::::::::
gi|119 PGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVKSQTELRKTPV
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 SEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
::::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::
gi|119 SEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 AGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTS
::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ::::
gi|119 AGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTS
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 LPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQV
::::::::::::::::::.::::::::..:::::::::::::::::::::::::::::::
gi|119 LPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQV
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 QSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKV
:.:::::::::: ::::::::::::::::::::.::::::::::::::::::::::::::
gi|119 QGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKV
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 PEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
:::::::::::::::.::::: :.:::.::::::::::::::::::::::::::::::::
gi|119 PEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
830 840 850 860 870 880
900 910 920 930 940 950
mKIAA0 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
890 900 910 920 930 940
960 970 980 990 1000 1010
mKIAA0 FSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDH
::.:::::::.::::::::::::.::::::.::.: ::::::::::::::::::::::::
gi|119 FSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDH
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
mKIAA0 STPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGF
:::::::::::::::::::::::::::.::::::::::::::::: ::::::::::::::
gi|119 STPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGF
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
mKIAA0 GVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
1070 1080 1090 1100 1110 1120
1140 1150
mKIAA0 QLLMQQKQKQQRGQGAMNPPH
:::::::::::::::.:::::
gi|119 QLLMQQKQKQQRGQGTMNPPH
1130 1140
>>gi|56204520|emb|CAI19478.1| Smg-7 homolog, nonsense me (1099 aa)
initn: 5950 init1: 3896 opt: 7177 Z-score: 6066.2 bits: 1134.3 E(): 0
Smith-Waterman score: 7177; 95.905% identity (98.908% similar) in 1099 aa overlap (62-1157:1-1099)
40 50 60 70 80 90
mKIAA0 EVLKAEMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTL
::::::::::::::::::::::::::::::
gi|562 MLVTDLEYALDKKVEQDLWNHAFKNQITTL
10 20 30
100 110 120 130 140 150
mKIAA0 QGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 QGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNK
40 50 60 70 80 90
160 170 180 190 200 210
mKIAA0 QTHSSTIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL
:::.:.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 QTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL
100 110 120 130 140 150
220 230 240 250 260 270
mKIAA0 AILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDELKTKWGVSDFIKA
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
gi|562 AILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKA
160 170 180 190 200 210
280 290 300 310 320 330
mKIAA0 FIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 FIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFS
220 230 240 250 260 270
340 350 360 370 380 390
mKIAA0 NETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLR
::::::.::::::::::::::::::::::::::::::.::: : ::::::::::::::::
gi|562 NETEQHTYSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLR
280 290 300 310 320 330
400 410 420 430 440 450
mKIAA0 LRPRVFQEAVVDERQYIWPWLISLLNSFHPREDDLSNTNATPLPEEFELQGFLALRPSFR
::::::::::::::::::::::::::::::.:.:::. .:::::::::::::::::::::
gi|562 LRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSISATPLPEEFELQGFLALRPSFR
340 350 360 370 380 390
460 470 480 490 500 510
mKIAA0 NLDFSKGHQGITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 NLDFSKGHQGITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPEL
400 410 420 430 440 450
520 530 540 550 560 570
mKIAA0 ILEDPSEAKENLILQETSVVESLATDGSPGLKSVLSTGRNPSNSCDSGEKPVVTFKENIK
:::::::::::::::::::.::::.::::::::::::.:: ::.::.:::::::::::::
gi|562 ILEDPSEAKENLILQETSVIESLAADGSPGLKSVLSTSRNLSNNCDTGEKPVVTFKENIK
460 470 480 490 500 510
580 590 600 610 620
mKIAA0 SREVN--QGRSFPPKEVKSQTELRKTPVSEARKTPVTQTPSQTSNSQFIPIHHPGAFPPL
.:::: :::::::::::::::::::::::::::::::::.:.:::::::::::::::::
gi|562 TREVNRDQGRSFPPKEVKSQTELRKTPVSEARKTPVTQTPTQASNSQFIPIHHPGAFPPL
520 530 540 550 560 570
630 640 650 660 670 680
mKIAA0 PSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPY
::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
gi|562 PSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPY
580 590 600 610 620 630
690 700 710 720 730 740
mKIAA0 SQQRPSGPGPMNQGPQQSQPPSQPPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKVIPAL
::::::::::::::::::::::: ::::::::::::::::::::::.::::::::..:::
gi|562 SQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQPTAQSTSQLQVQALTQQQQSPTKAVPAL
640 650 660 670 680 690
750 760 770 780 790 800
mKIAA0 GKSPPHHSGFQQYQQADASKQLWNPPQVQSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPP
:::::::::::::::::::::::::::::.:::::::::: :::::::::::::::::::
gi|562 GKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPP
700 710 720 730 740 750
810 820 830 840 850 860
mKIAA0 VIQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQPNMDRRSKRSP
:.:::::::::::::::::::::::::::::::::::::::::.::::: :.:::.::::
gi|562 VMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRSVMAQQANIDRRGKRSP
760 770 780 790 800 810
870 880 890 900 910 920
mKIAA0 GVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 GVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASL
820 830 840 850 860 870
930 940 950 960 970 980
mKIAA0 PGRSLFKSLLEKPSELMSHSSSFLSLTGFSVNQERYPNSSMFNEVYGKNLTTSSKAELNP
::::::::::::::::::::::::::::::.:::::::.::::::::::::.::::::.:
gi|562 PGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTSSSKAELSP
880 890 900 910 920 930
990 1000 1010 1020 1030 1040
mKIAA0 SVASQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSAPFSN
:.: :::::::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|562 SMAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSN
940 950 960 970 980 990
1050 1060 1070 1080 1090 1100
mKIAA0 FGPIGTPDNRDRRPADRWKTDKPAMGGFGVDYLSATSSSESSWHQASTPSGTWTGHGPSM
::::::::::::: :::::::::::::::.::::::::::::::::::::::::::::::
gi|562 FGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGTWTGHGPSM
1000 1010 1020 1030 1040 1050
1110 1120 1130 1140 1150
mKIAA0 EDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
:::::::::::::::::::::::::::::::::::::::::::.:::::
gi|562 EDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
1060 1070 1080 1090
>>gi|109019248|ref|XP_001109289.1| PREDICTED: similar to (1447 aa)
initn: 5911 init1: 3644 opt: 7146 Z-score: 6038.5 bits: 1129.6 E(): 0
Smith-Waterman score: 7152; 92.188% identity (96.701% similar) in 1152 aa overlap (9-1157:264-1400)
10 20 30
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKAEM
:.. : .:.: ..: ::::::::.:
gi|109 GGEEDGGGRQHPRCRGAAPRSLRDPRRLRGKTRRRRMSLQSAQYL-----RQAEVLKADM
240 250 260 270 280
40 50 60 70 80 90
mKIAA0 TDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 TDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNR
290 300 310 320 330 340
100 110 120 130 140 150
mKIAA0 ANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.:
gi|109 ANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAI
350 360 370 380 390 400
160 170 180 190 200 210
mKIAA0 VKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSK
410 420 430 440 450 460
220 230 240 250 260 270
mKIAA0 GDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGH
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
gi|109 GDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGH
470 480 490 500 510 520
280 290 300 310 320 330
mKIAA0 VYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHS
530 540 550 560 570 580
340 350 360 370 380 390
mKIAA0 YSQDEQLCWTQLLALFMSFLGILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQ
::::::::::::::::::::::::::::::.::: : :::::::::::::::::::::::
gi|109 YSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQ
590 600 610 620 630 640
400 410 420 430 440 450
mKIAA0 EAVVDERQYIWPWLISLLNSFHPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKG
:::::::::::::::::::::::.:.:::.:.::::::::::::::::::::::::::::
gi|109 EAVVDERQYIWPWLISLLNSFHPHEEDLSSTSATPLPEEFELQGFLALRPSFRNLDFSKG
650 660 670 680 690 700
460 470 480 490 500 510
mKIAA0 HQGITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSE
::::::::::::::.::::::.::::::::::::::::::::::::::::::::::::::
gi|109 HQGITGDKEGQQRRLRQQRLIAIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSE
710 720 730 740 750 760
520 530 540 550 560 570
mKIAA0 AKENLILQETSVVESLATDGSPGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--
::::::::::::.::::.::::::::::::.:: ::.::.::::::::::::: ::::
gi|109 AKENLILQETSVIESLAADGSPGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKPREVNRD
770 780 790 800 810 820
580 590 600 610 620 630
mKIAA0 QGRSFPPKEVKSQTELRKTPVSEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFP
:::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::::
gi|109 QGRSFPPKEVKSQTELRKTPVSEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFP
830 840 850 860 870 880
640 650 660 670 680 690
mKIAA0 PPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSG
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
gi|109 PPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSG
890 900 910 920 930 940
700 710 720 730 740 750
mKIAA0 PGPMNQGPQQSQPPSQPPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHH
:::::::::::::::: ::::::::::::::::::::::.::::::::..::::::::::
gi|109 PGPMNQGPQQSQPPSQQPLTSLPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHH
950 960 970 980 990 1000
760 770 780 790 800 810
mKIAA0 SGFQQYQQADASKQLWNPPQVQSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPL
::::::::::::::::::::::.:::::::::: ::::::::::::::::::::.:::::
gi|109 SGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPL
1010 1020 1030 1040 1050 1060
820 830 840 850 860 870
mKIAA0 EKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQ
::::::::::::::::::::::::::::::::::::.::::: :.:::.:::::::::::
gi|109 EKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQ
1070 1080 1090 1100 1110 1120
880 890 900 910 920 930
mKIAA0 DPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFK
1130 1140 1150 1160 1170 1180
940 950 960 970 980 990
mKIAA0 SLLEKPSELMSHSSSFLSLTGFSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQET
:::::::::::::::::::::::.:::::::.::::::::::::.:::::::::.: :::
gi|109 SLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTSSSKAELNPSMAPQET
1190 1200 1210 1220 1230 1240
1000 1010 1020 1030 1040 1050
mKIAA0 SLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTP
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
gi|109 SLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTP
1250 1260 1270 1280 1290 1300
1060 1070 1080 1090 1100 1110
mKIAA0 DNRDRRPADRWKTDKPAMGGFGVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVL
:::::: :::::::::::::::.:::::::::::::::::::::::::::::::::::::
gi|109 DNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVL
1310 1320 1330 1340 1350 1360
1120 1130 1140 1150
mKIAA0 MESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
:::::. . .... :: ..:....: :.. :
gi|109 MESLKK-QQHGVQQLGP---------KRQSEEEGCGSICIVHRGPRPLPSCSLPASTFRV
1370 1380 1390 1400 1410
gi|109 KFKATRTCARHAQKKTQRRPFWKRRKKGK
1420 1430 1440
>>gi|119611565|gb|EAW91159.1| Smg-7 homolog, nonsense me (1266 aa)
initn: 5902 init1: 3638 opt: 7130 Z-score: 6025.7 bits: 1127.0 E(): 0
Smith-Waterman score: 7130; 95.463% identity (98.820% similar) in 1102 aa overlap (23-1120:3-1104)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .::::::::.::::::::::::::::::::::
gi|119 MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
:::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::
gi|119 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|119 AASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|119 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
:::::::::.::: : ::::::::::::::::::::::::::::::::::::::::::::
gi|119 ILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 HPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
::.:.:::. .:::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HPHEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::
gi|119 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGS
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 PGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QGRSFPPKEVKSQTELRKTPV
:::::::::.:: ::.::.:::::::::::::.:::: :::::::::::::::::::::
gi|119 PGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVKSQTELRKTPV
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 SEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
::::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::
gi|119 SEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 AGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTS
::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ::::
gi|119 AGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTS
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 LPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQV
::::::::::::::::::.::::::::..:::::::::::::::::::::::::::::::
gi|119 LPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQV
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 QSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKV
:.:::::::::: ::::::::::::::::::::.::::::::::::::::::::::::::
gi|119 QGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKV
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 PEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
:::::::::::::::.::::: :.:::.::::::::::::::::::::::::::::::::
gi|119 PEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
830 840 850 860 870 880
900 910 920 930 940 950
mKIAA0 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
890 900 910 920 930 940
960 970 980 990 1000 1010
mKIAA0 FSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDH
::.:::::::.::::::::::::.::::::.::.: ::::::::::::::::::::::::
gi|119 FSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDH
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
mKIAA0 STPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGF
:::::::::::::::::::::::::::.::::::::::::::::: ::::::::::::::
gi|119 STPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGF
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
mKIAA0 GVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
:.::::::::::::::::::::::::::::::::::::::::::
gi|119 GIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKVSRFQEQEPQDYYSKV
1070 1080 1090 1100 1110 1120
1140 1150
mKIAA0 QLLMQQKQKQQRGQGAMNPPH
gi|119 YLVQFHDASWTFCSGAAVNAAEAETATGTRHHEPSTLRPKWQPGNEGSINHGMLGLQDWP
1130 1140 1150 1160 1170 1180
>>gi|45708765|gb|AAH36381.1| SMG7 protein [Homo sapiens] (1178 aa)
initn: 5890 init1: 3626 opt: 7120 Z-score: 6017.6 bits: 1125.4 E(): 0
Smith-Waterman score: 7123; 92.625% identity (97.366% similar) in 1139 aa overlap (23-1157:3-1131)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .::::::::.::::::::::::::::::::::
gi|457 MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|457 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
:::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::
gi|457 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|457 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|457 AASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|457 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
:::::::::.::: : ::::::::::::::::::::::::::::::::::::::::::::
gi|457 ILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 HPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
::.:.:::. .:::::::::::::::::::::::::::::::::::::::::::::::::
gi|457 HPHEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::
gi|457 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGS
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 PGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QGRSFPPKEVKSQTELRKTPV
:::::::::.:: ::.::.:::::::::::::.:::: :::::::::::::::::::::
gi|457 PGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVKSQTELRKTPV
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 SEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
::::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::
gi|457 SEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 AGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTS
::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ::::
gi|457 AGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTS
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 LPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQV
::::::::::::::::::.::::::::..:::::::::::::::::::::::::::::::
gi|457 LPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQV
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 QSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKV
:.:::::::::: ::::::::::::::::::::.::::::::::::::::::::::::::
gi|457 QGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKV
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 PEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
:::::::::::::::.::::: :.:::.:::::.::::::::::::::::::::::::::
gi|457 PEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGIFRPEQDPVPRMPFEDPKSSPLLPPDL
830 840 850 860 870 880
900 910 920 930 940 950
mKIAA0 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
gi|457 LKSLAALEEEEELIFSNTPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
890 900 910 920 930 940
960 970 980 990 1000 1010
mKIAA0 FSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDH
::.:::::::.::::::::::::.::::::.::.: ::::::::::::::::::::::::
gi|457 FSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDH
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
mKIAA0 STPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGF
:::::::::::::::::::::::::::.::::::::::::::::: ::::::::::::::
gi|457 STPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGF
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
mKIAA0 GVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
:.::::::::::::::::::::::::::::::::::::::::::. . .... ::
gi|457 GIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKK-QQHGVQQLGP----
1070 1080 1090 1100 1110
1140 1150
mKIAA0 QLLMQQKQKQQRGQGAMNPPH
..:....:.... :
gi|457 -----KRQSEEEGSSSICVAHRGPRPLPSCSLPASTFRVKFKAARTCAHQAQKKTRRRPF
1120 1130 1140 1150 1160 1170
>>gi|42476070|ref|NP_963862.1| SMG-7 homolog isoform 2 [ (1091 aa)
initn: 5816 init1: 2246 opt: 5606 Z-score: 4739.2 bits: 888.8 E(): 0
Smith-Waterman score: 6948; 91.133% identity (94.469% similar) in 1139 aa overlap (23-1157:3-1091)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .::::::::.::::::::::::::::::::::
gi|424 MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|424 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
:::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::
gi|424 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|424 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|424 AASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|424 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
:::::::::.::: : ::::::::::::::::::::::::::::::::::::::::::::
gi|424 ILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 HPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
::.:.:::. .:::::::::::::::::::::::::::::::::::::::::::::::::
gi|424 HPHEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::
gi|424 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGS
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 PGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QGRSFPPKEVKSQTELRKTPV
:::::::::.:: ::.::.:::::::::::::.:::: :::::::::::::::::::::
gi|424 PGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVKSQTELRKTPV
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 SEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
::::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::
gi|424 SEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 AGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTS
::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ::::
gi|424 AGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTS
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 LPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQV
::::::::::::::::::.::::::::..:::::::::::::::::::::::::::::::
gi|424 LPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQV
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 QSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKV
:.:::::::::: ::::::::::::::::::::.::::::::::::::::::::::::::
gi|424 QGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKV
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 PEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
:::::::::::::::.::::: :.:::.::::::::::::::::::::
gi|424 PEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMPFE------------
830 840 850 860
900 910 920 930 940 950
mKIAA0 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
::::::::::::::::::::::
gi|424 --------------------------------------KSLLEKPSELMSHSSSFLSLTG
870 880 890
960 970 980 990 1000 1010
mKIAA0 FSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDH
::.:::::::.::::::::::::.::::::.::.: ::::::::::::::::::::::::
gi|424 FSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDH
900 910 920 930 940 950
1020 1030 1040 1050 1060 1070
mKIAA0 STPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGF
:::::::::::::::::::::::::::.::::::::::::::::: ::::::::::::::
gi|424 STPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGF
960 970 980 990 1000 1010
1080 1090 1100 1110 1120 1130
mKIAA0 GVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|424 GIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
1020 1030 1040 1050 1060 1070
1140 1150
mKIAA0 QLLMQQKQKQQRGQGAMNPPH
:::::::::::::::.:::::
gi|424 QLLMQQKQKQQRGQGTMNPPH
1080 1090
>>gi|168267238|dbj|BAG09675.1| Smg-7 homolog, nonsense m (1091 aa)
initn: 5815 init1: 2246 opt: 5605 Z-score: 4738.3 bits: 888.6 E(): 0
Smith-Waterman score: 6947; 91.045% identity (94.469% similar) in 1139 aa overlap (23-1157:3-1091)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .::::::::.::::::::::::::::::::::
gi|168 MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
:::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::
gi|168 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|168 AASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|168 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
:::::::::.::: : ::::::::::::::::::::::::::::::::::::::::::::
gi|168 ILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 HPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
::.:.:::. .:::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 HPHEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::
gi|168 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGS
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 PGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QGRSFPPKEVKSQTELRKTPV
:::::::::.:: ::.::.:::::::::::::.:::: :::::::::::::::::::::
gi|168 PGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVKSQTELRKTPV
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 SEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
::::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::
gi|168 SEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 AGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTS
::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ::::
gi|168 AGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTS
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 LPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQV
::::::::::::::::::.::::::::..:::::::::::::::::::::::::::::::
gi|168 LPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQV
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 QSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKV
:.:::::::::: ::::::::::::::::::::.::::::::::::::::::::::::::
gi|168 QGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKV
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 PEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
:::::::::::::::.::::: :.:::.:::::.::::::::::::::
gi|168 PEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGIFRPEQDPVPRMPFE------------
830 840 850 860
900 910 920 930 940 950
mKIAA0 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
::::::::::::::::::::::
gi|168 --------------------------------------KSLLEKPSELMSHSSSFLSLTG
870 880 890
960 970 980 990 1000 1010
mKIAA0 FSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDH
::.:::::::.::::::::::::.::::::.::.: ::::::::::::::::::::::::
gi|168 FSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDH
900 910 920 930 940 950
1020 1030 1040 1050 1060 1070
mKIAA0 STPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGF
:::::::::::::::::::::::::::.::::::::::::::::: ::::::::::::::
gi|168 STPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGF
960 970 980 990 1000 1010
1080 1090 1100 1110 1120 1130
mKIAA0 GVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 GIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
1020 1030 1040 1050 1060 1070
1140 1150
mKIAA0 QLLMQQKQKQQRGQGAMNPPH
:::::::::::::::.:::::
gi|168 QLLMQQKQKQQRGQGTMNPPH
1080 1090
>>gi|194210398|ref|XP_001489684.2| PREDICTED: Smg-7 homo (1091 aa)
initn: 5806 init1: 2238 opt: 5593 Z-score: 4728.2 bits: 886.7 E(): 0
Smith-Waterman score: 6933; 91.220% identity (94.205% similar) in 1139 aa overlap (23-1157:3-1091)
10 20 30 40 50
mKIAA0 SLWENVSFKSQMRTENLKSEEHLKSSN-IRQAEVLKAEMTDSKLGPAEVWTSRQALQDLY
:.:.. .::::::::.::::::::::::::::::::::
gi|194 MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLY
10 20 30 40
60 70 80 90 100 110
mKIAA0 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 QKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG
50 60 70 80 90 100
120 130 140 150 160 170
mKIAA0 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGD
:::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::::
gi|194 FYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGD
110 120 130 140 150 160
180 190 200 210 220 230
mKIAA0 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP
170 180 190 200 210 220
240 250 260 270 280 290
mKIAA0 AASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
:::::::::::::::::::.::::.:::::::::::::::::::::::::::::::::::
gi|194 AASTNLQKALSKALESRDEVKTKWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQF
230 240 250 260 270 280
300 310 320 330 340 350
mKIAA0 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 KRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLG
290 300 310 320 330 340
360 370 380 390 400 410
mKIAA0 ILCKCPLQNDSQE-SNNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
::::::::: ::: : ::::::::::::::::::::::::::::::::::::::::::::
gi|194 ILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSF
350 360 370 380 390 400
420 430 440 450 460 470
mKIAA0 HPREDDLSNTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLI
::.:.:::.::.::::::::::::::::::::::::::::::::::::::::.:::::::
gi|194 HPHEEDLSSTNVTPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLI
410 420 430 440 450 460
480 490 500 510 520 530
mKIAA0 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVVESLATDGS
:::::::::::::::::::::::::::::::::::::.:::::::::::::.::::.::.
gi|194 SIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPGEAKENLILQETSVIESLAADGN
470 480 490 500 510 520
540 550 560 570 580 590
mKIAA0 PGLKSVLSTGRNPSNSCDSGEKPVVTFKENIKSREVN--QGRSFPPKEVKSQTELRKTPV
:::::::::::. :::::.::::::::::::: :::: :::::::::::::::::::::
gi|194 PGLKSVLSTGRSLSNSCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVKSQTELRKTPV
530 540 550 560 570 580
600 610 620 630 640 650
mKIAA0 SEARKTPVTQTPSQTSNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
gi|194 SEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFP
590 600 610 620 630 640
660 670 680 690 700 710
mKIAA0 AGVSVPGTFLQSTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTS
::::::::::: :::::::::::::::::::::::::::::::::::: ::::: ::::
gi|194 AGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQPPQPPSQQPLTS
650 660 670 680 690 700
720 730 740 750 760 770
mKIAA0 LPAQPTAQSTSQLQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQV
:::::::::::::::::::::::::::..:::::::::::::::::::::::::::::::
gi|194 LPAQPTAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQV
710 720 730 740 750 760
780 790 800 810 820 830
mKIAA0 QSPLGKIMPVKQSYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKV
:.:::::::::: ::::::::::::::::::::.::::::::::::::::::::::::::
gi|194 QGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKV
770 780 790 800 810 820
840 850 860 870 880 890
mKIAA0 PEFYWDSSYSMADNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDL
::::::::::::::::::::: :::::.::::::::::::::::::::
gi|194 PEFYWDSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFE------------
830 840 850 860
900 910 920 930 940 950
mKIAA0 LKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTG
::::::::::::::::::::::
gi|194 --------------------------------------KSLLEKPSELMSHSSSFLSLTG
870 880 890
960 970 980 990 1000 1010
mKIAA0 FSVNQERYPNSSMFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDH
::.:::::::.:.::::::::::::::::::::.: ::::::::::::::::::::::::
gi|194 FSLNQERYPNNSVFNEVYGKNLTTSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDH
900 910 920 930 940 950
1020 1030 1040 1050 1060 1070
mKIAA0 STPASQSPHSSNPSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGF
:::::::::::::::::::::::::::.::::::::::::::::: ::::::::::::::
gi|194 STPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGF
960 970 980 990 1000 1010
1080 1090 1100 1110 1120 1130
mKIAA0 GVDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
:.::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
gi|194 GIDYLSATSSSESSWHQASTPSGTWTSHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALE
1020 1030 1040 1050 1060 1070
1140 1150
mKIAA0 QLLMQQKQKQQRGQGAMNPPH
:::::::::::::::.:::::
gi|194 QLLMQQKQKQQRGQGTMNPPH
1080 1090
1157 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Mar 13 16:15:28 2009 done: Fri Mar 13 16:25:00 2009
Total Scan time: 1238.390 Total Display time: 0.760
Function used was FASTA [version 34.26.5 April 26, 2007]