Comparison of KIAA cDNA sequences between mouse and human (KIAA0398)

<<Original sequence data>>

mouse  mKIAA0398 (mbg17696)     length:   4941 bp, CDS:    45 -  1448
human   KIAA0398  (hg00376)     length:   6203 bp, CDS:   197 -  1627

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:    147 -   196      33       17      34.0
  CDS:    197 -  1633    1137      257      18.4
3'UTR:   1634 -  6449    1912     1427      42.7

amino acid

  CDS:    197 -  1633     356      121      25.4
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mbg17696     1 .................................................. 1
                                                                 
hg00376      1 AACAGAATCGCGTTTGGCTGTGCTGGATGTGTGAACCTATTGGGTACTGT 50

            51 ----+----*----+----*----+----*----+----*----+----* 100
mbg17696     1 .................................................. 1
                                                                 
hg00376     51 ACAACTTCAAGCCTCGAAATCAGATAGGCACCACCAACCTCATTTCCTGT 100

           101 ----+----*----+----*----+----*----+----*----+----* 150
mbg17696     1 ..............................................CTGT 4
                                                              |  
hg00376    101 TTCACCTTGATTTTCTGTGATACCAAAATCTCAGCTTCACAAAGTCATTG 150

           151 ----+----*----+----*----+----*----+----*----+----* 200
                                                             M  E
mbg17696     5 GTGGTGTCGATTGATGAGGTTTTGCTGTCAGTTCAAGTAACGAGAAATGG 54
                  |||| | || |||| ||||| |  ||| |||||||||  | ||||||
hg00376    151 AAAGTGTTGGTTCATGAAGTTTTACCATCAATTCAAGTAATCATAAATGG 200
                                                             M  A

           201 ----+----*----+----*----+----*----+----*----+----* 250
                 G  -                                         A  
mbg17696    55 AAGGTTC.......................................CGCG 65
                |  |||                                        || 
hg00376    201 CAAATTCTGCAAAAGCAGAAGAATATGAAAAGATGTCTCTTGAACAGGCA 250
                 N  S  A  K  A  E  E  Y  E  K  M  S  L  E  Q  A  

           251 ----+----*----+----*----+----*----+----*----+----* 300
               K  A  S  V  A  S  D  P  E  S  P  P  G  G  N  E  P 
mbg17696    66 AAAGCGTCAGTCGCTTCTGACCCAGAGTCCCCTCCAGGTGGTAATGAGCC 115
               |||||||||||   ||||||  |||||||  |      |  ||||||   
hg00376    251 AAAGCGTCAGTGAATTCTGAAACAGAGTCTTCATTCAATATTAATGAAAA 300
               K  A  S  V  N  S  E  T  E  S  S  F  N  I  N  E  N 

           301 ----+----*----+----*----+----*----+----*----+----* 350
                A  A  A  S  G  Q  R  L  P  E  N  T  P  P  C  Q  Q
mbg17696   116 CGCTGCTGCCTCTGGGCAGAGGCTTCCAGAAAATACTCCTCCATGCCAGC 165
               | |  | || ||||||    ||||| | ||||| ||| ||   ||   ||
hg00376    301 CACAACAGCTTCTGGGACTGGGCTTTCTGAAAAGACTTCTGTCTGTAGGC 350
                T  T  A  S  G  T  G  L  S  E  K  T  S  V  C  R  Q

           351 ----+----*----+----*----+----*----+----*----+----* 400
                 V  D  Q  P  K  M  Q  K  E  F  G  E  D  L  V  E  
mbg17696   166 AAGTAGATCAGCCAAAAATGCAGAAGGAGTTTGGGGAGGATCTTGTAGAG 215
               |||||||     ||| || |   || |||||||  || ||||||||| ||
hg00376    351 AAGTAGACATAGCAAGAAAGAGAAAAGAGTTTGAAGATGATCTTGTAAAG 400
                 V  D  I  A  R  K  R  K  E  F  E  D  D  L  V  K  

           401 ----+----*----+----*----+----*----+----*----+----* 450
               Q  N  S  S  Y  V  Q  D  S  P  S  K  K  R  K  L  D 
mbg17696   216 CAAAATTCGAGTTATGTGCAAGATTCTCCATCCAAGAAAAGGAAACTTGA 265
                ||| ||| |||| || | ||||  ||||||||||||| || ||||||||
hg00376    401 GAAAGTTCTAGTTGTGGGAAAGACACTCCATCCAAGAAGAGAAAACTTGA 450
               E  S  S  S  C  G  K  D  T  P  S  K  K  R  K  L  D 

           451 ----+----*----+----*----+----*----+----*----+----* 500
                V  E  I  I  L  E  E  K  H  S  E  D  D  G  G  S  A
mbg17696   266 TGTTGAAATCATCTTAGAGGAAAAGCACTCTGAGGATGATGGAGGTTCGG 315
               |  ||||||  ||  |||||||||  | | ||  |||| || |||     
hg00376    451 TCCTGAAATTGTCCCAGAGGAAAAAGATTGTGGTGATGCTGAAGGCAATT 500
                P  E  I  V  P  E  E  K  D  C  G  D  A  E  G  N  S

           501 ----+----*----+----*----+----*----+----*----+----* 550
                 K  R  S  K  L  E  R  G  D  V  S  E  D  E  P  S  
mbg17696   316 CAAAGAGAAGCAAACTGGAAAGAGGTGATGTGTCGGAAGATGAGCCTTCC 365
               |||||| ||| |||   ||||  |  |||||  |  ||||| |  |||| 
hg00376    501 CAAAGAAAAGAAAAAGAGAAACTGAGGATGTTCCAAAAGATAAATCTTCT 550
                 K  K  R  K  R  E  T  E  D  V  P  K  D  K  S  S  

           551 ----+----*----+----*----+----*----+----*----+----* 600
               L  G  R  L  N  Q  T  K  R  K  L  Q  P        D  E 
mbg17696   366 CTTGGTAGGCTTAACCAGACCAAGAGAAAACTGCAGCCTCAGGACGATGA 415
                 |||       |  || |  ||||||||| |    | |      || ||
hg00376    551 ACTGGAGATGGCACTCAAAATAAGAGAAAAATAGCACTT......GAGGA 594
               T  G  D  G  T  Q  N  K  R  K  I  A  L        E  D 

           601 ----+----*----+----*----+----*----+----*----+----* 650
                V  P  Q  K  L  Q  K  L  E  E  G  H  S  S  A  V  A
mbg17696   416 GGTACCGCAGAAGTTGCAGAAGCTGGAGGAAGGACACAGCTCAGCCGTGG 465
                || ||  | |||  | | || ||||| ||||||||||||||| | ||||
hg00376    595 TGTTCCTGAAAAGCAGAAAAATCTGGAAGAAGGACACAGCTCAACAGTGG 644
                V  P  E  K  Q  K  N  L  E  E  G  H  S  S  T  V  A

           651 ----+----*----+----*----+----*----+----*----+----* 700
                 A  H  Y  N  E  L  Q  E  V  G  L  A  K  R  S  Q  
mbg17696   466 CTGCCCACTATAATGAGCTTCAGGAAGTTGGCCTGGCGAAGCGTAGTCAA 515
               ||||||| || ||||| ||||||||||||||  ||| |||||||||||||
hg00376    645 CTGCCCATTACAATGAACTTCAGGAAGTTGGTTTGGAGAAGCGTAGTCAA 694
                 A  H  Y  N  E  L  Q  E  V  G  L  E  K  R  S  Q  

           701 ----+----*----+----*----+----*----+----*----+----* 750
               S  R  I  F  Y  L  R  N  F  N  N  W  I  K  S  I  L 
mbg17696   516 AGTCGCATTTTTTACCTAAGAAACTTCAATAATTGGATTAAAAGTATTCT 565
               ||||| |||||||||||||||||||| ||||||||||| |||||| ||||
hg00376    695 AGTCGTATTTTTTACCTAAGAAACTTTAATAATTGGATGAAAAGTGTTCT 744
               S  R  I  F  Y  L  R  N  F  N  N  W  M  K  S  V  L 

           751 ----+----*----+----*----+----*----+----*----+----* 800
                I  G  E  I  L  E  K  V  R  Q  R  K  T  R  D  I  T
mbg17696   566 GATTGGGGAAATTTTAGAAAAGGTACGACAAAGAAAAACCCGTGACATCA 615
                ||||| ||| |||| |||||||||||||| |  ||||  ||||| ||||
hg00376    745 CATTGGAGAATTTTTGGAAAAGGTACGACAGAAGAAAAAACGTGATATCA 794
                I  G  E  F  L  E  K  V  R  Q  K  K  K  R  D  I  T

           801 ----+----*----+----*----+----*----+----*----+----* 850
                 V  L  D  L  G  C  G  K  G  G  D  L  L  K  W  R  
mbg17696   616 CTGTTTTGGACCTGGGATGTGGAAAAGGTGGAGATTTGCTCAAGTGGAGG 665
               |||||||||||||||||||||| ||||||||||||||||| || ||||  
hg00376    795 CTGTTTTGGACCTGGGATGTGGTAAAGGTGGAGATTTGCTGAAATGGAAA 844
                 V  L  D  L  G  C  G  K  G  G  D  L  L  K  W  K  

           851 ----+----*----+----*----+----*----+----*----+----* 900
               K  G  R  I  S  R  L  V  C  A  D  I  A  D  I  S  M 
mbg17696   666 AAGGGGAGAATTAGCAGGCTAGTGTGTGCTGATATCGCTGATATTTCTAT 715
               || || ||||||| || |||||| ||| ||||||| || ||| ||||| |
hg00376    845 AAAGGAAGAATTAACAAGCTAGTTTGTACTGATATTGCCGATGTTTCTGT 894
               K  G  R  I  N  K  L  V  C  T  D  I  A  D  V  S  V 

           901 ----+----*----+----*----+----*----+----*----+----* 950
                K  Q  C  Q  Q  R  Y  E  D  M  R  C  R  R  D  N  E
mbg17696   716 GAAACAATGTCAACAGCGTTACGAAGACATGAGATGTCGTCGCGATAATG 765
                ||||| ||||| ||||| || || ||||||| |  |||||| |||| ||
hg00376    895 CAAACAGTGTCAGCAGCGGTATGAGGACATGAAAAATCGTCGTGATAGTG 944
                K  Q  C  Q  Q  R  Y  E  D  M  K  N  R  R  D  S  E

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                 H  I  F  S  A  E  F  I  T  A  D  C  S  K  E  L  
mbg17696   766 AGCATATTTTTAGTGCAGAATTTATAACTGCTGACTGTTCAAAGGAACTT 815
               |  ||||||| |||||||||||||||||||||||| | ||||||||||||
hg00376    945 AATATATTTTCAGTGCAGAATTTATAACTGCTGACAGCTCAAAGGAACTT 994
                 Y  I  F  S  A  E  F  I  T  A  D  S  S  K  E  L  

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
               L  V  E  K  F  R  D  P  E  M  Y  F  D  V  C  S  C 
mbg17696   816 TTGGTTGAAAAATTCCGTGACCCAGAAATGTACTTTGATGTCTGCAGCTG 865
                || |||| ||||| ||||||||| ||||||  |||||  ||||||| ||
hg00376    995 CTGATTGACAAATTTCGTGACCCACAAATGTGTTTTGACATCTGCAGTTG 1044
               L  I  D  K  F  R  D  P  Q  M  C  F  D  I  C  S  C 

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                Q  F  A  C  H  Y  S  F  E  S  Q  V  Q  A  D  T  M
mbg17696   866 CCAGTTTGCTTGCCATTACTCCTTTGAGTCCCAGGTGCAGGCGGATACGA 915
                |||||||  || |||||||| ||||||||  | | |||||| || | ||
hg00376   1045 TCAGTTTGTCTGTCATTACTCATTTGAGTCTTATGAGCAGGCTGACATGA 1094
                Q  F  V  C  H  Y  S  F  E  S  Y  E  Q  A  D  M  M

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                 L  R  N  A  C  G  R  L  N  P  G  G  Y  F  I  G  
mbg17696   916 TGCTTAGAAATGCCTGCGGGAGGCTTAACCCTGGCGGCTATTTTATTGGC 965
               |||| |||||||| || | ||| |||| |||||| |||||||||||||| 
hg00376   1095 TGCTGAGAAATGCGTGTGAGAGACTTAGCCCTGGGGGCTATTTTATTGGT 1144
                 L  R  N  A  C  E  R  L  S  P  G  G  Y  F  I  G  

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
               T  T  P  N  S  F  E  L  I  R  R  L  E  A  S  E  T 
mbg17696   966 ACCACTCCCAATAGCTTTGAACTGATAAGACGCCTTGAAGCTTCAGAAAC 1015
               || |||||||||||||||||| ||||||||||||||||||||||||||||
hg00376   1145 ACTACTCCCAATAGCTTTGAATTGATAAGACGCCTTGAAGCTTCAGAAAC 1194
               T  T  P  N  S  F  E  L  I  R  R  L  E  A  S  E  T 

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                E  S  F  G  N  E  I  Y  T  V  K  F  Q  K  K  G  N
mbg17696  1016 AGAATCATTTGGAAATGAAATATACACTGTGAAATTCCAGAAGAAAGGAA 1065
               |||||||||||||||||||||||| ||||||||||| |||||||||||| 
hg00376   1195 AGAATCATTTGGAAATGAAATATATACTGTGAAATTTCAGAAGAAAGGAG 1244
                E  S  F  G  N  E  I  Y  T  V  K  F  Q  K  K  G  D

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                 Y  P  L  F  G  C  K  Y  D  F  N  L  E  G  V  V  
mbg17696  1066 ATTATCCTTTATTTGGCTGCAAATATGACTTTAACTTGGAAGGTGTTGTG 1115
               ||||||||||||||||||||||||||||||| ||||||||||||||||||
hg00376   1245 ATTATCCTTTATTTGGCTGCAAATATGACTTCAACTTGGAAGGTGTTGTG 1294
                 Y  P  L  F  G  C  K  Y  D  F  N  L  E  G  V  V  

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
               D  V  P  E  F  L  V  Y  F  P  L  L  T  E  M  A  K 
mbg17696  1116 GATGTCCCTGAATTCTTGGTCTATTTTCCATTGCTAACTGAAATGGCAAA 1165
               ||||| ||||||||||||||||||||||||||||||| ||||||||||||
hg00376   1295 GATGTTCCTGAATTCTTGGTCTATTTTCCATTGCTAAATGAAATGGCAAA 1344
               D  V  P  E  F  L  V  Y  F  P  L  L  N  E  M  A  K 

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                K  Y  N  M  K  L  I  Y  K  K  T  F  L  E  F  Y  E
mbg17696  1166 GAAGTATAATATGAAACTAATCTACAAAAAAACATTTTTGGAATTCTATG 1215
               |||||| |||||||||||| ||||||||||||||||| |||||||||| |
hg00376   1345 GAAGTACAATATGAAACTAGTCTACAAAAAAACATTTCTGGAATTCTACG 1394
                K  Y  N  M  K  L  V  Y  K  K  T  F  L  E  F  Y  E

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
                 E  K  I  K  N  N  E  N  K  M  L  L  K  R  M  Q  
mbg17696  1216 AAGAAAAGATTAAAAACAATGAAAACAAAATGCTCTTAAAACGAATGCAG 1265
               ||||||||||||| ||||||||||| ||||||||||||||||||||||||
hg00376   1395 AAGAAAAGATTAAGAACAATGAAAATAAAATGCTCTTAAAACGAATGCAG 1444
                 E  K  I  K  N  N  E  N  K  M  L  L  K  R  M  Q  

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
               A  L  E  Q  Y  P  A  H  E  N  S  K  L  A  S  E  K 
mbg17696  1266 GCCCTGGAGCAATACCCTGCACATGAGAACTCTAAACTTGCCTCTGAAAA 1315
               ||| |||||| ||| |||||| ||||||  |||||||||| |||||| ||
hg00376   1445 GCCTTGGAGCCATATCCTGCAAATGAGAGTTCTAAACTTGTCTCTGAGAA 1494
               A  L  E  P  Y  P  A  N  E  S  S  K  L  V  S  E  K 

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                V  G  D  Y  T  H  A  A  E  Y  L  K  K  S  Q  V  R
mbg17696  1316 GGTGGGTGACTACACGCATGCAGCAGAGTACCTGAAGAAGAGCCAAGTGA 1365
               ||||| ||||||    ||||||||| ||||| ||||||| || ||||| |
hg00376   1495 GGTGGATGACTATGAACATGCAGCAAAGTACATGAAGAACAGTCAAGTAA 1544
                V  D  D  Y  E  H  A  A  K  Y  M  K  N  S  Q  V  R

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
                 L  P  L  G  T  L  S  K  S  E  W  E  A  T  S  I  
mbg17696  1366 GGTTACCTCTGGGAACCTTAAGTAAGTCAGAATGGGAAGCTACAAGTATC 1415
               |||||||| |||||||||||||||| ||||||||||||||||||||||| 
hg00376   1545 GGTTACCTTTGGGAACCTTAAGTAAATCAGAATGGGAAGCTACAAGTATT 1594
                 L  P  L  G  T  L  S  K  S  E  W  E  A  T  S  I  

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
               Y  L  V  F  A  F  E  K  Q  Q  *                   
mbg17696  1416 TACTTGGTCTTTGCCTTTGAGAAGCAGCAGTGAGCAC..........GTT 1455
               |||||||| |||||||||||||| |||||||||||||          || 
hg00376   1595 TACTTGGTGTTTGCCTTTGAGAAACAGCAGTGAGCACATAGGCAGTAGTC 1644
               Y  L  V  F  A  F  E  K  Q  Q  *                   

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mbg17696  1456 GCTTTAGAGCAGCACTCCATCCT..CCCAGGTGGAGCAGACCATCTCAGA 1503
                |    | || |   ||  ||||   | |  | || ||   |||||| ||
hg00376   1645 CCAGAGGGGCCGTGTTCTGTCCTGCACAAATTTGAACAACTCATCTC.GA 1693

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mbg17696  1504 AACATTTGACA....GCTGTTTGTTTATTTTAATAGTAAGTTCTCAATGT 1549
                | |||||| |     |||| |||| |||||||       |||| |||||
hg00376   1694 TATATTTGATATTTCTCTGTCTGTTGATTTTAA.......TTCTAAATGT 1736

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mbg17696  1550 GTAGGATGCTGCCACAAACTTCAGTGTATGAATTTGACACTTACTGTCTG 1599
               | |||||||||||| ||||| || ||||  ||||  ||| || |||||||
hg00376   1737 GCAGGATGCTGCCAGAAACTCCAATGTAGAAATTCAACATTTGCTGTCTG 1786

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mbg17696  1600 TGACAGGTTAGC.ATAATGTGTGTACATAGGGATGAGTTG.......... 1638
               |||||| | | |  |    |||||| ||| | ||||||||          
hg00376   1787 TGACAGATGAACTTTTGCATGTGTATATAAGAATGAGTTGGGACCTCTGT 1836

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mbg17696  1639 TCTTGAAGATCTATTTTTAAGTACTGTTGTAATTGTTCC........... 1677
                 || || ||||||||||| ||| |||| |||   ||||           
hg00376   1837 CTTTAAAAATCTATTTTTAGGTAATGTTCTAAGAATTCCATTTGCCTCTA 1886

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mbg17696  1678 ...CCTCTACTGTCAAAACTCTAGCAAGGCATGTCAGAGCAGCTGACCTC 1724
                   ||   ||   |||| | ||  | | | ||  | |||| || | |||
hg00376   1887 TGATCTTAGCTCATAAAAATATAATATGACTTGATAAAGCAACTAAACTC 1936

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mbg17696  1725 CCCAGTGCTGTGATGTGTGAGCAGCTGACCTCCCCAGTGCTGGGATGTG. 1773
                 |                            || ||||| |  ||| || 
hg00376   1937 TTC............................CCACAGTGTTCAGATTTGT 1958

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mbg17696  1774 ..TGAATGTGTTTACAGAGCTGATTTGACAGTCG..CTAGAATTGGCAGA 1819
                 ||  |||||||||||   | | || |  |  |   |||||||||    
hg00376   1959 CCTGTGTGTGTTTACAGTATTCAATTTATTGCAGTTATAGAATTGGTCAG 2008

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mbg17696  1820 GGAACGTTCAC......................GTTTCCTTACAGTGTTT 1847
                || | ||  |                       ||    || ||  |||
hg00376   2009 AGAGCATTTTCATAGTGTGCTCATTTCTATGGTTTTGTTATATAGCATTT 2058

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mbg17696  1848 TTCAAGATTTAATGGATTGTGTTCTGTATACTTGAATGTAAGTGTTCAAT 1897
               ||||| |||||||||       |||||| | |||||||||||||||||||
hg00376   2059 TTCAACATTTAATGG.......TCTGTACAGTTGAATGTAAGTGTTCAAT 2101

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mbg17696  1898 ATATATTGCTAAAGTTATAAGATTAAATTTTGATTTTAGATTGTCCTAAG 1947
               || ||||||| |||||||||| |||||  |  |||| ||||  || ||| 
hg00376   2102 ATGTATTGCTGAAGTTATAAGTTTAAAACTCAATTTCAGATGCTCATAAA 2151

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mbg17696  1948 AGCTACCTGGCTAGATTTTGACCGTGTTTCAATAAAAT.AACTATTTGCT 1996
               || ||| | |||| | ||| | |   ||     |   | || || |   |
hg00376   2152 AGTTACTTAGCTAAAATTTTAGCAATTTATTGCATTTTGAAATAATCATT 2201

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mbg17696  1997 AATACACTGCAATTCTGAGACTCTATAGACGAACTTAGATGGCAGCACAG 2046
               || |  ||||||||| |   ||   ||||  |  |||  |||||||| ||
hg00376   2202 AACATGCTGCAATTCAGGAGCTGGTTAGAACATTTTAAGTGGCAGCATAG 2251

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mbg17696  2047 AGTTAGTGTGGACTGGTTGGATGTTCTCTTTAGAATTTCTTACCGTAGCA 2096
               |   | | |||| |  | ||   |||| || |||| ||  |||| ||| |
hg00376   2252 A...ATTTTGGAATTTTGGGGCTTTCTTTTCAGAAATTGCTACCATAGTA 2298

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mbg17696  2097 ATTAGCATATCTAATTACTGAGGTTGTGATTA...AGGTACGAGTAACTT 2143
               ||||   | || | |||   || |||||||||   |  |     |  |||
hg00376   2299 ATTAATGTTTCCAGTTATCAAGATTGTGATTAGACACATTTACCTTTCTT 2348

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mbg17696  2144 CACTGGAC.AGTGATTCCATGGCTAGATTTCCTTAAGGTTTTGTGAAAAT 2192
               || || || | || | |||| | ||  ||| || ||  ||| ||||||||
hg00376   2349 CATTGAACAAATGGTGCCATAGTTA.TTTTTCTCAAAATTTAGTGAAAAT 2397

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mbg17696  2193 GCC.ACGTCCTAATTGTGTTCCATAATGTTTTCCGATGGATGTGTGCACG 2241
                ||  |    ||    |||| || | | ||| |  ||  ||   || |  
hg00376   2398 CCCTCCCATGTAGACATGTTGCACATTTTTTCCAAATTTATACATGGAAC 2447

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mbg17696  2242 TGCAGTAGGAACA...GCACAGTGAGATGCATTTCAGATGAATCCTCACC 2288
               ||||||||||| |    |||  |  |||||       ||| | || |  |
hg00376   2448 TGCAGTAGGAATATTCTCACCATCTGATGC......CATGTACCCACTTC 2491

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mbg17696  2289 AATAAGACAACTCACTCACCAATGCTGTATCCTTCCAGGTCCCAACATGC 2338
               |  ||          | | |||| ||   ||||                 
hg00376   2492 AGAAA..........TAAGCAATACTTGTTCCT................. 2514

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mbg17696  2339 AGCTCCTGCCCGTCTCACAACACTGGGACTCCCTCCCTAAGGCAGACCCC 2388
                           | | |||||    | |||     ||  ||   || || 
hg00376   2515 ...........CTGTTACAACCTCAGCACTTTGCACCGTAG...GAGCCA 2550

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mbg17696  2389 GCTGTCTAATTGTC.TTTCAGACATTAACTGTTGAGACGTTAATGGTGTA 2437
                   |  | |||||  ||  |  | | |||| |    |   | ||||   
hg00376   2551 TTGTTAAAGTTGTCACTTGTGTAACTGACTGCTTTTCCAAAACTGGT... 2597

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mbg17696  2438 GTAGTCGGCGTGGCTGCCTTCCAAGGGTTTACTTGCTGTCCCACAGCCAT 2487
                            ||  | |  |  | | | |||||| | |  || |  |
hg00376   2598 ............ACTTACGTGAACTGTTGTCCTTGCTTTACACCACCATT 2635

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mbg17696  2488 CATGATTGTCATTGTCAGTTAGAGAGCCGTCTTCTAGAACTGAGGCCACA 2537
                   |   | |       |||||         | ||||  |   |  | |
hg00376   2636 TGGAAAACTTACCAGTTTTTAGA.........TGTAGATGTAGTGAAAAA 2676

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mbg17696  2538 CTGAAGAAACTTGTCAGCCTTTACATCAAGAAACTTAAGAGCAAATATAA 2587
               ||  |  ||                              |||| |   | 
hg00376   2677 CTTCAAGAA...........................TGAAGCAGAGCAAT 2699

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mbg17696  2588 TTAGACATTTGTTTAAAAATCACTTACTTAAAGGACAATTTACAAAGATG 2637
               | ||   | | ||| |||      |  ||||   |  ||||||||| |  
hg00376   2700 TGAGTATTCTTTTTTAAA......TTATTAAGCCATGATTTACAAAAACA 2743

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mbg17696  2638 CTACTTTCTGTAAAAATCTATAGTACTTGCTTTTAAAATAGGCTCAGGGC 2687
                ||||||||||   |||  | | |||||| ||| ||||    |  || | 
hg00376   2744 TTACTTTCTGT...AATTCACAATACTTGTTTTAAAAA....CATAGTGT 2786

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mbg17696  2688 CAGAGAGGTGGCTCAGTAGTTCAGAGTGCTGGCTGCGCGTGGAGAAGACC 2737
               |         |  ||    || |  || |  | ||   | |  | | || 
hg00376   2787 CTTCATTAGTGTGCATCTATTAACTGTTCATGGTGTTAGAGTTGCAAAC. 2835

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mbg17696  2738 CAGGTTCAGTTCCCAGCACCTACATGACAGCTTACAACCATCAGTAACTC 2787
                        ||   ||||   | ||                         
hg00376   2836 .........TTTTTAGCAAGAAAAT......................... 2851

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mbg17696  2788 TAGTTCCAGGGGATCTGACATCATCTTTTGGCCTCCCTGGGCACCAGGCA 2837
                               ||  || || |||    ||| |  ||| |  |  
hg00376   2852 .............ATGGATTTCCTCATTTCAGTTCCTTCTGCAGCCTG.. 2886

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mbg17696  2838 TGTGCATAGTACATACATATAATGTGCAGGCAGAATACACATATAAAGTA 2887
                        |  ||    | || |||    |||  ||||     ||| ||
hg00376   2887 .........TGAATCTCCACAAAGTGTTACCAGTTTACA.....AAAATA 2922

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mbg17696  2888 AAAATAATTACTTAAAAAAATTAAAGTTATAATCTAGTTTATAT.AGTCA 2936
               |   |  || | | ||   |||   |  ||||   |   |  ||  | | 
hg00376   2923 AGTCTTTTTGCCTTAAGTCATTTTGGAAATAAGTAATACTGCATCTGACT 2972

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mbg17696  2937 CTGTTCTTAGTATT.TAGAGGGTAGATTTGGTTCTGGTGCGGGGGTTGTG 2985
               ||| |    |||||    |||  || ||||    |||||   | |  |||
hg00376   2973 CTGGTGGCTGTATTAGCTAGGAAAGGTTTGTAAATGGTGTCAGTGAGGTG 3022

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mbg17696  2986 GGTTGTGGGTGGATGGGGAGGAATGTTCTTGCTCTTAGAAATTCAGGCTC 3035
               ||    ||  |               |||| || | | | || |||| ||
hg00376   3023 GGGAAAGGAAG...............TCTTCCTGTCACATATGCAGGTTC 3057

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mbg17696  3036 ATTTTATTCCTGGGGAAGTTCCAGAAAGTATTTTGAT.GATGTGGCGTAG 3084
                ||||  | || ||| ||| |||| |||||| ||||| | | ||  |   
hg00376   3058 GTTTTCATTCTAGGGCAGTGCCAGGAAGTATATTGATAGCTTTGTAGGTA 3107

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mbg17696  3085 TAGAGAAAGCTTC................GTCACAATTCATGATCTTAGT 3118
                ||  ||| | ||                 ||||| ||  || ||||| |
hg00376   3108 CAGGAAAAACATCATCATTATTTCCTCTGTTCACATTTACTGGTCTTAAT 3157

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mbg17696  3119 TAACAGTTGGTACGTCATTTTTAGTCTTTTTCTGCCCTTTCCATTCCATC 3168
               |||||| |  ||  | ||   |   |||||          |  |||||  
hg00376   3158 TAACAGGTAATA.ATAATACATGTACTTTTAGCCTGAAACCTCTTCCACG 3206

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mbg17696  3169 CCATGGGTCATTTTTAGGAGAGAAGAATTCTTCAAAGGGTGGAATAATTG 3218
               |||||||| | ||   |||||||||||| || |||| | |||| ||    
hg00376   3207 CCATGGGTAACTTGGGGGAGAGAAGAATCCTCCAAACGATGGAGTAGCCA 3256

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mbg17696  3219 ATGGTTATCCCAAGCAGCAAGAAGAGAAATGTGGAGGTCTTGGGCCCTTC 3268
                |||| || | ||||||  |||| ||||| || ||| |  |  | |||||
hg00376   3257 GTGGTAATACAAAGCAGGGAGAACAGAAAGGTAGAGTTACTAAGGCCTTC 3306

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mbg17696  3269 CCTGAGGACTCAG....AGAAAACTGGCCTGGGTCTGAGATG.GGCTCTA 3313
                 |||  |   ||    ||| | |  |  | | ||||||| |  ||||| 
hg00376   3307 AGTGAACAGAAAGGAGCAGAGAGCAAGATTAGATCTGAGAAGATGCTCTG 3356

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mbg17696  3314 GTCATTATACCTACTGTCAAAGACATAGGAGAGTTTCCATGATGTCAC.C 3362
               |  | |   || |||||    |   |  | |||  |   ||  | ||| |
hg00376   3357 GGGACTGAGCCCACTGTTGTTGGTGTCAGGGAGGCTTACTGGAGCCACAC 3406

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mbg17696  3363 CTACAGAAAC..AGTTCAAGCA......................GCTGCC 3388
               || |||   |   ||||| |||                       ||| |
hg00376   3407 CTGCAGGCGCTGTGTTCAGGCACCACCTTCCTCCTTGAGCTTTGCCTGTC 3456

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mbg17696  3389 TTTTTCCTTTTGTGTTCCTCTCTGTTGAACGTCCATCCCTCCACCC.... 3434
               | || |||| |  |||| ||       | | | || ||| |  |||    
hg00376   3457 TCTTGCCTTATCAGTTCTTCCTCCACCACCCTACACCCCCCTCCCCCCGG 3506

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mbg17696  3435 ................CTCCTTGCAGAAGTTCAGTGACTCAGGAT..... 3463
                               |||||||    | || |||  ||    ||     
hg00376   3507 CCCCAAGCCCCTGTGTCTCCTTGTTACAATTAAGTTTCTGGATATTGACT 3556

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mbg17696  3464 ...GGATTCTTGAGGACAAGAATGGGAAGGTGGTCTTTTCCATTGTTTC. 3509
                  | | | ||  | | | || | | || |   ||   | | |    || 
hg00376   3557 TAAGAACTGTTAGGAAGAGGACTAGAAAAGGCTTCCCCTGCCTATCCTCT 3606

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mbg17696  3510 .....................AACAAATAAGACTTTGCC..CAGCATTCT 3536
                                    | | | || |||| | ||   |     ||
hg00376   3607 CCGATCACCAAGGTGGAAGGGAGCTAGTAGGACTCTTCCTTGACACACCT 3656

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mbg17696  3537 TGGAACCTAAATGTT...TAATTTTGTCATGACTTGTAGTACC..TGATG 3581
               || |  |||||||||   || | |  ||| |||||   ||| |  | |||
hg00376   3657 TGTAGTCTAAATGTTCGGTATTCTATTCAGGACTTACGGTAACTATTATG 3706

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mbg17696  3582 AGAAAGGTGTGGCTTTTCATTGCAGTATCCAGAAAGAGTCCCTTCTCTTG 3631
               ||  |||  ||||||| ||  |  |   |||| |||||  |||  |  ||
hg00376   3707 AGGGAGGCATGGCTTTCCACCGTCG.GGCCAGGAAGAGCACCTGTTGCTG 3755

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mbg17696  3632 ..GGTTCAGTG....................................... 3640
                  | ||||||                                       
hg00376   3756 CAAGCTCAGTGAAGTGGGGCACTCCCAGACCTGCCATGCAGTTTATCCTC 3805

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mbg17696  3641 .....ATGAAAATGGTTCAGATGGGCTGTTCAGATACGTCTAGGCCTG.. 3683
                    ||| || |||    || |  ||   ||| ||    | ||  ||  
hg00376   3806 TGAGAATGGAATTGGAAATGAAGACCTAACCAGCTATTGGTGGGAATGAC 3855

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mbg17696  3684 ................................................TC 3685
                                                               | 
hg00376   3856 GGAACTGGGGATTGCGATGATTGATCTGGGAACATGGCTGGATTGTGATT 3905

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mbg17696  3686 ACACAGTGTATGCTCAGGTTG............................. 3706
                 ||   | ||||| | ||||                             
hg00376   3906 TAACCAAGAATGCTGATGTTGAATTCTTTGGGCCTAGAATATACTTGAGA 3955

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mbg17696  3707 .................................................. 3707
                                                                 
hg00376   3956 AAGCACTAGTGGCTTGTGTTCAGGGAGAGGAGCTGGCAGTTTTTAACCAC 4005

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mbg17696  3707 .................................................. 3707
                                                                 
hg00376   4006 TTCTGTGGGAGCCGTGTTCTAACCTGTGGAAAGTATTGCAATTCTGTGAG 4055

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mbg17696  3707 .................................................. 3707
                                                                 
hg00376   4056 AGTGACTCTGCAGAGTCACTGCACCATCAGGCTTGGCCCTGCTGTGCCTT 4105

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mbg17696  3707 .................................................. 3707
                                                                 
hg00376   4106 CAGTACCCAGCCAGGTTCTCTGGGTCCAGGGTGACTCTCCAAAGAAATTG 4155

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mbg17696  3707 .................................................. 3707
                                                                 
hg00376   4156 GCCTTCAGCTGGAGAAAACATTGGGTGGAGACTCTCACTTATGTTAATGC 4205

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mbg17696  3707 .................................................. 3707
                                                                 
hg00376   4206 AATCTTGAAATGACTGAAAGGTAGATTGCCAGCACAGTGAGTTTCCCAGC 4255

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mbg17696  3707 ..................TTTCCAAATGAAGATCAGGGGCTGGAGACAGA 3738
                                 ||   || ||| |      | | |    | ||
hg00376   4256 CTGCTCCCCCATCCACACTTGGAAATTGAGGGAGCATGACCGCTCTCTGA 4305

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mbg17696  3739 GATCTCAGGTTAAGAGTGCTT....GCAACTTTCAGAGGACTTTAGTTTG 3784
                 || || ||||| || |  |    |||   ||  ||| |  || ||  |
hg00376   4306 CTTCACATGTTAATAGAGGATCAGAGCAGAGTTGGGAGTATATTGGTCAG 4355

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mbg17696  3785 GTTCCCAACACACATATCAA.............................. 3804
               | ||  |  | | |   |||                              
hg00376   4356 GATCATAGAAAAGAAGACAAAGCTTGCTCAGCCATGAGATGGCCAGGTAT 4405

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mbg17696  3805 ..............................................GTGG 3808
                                                              | |
hg00376   4406 CCAGTTTTGTTAACTCTCTTTGGGAATTTCTTTTTCAGCCTGTTTTTTAG 4455

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
mbg17696  3809 CTTAGAACTACCTGTACCTCCAATT.AAAGGTACTTCAGCACTCTCCTTT 3857
               |||||   | ||  ||  ||   || |   ||| |  || ||||| |   
hg00376   4456 CTTAG...TGCCATTATGTCATTTTGATTTGTATTCAAGTACTCTTCAAG 4502

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
mbg17696  3858 AGTCTTTG.CTGGCACCCGCACATACATGCAGATACCTACACGTAAATAA 3906
                 ||||||    | |        ||| || | |   || |  | |     
hg00376   4503 TATCTTTGTAATGAAGGTTTGGCTACTTGTATAGGTCTGCCTGCAGGGTG 4552

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
mbg17696  3907 AAAATCAAAAGAAGAGCATGTGGGCCA....................... 3933
               |||||   |    ||  ||    || |                       
hg00376   4553 AAAATGCCAGTGTGAATATTCTAGCTACCAAACATTGTTTTTTGTTGAAA 4602

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
mbg17696  3934 ...................................TTTTTGGGAATGACA 3948
                                                   ||| ||  ||  ||
hg00376   4603 AACTGACTTTCTGTTGTCTACCTCAGGCCTTGTGCATTTGGGTTATCTCA 4652

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
mbg17696  3949 CAACTTGAACTAGAGGTAG....TTGGCTTGGGGACAAAGCTGCACAGCA 3994
                  |    || | ||   |    | || |  |  | | ||  ||  |   
hg00376   4653 AGCCAGTCACCACAGAGGGTCTCTAGGGTCTGCAAAATAGAGGCCAAATC 4702

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
mbg17696  3995 GTAGGACCTAGAACATGGACTTGTTTGGGTCTAGAATTTACTCGGGAACA 4044
                  |||||  |  |    | | |     ||    || |  ||  || || 
hg00376   4703 CAGGGACCAGGCCCTAATAATAGAAGTTGTACCAAAATGCCTGTGGTACT 4752

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
mbg17696  4045 GTCCAGTGTATAGTGTTGATGGAGAGAAGCTGAG.GAGTTGTCTGTCCCT 4093
                    |  | | |     || |  || |   | | | | |||  |  |||
hg00376   4753 TGATGGCCTGTTGGTCAAATAGGAAGTACAAGTGTGTGATGTTAGAACCT 4802

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
mbg17696  4094 CCC............................................... 4096
               |||                                               
hg00376   4803 CCCTAGTTGCTGCTATATCAAACACTGCACACTTGACAAGTGTTTTCATT 4852

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
mbg17696  4097 .........................CATCCTTCTGGTAACCTAACCTGTA 4121
                                        | |  ||||   ||   |||| || 
hg00376   4853 CCCCGCCCTCTGACAGAACAACATTCCTAATTCTTTGAAGGCAACCAGTG 4902

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
mbg17696  4122 CAGAG............................................. 4126
               || ||                                             
hg00376   4903 CAAAGGCTACTACACTTGTGTAATGATATTTAGCAGATGCATACAGGACT 4952

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
mbg17696  4127 .................................................. 4127
                                                                 
hg00376   4953 GGATCCCAGGGCACTGTCAGTTCTTCCCTCCCTCTCGTGCTGCTCAGTTT 5002

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
mbg17696  4127 ...AGCTGCAAGCCTGTCAGAGCTGGCTCACACACCACTTCAGTGCC... 4170
                    ||||   | |||  |       |||| |  | | | ||||||   
hg00376   5003 GTCCTCTGCTCCCATGTAGGCCTAAAGTCACCCCACTCCTTAGTGCCTGC 5052

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
mbg17696  4171 .CCTGAGCACATTAGGG................................. 4186
                ||| | |||  ||  |                                 
hg00376   5053 ACCTCACCACGATATTGAGGAAGCACAGGACATCCAAGGGTACTCTCCAG 5102

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
mbg17696  4187 .................................................. 4187
                                                                 
hg00376   5103 TTTGGCTGTGGAGACTTGAGCAAGCCCTAAAGTCCCCTGCTCCCTGGACT 5152

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
mbg17696  4187 ..........................................ACTCTTAA 4194
                                                         |  || | 
hg00376   5153 TCTCCTGGGTTGTGCTTTTTTGGGGGCAACATACCTTGGACAAAGCTGAG 5202

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
mbg17696  4195 CAGCAAGCAAAGACTAAGTAGAGTCACTCATAAGTAGTGGACCCTG.... 4240
               | |  ||| ||   | | |||  ||   | |||||     ||  ||    
hg00376   5203 CTGACAGCTAATGTTTATTAGCCTCCTACCTAAGTCAGTCACTTTGCTAA 5252

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
mbg17696  4241 .................................................. 4241
                                                                 
hg00376   5253 ATTCTTCACCTGTGGTAACTCATTTTGATTGTTATAACATCTCAGCACCA 5302

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
mbg17696  4241 ..................TCTGATAACTGAGTGGCAGAGAGAAGATAGAG 4272
                                 |  |  ||||||||     | ||| |||| ||
hg00376   5303 TTATTCCCATTTTAATGATGAGGAAACTGAGT....CATAGAGGATACAG 5348

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
mbg17696  4273 ATTTCTCAAAAACAGAGCC...CTGTTGAAACTTCTACTCTGTAGTGGGC 4319
               | ||  | |||  ||||||    | || | ||  |  |       |||||
hg00376   5349 ACTTGCCCAAAGGAGAGCCAGGATTTTCACACCCCCTCCTCAAGCTGGGC 5398

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
mbg17696  4320 TTAAAGTCGTA....TGTTCACACACTTCTCAGGGTGTAA...CAGGTGG 4362
                |    ||  |    |  | | | || ||   |||||| |   ||| || 
hg00376   5399 CTGCCCTCCAAGTGCTTGTTATATACCTCCACGGGTGTCAGCCCAGATGA 5448

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
mbg17696  4363 TTCCTGCAGCTTTGA................................... 4377
                ||||    | |  |                                   
hg00376   5449 CTCCTCACCCATCCACCACCTGCAGCTTGAGATGTTAACTATTAGAGCTC 5498

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
mbg17696  4378 ....................GTGATACTTACTGAGGCCCCTTAACTTAGA 4407
                                    ||||||||||| ||            || 
hg00376   5499 CATTCTTTTGGTTCAAAACGTTGATACTTACTTAGATGTTCCCTGAGAGG 5548

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
mbg17696  4408 TGTATTAATTCCTGAGTAAGGCGCTTTAGTACATAAG............. 4444
                || || ||| |||||||||| |||||  |  |  ||             
hg00376   5549 AGTGTTTATTTCTGAGTAAGGGGCTTTGTTGAAAGAGGGGGTTAGAGAGA 5598

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
mbg17696  4445 ................GTACCCTGGCAGGAA.TAGAGAT.AGATTATTCT 4476
                               || | ||||||||||  |||||| ||| |    |
hg00376   5599 GCAAGACAGCACTTGAGTGCACTGGCAGGAAGCAGAGATAAGACTTGAAT 5648

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
mbg17696  4477 TCACGGTGTGGAGACCTGGTCCTCT...AACCGGACTTGTGAAATGTATG 4523
               |   | |  | |||||   | || |   | ||  || |||   |  | | 
hg00376   5649 TTCAGTTTGGTAGACCACCTTCTTTAGCAGCCCAACCTGTAGCAAATCTA 5698

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
mbg17696  4524 CACTAGAGGTGATGG.............TGTTCCCCCAACCTTATTGTGT 4560
                  |||     ||||             | |   |||| ||| |   | |
hg00376   5699 GTTTAGCCTGCATGGCAGGGAGAGGGATTCTCTTCCCACCCTCACCATTT 5748

          6001 ----+----*----+----*----+----*----+----*----+----* 6050
mbg17696  4561 GGATCTATC.............................AGTGCAAAAGAG 4581
               | |  |  |                             ||   ||  |||
hg00376   5749 GCAAGTGGCAGGAGCTGAGAATGCCAGTACGAGAGTGTAGCCAAAGTGAG 5798

          6051 ----+----*----+----*----+----*----+----*----+----* 6100
mbg17696  4582 CCTCTTA.AGAGAAGATGCTGTCTCAGTGTGAATTAAGTAGGCAGGCCTC 4630
                  || | ||  |||  |   | |   |  |  || ||| |     ||  
hg00376   5799 AGGCTGAGAGCAAAGGAGACATTTTTTTCAGTTTTGAGTCGAGTATCCAG 5848

          6101 ----+----*----+----*----+----*----+----*----+----* 6150
mbg17696  4631 ATTATGTGAATTTGCTTGCTTAAACTCTGTTGAAGTGTTGTATCTATACA 4680
               |    |  || |   ||  || |||| | |   |  | |||| ||||| |
hg00376   5849 ACAGAGGCAAATCATTTTGTTTAACTTTTTATTAAAG.TGTAACTATAGA 5897

          6151 ----+----*----+----*----+----*----+----*----+----* 6200
mbg17696  4681 GGC.GATCAGGGATTCTTCACAGACAGA..........ACATACATGAAT 4719
                 |  ||||  |||| ||||||    ||          |||  |   |  
hg00376   5898 AACACATCAATGATTTTTCACAAGTGGAGCACGTGCATACAATCGGCACC 5947

          6201 ----+----*----+----*----+----*----+----*----+----* 6250
mbg17696  4720 GCAGAAGCC.....AGAGGTTCCCTT....TTGCCTACTATTTCTTCCAC 4760
                ||||||||       || |||||||    ||  ||||   | |      
hg00376   5948 CCAGAAGCCCCCCGTCAGATTCCCTTCCAGTTAACTACCTCTCCAAGGGA 5997

          6251 ----+----*----+----*----+----*----+----*----+----* 6300
mbg17696  4761 AGCCACCATCC..ACTTTTAAGC...AAAATCCATTTCATCTGGCTT... 4802
               | |||| ||||  | || |||||    | ||   ||   ||||| ||   
hg00376   5998 AACCACTATCCTGAGTTCTAAGCGCATAGATTAGTTCTGTCTGGTTTGGG 6047

          6301 ----+----*----+----*----+----*----+----*----+----* 6350
mbg17696  4803 GAAATATGTGAAATAAAATAAAAAATACGTTCCTTGGCTTTCACTCGGC. 4851
               || |||| | ||   || ||   | |       |  | ||||  |   | 
hg00376   6048 GAGATATATAAATGGAATTATGCATTCTTCGTATCTGGTTTCTTTTCACC 6097

          6351 ----+----*----+----*----+----*----+----*----+----* 6400
mbg17696  4852 .....AGTGTTCATGAGACTCTTATTCTCAATAGCTGTACAT...TGTTC 4893
                      ||||  ||||| | || ||     ||  |||||||   | |||
hg00376   6098 AATATTATGTTTGTGAGATTTTTGTTGCATGTATTTGTACATGGATTTTC 6147

          6401 ----+----*----+----*----+----*----+----*----+----* 6450
mbg17696  4894 ATTCTCATGATTGTACAGTA.TTCCGTGTATGAATAAACAACATTATAC. 4941
               ||||||||| ||||| | || |||  ||| ||||||||| ||||  |   
hg00376   6148 ATTCTCATGGTTGTATAATATTTCATTGTGTGAATAAACCACATACTGTT 6197

          6451 ----+- 6456
mbg17696  4942 ...... 4942
                     
hg00376   6198 TATCTG 6203