FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0145.ptfa, 1039 aa vs ./tmplib.26680 library 1767978 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.7043+/-0.00503; mu= 13.6830+/- 0.336 mean_var=121.0049+/-28.556, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.1166 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4131 ( 789 res) mid35078 ( 789) 542 103 1.8e-22 mKIAA0718 ( 769 res) mbg07395 ( 769) 460 89 2.5e-18 mKIAA1022 ( 1128 res) mbp08192 (1128) 210 47 1.5e-05 mKIAA1650 ( 856 res) mbg18106 ( 856) 177 42 0.00058 mKIAA0902 ( 1058 res) mbg09814 (1058) 159 39 0.0055 >>mKIAA4131 ( 789 res) mid35078 (789 aa) initn: 1036 init1: 420 opt: 542 Z-score: 495.7 bits: 102.9 E(): 1.8e-22 Smith-Waterman score: 667; 40.068% identity (45.000% ungapped) in 292 aa overlap (2-277:289-564) 10 20 30 mKIAA0 EVLSGVTSHGLSCEVCKFKAHKRCAVRATSN .: :: ..:: : ::. .:.::. .. . mKIAA4 MDDSGSKGDGRHAWTLKHFKKPTYCNFCRAMLMGVGKQGLCCIYCKYTVHQRCVSKTIHG 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA0 CKWTTLASIGKDIIEDEDGIAMPHQWLEGNLPVSAKCIVCDKTCGSVLRLQDWRCLWCKA : :. : .: ..: .: : :.::: :.:: : :. . .:.::. mKIAA4 CVKTN--SKAK-----RSGEVMQHAWVEGN--SSVKCDRCHKSIKCYQSVTARHCVWCRM 320 330 340 350 360 100 110 120 130 mKIAA0 MVHTSCKESLVMKCPLGLCKVSVIPPTALNSID-------SDGFWKAT---------CPP : .:. : : : : : .. ::.. .. ::: : : mKIAA4 TFHRKCELSTV--CDGGELKDHILLPTSICPVSGDRQGGKSDGSVAAKGELVTQYKIIPS 370 380 390 400 410 420 140 150 160 170 180 190 mKIAA0 SCTSPLLVFVNSKSGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDTFRILV : ::::.:: ::: :: ..::.:. :::: :::.: :::: :: .:. ::.:. mKIAA4 PGTHPLLVLVNPKSGGRQGERILRKFHYLLNPEQVFNLDNGGPTPGLNFFHDTPDFRVLA 430 440 450 460 470 480 200 210 220 230 240 250 mKIAA0 CGGDGSVGWVLSEIDSLNLHKQCQLGVLPLGTGNDLARVLGWGSACDDDTQLPQILAKLE :::::.:::.:. ::. :. :. ..:::::::::::: : ::.. . . : .:: ..: mKIAA4 CGGDGTVGWILDCIDKANFTKHPPVAVLPLGTGNDLARCLRWGGGYEGGS-LTKILKEIE 490 500 510 520 530 540 260 270 280 290 300 310 mKIAA0 RASTKMLDRWSVMAYETKLPRQASSSTVTEDFSEDSEVQQILFYEDSVAAHLSKILTSDQ .. ::::: : .::. mKIAA4 QSPLVMLDRW----YLEVMPREEVENGDQVPYNIMNNYFSIGVDASIAHRFHMMREKHPE 550 560 570 580 590 600 >>mKIAA0718 ( 769 res) mbg07395 (769 aa) initn: 1028 init1: 413 opt: 460 Z-score: 421.3 bits: 89.1 E(): 2.5e-18 Smith-Waterman score: 633; 36.364% identity (44.094% ungapped) in 308 aa overlap (2-265:230-527) 10 20 30 mKIAA0 EVLSGVTSHGLSCEVCKFKAHKRCAVRATSN .: :: ..:: : ::. .:.::..:: . mKIAA0 GLENNVKDDGQHVWRLKHFNKPAYCNLCLNMLIGVGKQGLCCSFCKYTVHERCVARAPPS 200 210 220 230 240 250 40 50 60 70 80 90 mKIAA0 CKWTTLASIGKDIIEDEDGIAMPHQWLEGNLPVSAKCIVCDKTCGSVLRLQDWRCLWCKA : : . : .. : .: : :.::: :. :: : :: : .:.::.. mKIAA0 CIKTYVKSK-----KNTD--VMHHYWVEGNCPT--KCDKCHKTVKCYQGLTGLHCVWCQT 260 270 280 290 300 310 100 110 120 mKIAA0 MVHTSCKESLVMKCPLGLCKVSVIPPTAL------------------------------- .:..: : .: : : ..:::.. mKIAA0 TLHNKCASHLKPECDCGPLKDHILPPTTICPVVLTMPSAGASVPEERQSTAKKEKSSSQQ 320 330 340 350 360 370 130 140 150 160 mKIAA0 -------------NSIDSDGFWKATCPPSCTSPLLVFVNSKSGDNQGVKFLRRFKQLLNP ::. :: : : ::::::: ::: .:: .. :.:. :::: mKIAA0 PNKATDKNKMQRANSVTMDGQGLQITPVPGTHPLLVFVNPKSGGKQGERIYRKFQYLLNP 380 390 400 410 420 430 170 180 190 200 210 220 mKIAA0 AQVFDLMNGGPHLGLRLFQKFDTFRILVCGGDGSVGWVLSEIDSLNLHKQCQLGVLPLGT ::..: ..:: ::..:. ::.:.:::::.:::.:. :.. :. :. ...::::: mKIAA0 RQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVVKHPPVAILPLGT 440 450 460 470 480 490 230 240 250 260 270 280 mKIAA0 GNDLARVLGWGSACDDDTQLPQILAKLERASTKMLDRWSVMAYETKLPRQASSSTVTEDF :::::: : ::.. . .. : .:: .: .. :::::. mKIAA0 GNDLARCLRWGGGYEGEN-LMKILKDIESSTEIMLDRWKFEVTPNDKDEKGDPVPYSIIN 500 510 520 530 540 290 300 310 320 330 340 mKIAA0 SEDSEVQQILFYEDSVAAHLSKILTSDQHSVVISSAKVLCETVKDFVARVGKAYEKTTES mKIAA0 NYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVEIEC 550 560 570 580 590 600 >>mKIAA1022 ( 1128 res) mbp08192 (1128 aa) initn: 240 init1: 202 opt: 210 Z-score: 192.0 bits: 47.3 E(): 1.5e-05 Smith-Waterman score: 210; 50.769% identity (50.769% ungapped) in 65 aa overlap (966-1030:1061-1125) 940 950 960 970 980 990 mKIAA0 RSRSGKFRLVTKFKKEKNNKNKEVHSNLGGPVHLWGTEEVAAWLEHLSLCEYKDIFTRHD ::::: .:: ::: :.: :.:. : .. mKIAA1 LFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFMDNE 1040 1050 1060 1070 1080 1090 1000 1010 1020 1030 mKIAA0 IRGSELLHLERRDLKDLGVTKVGHMKRILCGIKELSRSSPAAEA : ::.: .:...:: :::::.::: : ..:.: mKIAA1 IDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR 1100 1110 1120 >>mKIAA1650 ( 856 res) mbg18106 (856 aa) initn: 250 init1: 170 opt: 177 Z-score: 163.5 bits: 41.6 E(): 0.00058 Smith-Waterman score: 177; 39.706% identity (39.706% ungapped) in 68 aa overlap (966-1033:789-856) 940 950 960 970 980 990 mKIAA0 RSRSGKFRLVTKFKKEKNNKNKEVHSNLGGPVHLWGTEEVAAWLEHLSLCEYKDIFTRHD :..::. .:. ::: . : :..: : :. mKIAA1 RSRSPSPSPLPSPSPGSGPSAGPRRPFQQKPLQLWSKFDVGDWLESIHLGEHRDRFEDHE 760 770 780 790 800 810 1000 1010 1020 1030 mKIAA0 IRGSELLHLERRDLKDLGVTKVGHMKRILCGIKELSRSSPAAEA :.:..: : ..:. .::::.::: : ....:. : mKIAA1 IEGAHLPALTKEDFVELGVTRVGHRMNIERALRQLDGS 820 830 840 850 >>mKIAA0902 ( 1058 res) mbg09814 (1058 aa) initn: 111 init1: 83 opt: 159 Z-score: 146.0 bits: 38.7 E(): 0.0055 Smith-Waterman score: 159; 35.821% identity (36.923% ungapped) in 67 aa overlap (966-1030:82-148) 940 950 960 970 980 990 mKIAA0 RSRSGKFRLVTKFKKEKNNKNKEVHSNLGGPVHLWGTEEVAAWLEHLSLC--EYKDIFTR :: :. .:. :.. :. : .: : : mKIAA0 RAQRAADLAFCPSSASHAAPTPPPMALIMEPVSKWSPSQVVDWMKGLDDCLQQYIKNFER 60 70 80 90 100 110 1000 1010 1020 1030 mKIAA0 HDIRGSELLHLERRDLKDLGVTKVGHMKRILCGIKELSRSSPAAEA . : :..::.. ...:.::::...::.. :: .. : mKIAA0 EKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCALNYGLETENLKTLSHKLNASA 120 130 140 150 160 170 mKIAA0 KNLQNFITGRRRSGHYDGRTSRKLPNDFLTSVVDLIGAAKSLLAWLDRSPFAAVTDYSVT 180 190 200 210 220 230 1039 residues in 1 query sequences 1767978 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:13:07 2006 done: Mon Mar 27 10:13:08 2006 Scan time: 1.080 Display time: 0.150 Function used was FASTA [version 3.4t11 Apr 17, 2002]