FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1067.ptfa, 683 aa vs ./tmplib.26680 library 1768334 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.4406+/-0.00498; mu= 13.1203+/- 0.333 mean_var=119.1063+/-27.108, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.1175 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0336 ( 1693 res) mbg01823 (1693) 162 39 0.0036 >>mKIAA0336 ( 1693 res) mbg01823 (1693 aa) initn: 48 init1: 48 opt: 162 Z-score: 149.4 bits: 39.4 E(): 0.0036 Smith-Waterman score: 168; 20.384% identity (23.390% ungapped) in 677 aa overlap (19-644:808-1448) 10 20 30 40 mKIAA1 LKQRGVGTALSAAMIPPQEASARRREIEDKLK--------QEEETLSF : .:: :.:.:.: : :: .. mKIAA0 ENEEEDVVKLIQAVGESLVKVKEEEHNLVFEYDARVLELENKIKCLQEDSAVQCEELRTL 780 790 800 810 820 830 50 60 70 80 90 100 mKIAA1 IRDSLEKSDQLTRNMVSILSSFESRLMKLENSIIPVHKQTENLQRLQENVEKTLSCLDHV .::: ... : ... .. :. :. . : . .: . . : :. .::. :: : mKIAA0 VRDSEQEKILLRKELDAVTSAKEALQLDLLEMKNTNEKASLENQTLSTQVEE-LSQTLHS 840 850 860 870 880 890 110 120 130 140 150 mKIAA1 ISYYHVASDTEKIIREGPTGRL--EEYLGSMAKIQKAVEYFQDNSPDSP----ELNKVKL . : : . .. : . :: .. . . .. . ..:. :: .:. :: mKIAA0 RNEVH---DEKVLVIEHENLRLLLKQRESELQDVRAELILLKDSLEKSPSVKDQLSLVKE 900 910 920 930 940 950 160 170 180 190 200 mKIAA1 LFERGKESLESEFRSLMTRHSKV----VSPVLLLDLISAD-----DELEV---QEDVVLE : :. ::::.: .. . ::. :. :: . .::: ..: . mKIAA0 LEEK-IESLEKESKDKDEKISKIKLVAVKAKKELDSNRKEAQTLREELESVRSEKDRLSA 960 970 980 990 1000 1010 210 220 230 240 250 260 mKIAA1 HLPESVLRDVVRISRWLVEYGRNQDFMNVYYQIRSSQLDRSIKGLKEHFRKSSSSSGVPY . : :. . . :.:: .... ..: . :. ...: :. : ...:.:. . : mKIAA0 SMKE-FLQGAESYKSLLLEYDKQSEQLDVEKE-RAHNFERHIEDLTKQLRNSTCQ----Y 1020 1030 1040 1050 1060 270 280 290 300 310 320 mKIAA1 SPAIPNKRKDTPTKKPIKRPGVPLGRDDMLDVETDAYIHCVSAFVKLAQSEYRLLMEIIP . . .: .. . .. : . ..:.:. . : .: : . mKIAA0 E-RLTSDNEDLLARIETLQANAKLLEAQILEVQKAKGV-----------VEKELDAEELQ 1070 1080 1090 1100 1110 330 340 350 360 370 mKIAA1 EHHQKKTFDSLIQDALDGLMLEGENIVSAARKAI-----IRHDFS-TVLTVFPILRHLKQ .... : : ... :. :.:. .. . .:.. ...: . :.: . : . . mKIAA0 KEQKIKEHVSTVNE-LEELQLQFQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERL 1120 1130 1140 1150 1160 1170 380 390 400 410 420 430 mKIAA1 TKPEFDQVL---QGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKD-- : :..: : ..: . .... ..::. . . .. ..... .:. .. . mKIAA0 MK-ELNQKLTNKNSTIEDLEQEMKIQKEKQETL-QEEITSLQSSVQHYEEKNTKIKQLLV 1180 1190 1200 1210 1220 1230 440 450 460 470 480 mKIAA1 GTVHELTSNAILFLQQLLDFQETAGAMLASQVLGDTYNIPL----DPRETSSSATSYSSE : .::.. ..:: : . ::: ..:.: : . .. . :.: mKIAA0 KTKKELADAKQAETDHLLLQASLKGELEASQQQVEVYKIQLAEMTSEKHKIHEHLKTSAE 1240 1250 1260 1270 1280 1290 490 500 510 520 530 540 mKIAA1 FSKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAV .: ::.: .:.. :: . :.. :. :... : ..:. .... :.. . :. mKIAA0 QHQRTLSAYQQRVVA-LQEE--SRAAKAEQAAVTSEF--ESYKVRVHNVLKQQKNKSVSQ 1300 1310 1320 1330 1340 550 560 570 580 590 mKIAA1 TQKTAERSYREHIEQ-------QIQTYQRS-WLKVTDYIAEKNLPVFQPGVKLRDKERQM .. . .. :::.:. ..: : : ..:..: ..: . . : ... .: mKIAA0 VETEGAKQEREHLEMLIDQLKIKLQDSQNSLQISVSEY---QTLQAEHD--TLLERHNRM 1350 1360 1370 1380 1390 1400 600 610 620 630 640 650 mKIAA1 IKERFKGFNDGLEELCKIQKVWAIPDTEQRDKIRQ--AQKDIVKETYGAFLHRYGSVPFT ..: . :.::..:. .. .:. . . : .:.. .. .. mKIAA0 LQETVTKEAELREKLCSVQSENTMMKSEHSQTMCQLTSQNEALRTSFRDQVRHLQDEHRK 1410 1420 1430 1440 1450 1460 660 670 680 mKIAA1 KNPEKYIKYRVEQVGDMIDRLFDTSA mKIAA0 TVETLQHQLSKLEAQLFQLKSEPSTRSPASSHQPSKSLRERRTTDLPLLDMHTVAREEGE 1470 1480 1490 1500 1510 1520 683 residues in 1 query sequences 1768334 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:35:16 2006 done: Mon Mar 27 10:35:17 2006 Scan time: 0.840 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]