FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00012.ptfa, 454 aa vs ./tmplib.26680 library 1768563 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.8657+/-0.00553; mu= 10.5048+/- 0.370 mean_var=162.2101+/-37.785, 0's: 0 Z-trim: 10 B-trim: 0 in 0/36 Lambda= 0.1007 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00045 ( 612 res) mfj40199 ( 612) 327 59 7.8e-10 mKIAA4167 ( 342 res) mpj04828 ( 342) 189 39 0.0006 mKIAA4123 ( 639 res) mbg05860 ( 639) 178 38 0.0026 mKIAA0696 ( 555 res) mbh00867 ( 555) 177 38 0.0027 >>mFLJ00045 ( 612 res) mfj40199 (612 aa) initn: 777 init1: 318 opt: 327 Z-score: 268.9 bits: 59.4 E(): 7.8e-10 Smith-Waterman score: 655; 30.337% identity (39.225% ungapped) in 534 aa overlap (27-454:20-538) 10 20 30 40 50 60 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKA :::::...::.::: :. : :.. :..::::. mFLJ00 GAGAAFGMSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYTKLLEKS 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 ELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVKWQQEKKGLQLVCGE .: . ...::..: .: . .::: . .. . .:.. :.::.: :.: :. :: mFLJ00 DLHSVLTQKLQAEKHD-MPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGE 60 70 80 90 100 110 130 140 mFLJ00 MAYQVV------------------KKSAALDT----------LQSQLEERQ-------DR .: :. : : :.: :...:.. . :. mFLJ00 LAQLVIDLNNQMQQKDKEIQMNEAKISEYLQTISDLETNCLDLRTKLQDLEVANQTLKDE 120 130 140 150 160 170 150 160 170 180 190 mFLJ00 LEALQACVVQLQEA---RAQQSRQLEER-QAENAAQRAACAAAN-------QALVSQELK .::: . :.: ......: : .::.: . : : :: ...:: mFLJ00 YDALQITFTALEEKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELA 180 190 200 210 220 230 200 210 220 230 240 250 mFLJ00 KAAKRTVSISEIPN--TLEDGTKEETVALAPAALPEFSESETCEKWKRPFSFKKRRGHSV .:::. . . . . .. : :...: .:. :.. : ::. : mFLJ00 EAAKEPLPVEQDDDIEVIVDETSDHTEETSPVR--AVSRAAT------------RRSVSS 240 250 260 270 260 270 280 290 300 310 mFLJ00 GGAPEQRYQSIPVC-VSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWN .:.. ... :. ....:. :. :.::: .::::: :.:.: :::::: :: ..::. mFLJ00 IPVPQDIMDTHPASGKDVRVPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWE 280 290 300 310 320 330 320 330 340 350 mFLJ00 VVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVG-------------- . : . : . .: :....:::..:: .:. .:::. . :...: : mFLJ00 AFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGK 340 350 360 370 380 390 360 370 mFLJ00 ---------------------------------ETQS----------KGSRTINVLSYCN : :: .: .:. . : :: mFLJ00 VLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCEEMQSLCVLMVFGFLSGIKTVFAGSSCN 400 410 420 430 440 450 380 390 400 410 420 430 mFLJ00 DVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLK :.:: .. ..::: :.:::::: :. .. . . :..:.: :. .. .:::::::. :: mFLJ00 DIVCTEQCVMSGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLK 460 470 480 490 500 510 440 450 mFLJ00 VIDLRISNIRQVFRADGFKC ::::: . ..:.: : :::: mFLJ00 VIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLS 520 530 540 550 560 570 >>mKIAA4167 ( 342 res) mpj04828 (342 aa) initn: 179 init1: 97 opt: 189 Z-score: 163.3 bits: 39.0 E(): 0.0006 Smith-Waterman score: 238; 24.118% identity (26.452% ungapped) in 170 aa overlap (276-437:88-250) 250 260 270 280 290 300 mFLJ00 KRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADR . .: .: :.. : .. .:: :.... :. mKIAA4 SVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDK 60 70 80 90 100 110 310 320 330 340 350 360 mFLJ00 LIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKGSR ...:.. .:. .::.: . . ::.: .. ............:.: : .. mKIAA4 TLKVWDMRSGKCL--KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV-----KTGK 120 130 140 150 160 170 370 380 390 400 410 mFLJ00 TINVLSYCNDVV------CGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGR--VTSLHL ...:: .: . :. .:.:: : :.::. . .:.... .: :. ... mKIAA4 CLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKF 180 190 200 210 220 230 420 430 440 450 mFLJ00 SYDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC : . ..:. . :::::. : mKIAA4 SPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNM 240 250 260 270 280 290 >>mKIAA4123 ( 639 res) mbg05860 (639 aa) initn: 118 init1: 74 opt: 178 Z-score: 151.8 bits: 37.8 E(): 0.0026 Smith-Waterman score: 178; 23.490% identity (25.362% ungapped) in 149 aa overlap (294-438:426-567) 270 280 290 300 310 320 mFLJ00 PVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGR-LEANQT :.....: . :: : .:.... . .. mKIAA4 DSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 400 410 420 430 440 450 330 340 350 360 370 mFLJ00 LEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKGSRTINVLSYCNDVVC---G : : .... :::: . ...:. ... ..:... . ::.: .. ..: mKIAA4 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEF--VRTLN--GHKRGIACLQYR 460 470 480 490 500 380 390 400 410 420 430 mFLJ00 DHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLR :....:: .:. ::.:: . :..:. . ... . .:. ...: . :. .:: :: mKIAA4 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC-IRFDNKRIVSGAYDGKIKVWDLM 510 520 530 540 550 560 440 450 mFLJ00 ISNIRQVFRADGFKC mKIAA4 AALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAHAEPPR 570 580 590 600 610 620 >>mKIAA0696 ( 555 res) mbh00867 (555 aa) initn: 114 init1: 74 opt: 177 Z-score: 151.6 bits: 37.6 E(): 0.0027 Smith-Waterman score: 177; 23.333% identity (25.180% ungapped) in 150 aa overlap (294-439:342-484) 270 280 290 300 310 320 mFLJ00 PVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGR-LEANQT ...:..: . :: : .:..... . .. mKIAA0 DSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRV 320 330 340 350 360 370 330 340 350 360 370 mFLJ00 LEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKGSRTINVLSYCNDVVC---G : : .... :::: . ...:. ... ..:... . ::.: .. ..: mKIAA0 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEF--VRTLN--GHKRGIACLQYR 380 390 400 410 420 380 390 400 410 420 430 mFLJ00 DHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLR :....:: .:. ::.:: . :..:. . ... . .:. ...: . :. .:: ::. mKIAA0 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC-IRFDNKRIVSGAYDGKIKVWDLQ 430 440 450 460 470 480 440 450 mFLJ00 ISNIRQVFRADGFKC mKIAA0 AALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETR 490 500 510 520 530 540 454 residues in 1 query sequences 1768563 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:06:02 2006 done: Mon Mar 27 10:06:03 2006 Scan time: 0.650 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]