# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg15561.fasta.nr -Q ../query/mFLJ00012.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00012, 454 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7911685 sequences Expectation_n fit: rho(ln(x))= 5.4261+/-0.000191; mu= 10.6799+/- 0.011 mean_var=92.3655+/-18.029, 0's: 32 Z-trim: 78 B-trim: 467 in 2/64 Lambda= 0.133450 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847374|dbj|BAD21359.1| mFLJ00012 protein [Mus ( 454) 3017 590.9 2.2e-166 gi|148684548|gb|EDL16495.1| mCG6774, isoform CRA_b ( 484) 1238 248.4 2.9e-63 gi|148684551|gb|EDL16498.1| mCG6774, isoform CRA_e ( 626) 1238 248.5 3.5e-63 gi|148684549|gb|EDL16496.1| mCG6774, isoform CRA_c ( 473) 1222 245.3 2.4e-62 gi|37805293|gb|AAH60054.1| Atg16l2 protein [Mus mu ( 477) 1196 240.3 7.8e-61 gi|149068744|gb|EDM18296.1| rCG40272, isoform CRA_ ( 492) 1187 238.6 2.6e-60 gi|149068743|gb|EDM18295.1| rCG40272, isoform CRA_ ( 362) 1172 235.6 1.6e-59 gi|189027649|sp|Q6KAU8.2|A16L2_MOUSE RecName: Full ( 623) 1133 228.3 4.2e-57 gi|149068742|gb|EDM18294.1| rCG40272, isoform CRA_ ( 351) 1001 202.7 1.2e-49 gi|148684547|gb|EDL16494.1| mCG6774, isoform CRA_a ( 410) 851 173.8 6.9e-41 gi|73988189|ref|XP_542323.2| PREDICTED: similar to ( 614) 838 171.5 5.2e-40 gi|109107693|ref|XP_001110048.1| PREDICTED: simila ( 627) 823 168.6 3.9e-39 gi|21748789|dbj|BAC03485.1| unnamed protein produc ( 513) 818 167.6 6.6e-39 gi|119595283|gb|EAW74877.1| ATG16 autophagy relate ( 513) 817 167.4 7.6e-39 gi|189027648|sp|Q8NAA4.2|A16L2_HUMAN RecName: Full ( 619) 817 167.5 8.7e-39 gi|21751745|dbj|BAC04021.1| unnamed protein produc ( 619) 817 167.5 8.7e-39 gi|33874499|gb|AAH36713.1| ATG16L2 protein [Homo s ( 542) 814 166.8 1.2e-38 gi|76636041|ref|XP_588289.2| PREDICTED: similar to ( 616) 792 162.6 2.4e-37 gi|119595281|gb|EAW74875.1| ATG16 autophagy relate ( 374) 779 159.9 9.6e-37 gi|52545744|emb|CAH56355.1| hypothetical protein [ ( 323) 769 158.0 3.3e-36 gi|10440355|dbj|BAB15713.1| FLJ00012 protein [Homo ( 182) 728 149.8 5.1e-34 gi|119595282|gb|EAW74876.1| ATG16 autophagy relate ( 275) 718 148.1 2.6e-33 gi|90077404|dbj|BAE88382.1| unnamed protein produc ( 348) 649 134.9 3.1e-29 gi|149535215|ref|XP_001512513.1| PREDICTED: simila ( 345) 561 117.9 3.9e-24 gi|83318404|gb|AAI08673.1| ATG16L2 protein [Homo s ( 111) 464 98.8 7.2e-19 gi|194381966|dbj|BAG64352.1| unnamed protein produ ( 126) 464 98.9 7.9e-19 gi|114583980|ref|XP_001149514.1| PREDICTED: APG16 ( 428) 454 97.4 7.2e-18 gi|109101512|ref|XP_001114716.1| PREDICTED: ATG16 ( 428) 453 97.2 8.3e-18 gi|34529521|dbj|BAC85713.1| unnamed protein produc ( 428) 453 97.2 8.3e-18 gi|189518561|ref|XP_001345780.2| PREDICTED: simila ( 608) 442 95.3 4.6e-17 gi|72679943|gb|AAI00115.1| Unknown (protein for IM ( 236) 414 89.5 9.8e-16 gi|47216472|emb|CAG02123.1| unnamed protein produc ( 640) 414 89.9 2e-15 gi|126314291|ref|XP_001373496.1| PREDICTED: simila ( 607) 407 88.5 4.9e-15 gi|194211429|ref|XP_001915817.1| PREDICTED: simila ( 584) 406 88.3 5.5e-15 gi|73993996|ref|XP_534608.2| PREDICTED: similar to ( 588) 405 88.1 6.3e-15 gi|194665159|ref|XP_877095.3| PREDICTED: similar t ( 588) 405 88.1 6.3e-15 gi|73993994|ref|XP_850664.1| PREDICTED: similar to ( 607) 405 88.1 6.5e-15 gi|73993998|ref|XP_862068.1| PREDICTED: similar to ( 623) 405 88.1 6.6e-15 gi|224059940|ref|XP_002197297.1| PREDICTED: ATG16 ( 588) 404 87.9 7.2e-15 gi|224059938|ref|XP_002197316.1| PREDICTED: ATG16 ( 607) 404 87.9 7.4e-15 gi|118094820|ref|XP_422568.2| PREDICTED: similar t ( 607) 404 87.9 7.4e-15 gi|114583982|ref|XP_001149307.1| PREDICTED: APG16 ( 266) 397 86.3 1e-14 gi|18677038|dbj|BAB85082.1| unnamed protein produc ( 293) 397 86.3 1.1e-14 gi|55824674|gb|AAH86465.1| LOC495838 protein [Xeno ( 322) 396 86.1 1.4e-14 gi|80476904|gb|AAI08837.1| LOC495838 protein [Xeno ( 349) 396 86.2 1.4e-14 gi|125656330|gb|ABN48555.1| ATG16 autophagy relate ( 444) 397 86.5 1.5e-14 gi|114583978|ref|XP_001149723.1| PREDICTED: APG16 ( 444) 397 86.5 1.5e-14 gi|119591444|gb|EAW71038.1| ATG16 autophagy relate ( 463) 397 86.5 1.5e-14 gi|114583976|ref|XP_001149789.1| PREDICTED: APG16 ( 463) 397 86.5 1.5e-14 gi|48735323|gb|AAH71846.1| ATG16L1 protein [Homo s ( 475) 397 86.5 1.6e-14 >>gi|47847374|dbj|BAD21359.1| mFLJ00012 protein [Mus mus (454 aa) initn: 3017 init1: 3017 opt: 3017 Z-score: 3143.6 bits: 590.9 E(): 2.2e-166 Smith-Waterman score: 3017; 100.000% identity (100.000% similar) in 454 aa overlap (1-454:1-454) 10 20 30 40 50 60 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKA 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 ELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVKWQQEKKGLQLVCGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 ELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVKWQQEKKGLQLVCGE 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 MAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQLEERQAENAAQRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 MAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQLEERQAENAAQRAA 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 CAAANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 CAAANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ 310 320 330 340 350 360 370 380 390 400 410 420 mFLJ00 SKGSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 SKGSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYD 370 380 390 400 410 420 430 440 450 mFLJ00 QLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC :::::::::::::::::::::::::::::::::: gi|478 QLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC 430 440 450 >>gi|148684548|gb|EDL16495.1| mCG6774, isoform CRA_b [Mu (484 aa) initn: 1228 init1: 1192 opt: 1238 Z-score: 1292.1 bits: 248.4 E(): 2.9e-63 Smith-Waterman score: 2271; 81.498% identity (83.700% similar) in 454 aa overlap (1-402:15-463) 10 20 30 40 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALF :::::::::::::::::::::::::::::::::::::::::::::: gi|148 MESPGGSAPLLGLELCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALF 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 LELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVK 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 WQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQ 130 140 150 160 170 180 170 180 mFLJ00 LEERQAENAAQRAA-----------------------------------CAA-------- :::::::::::: : :: gi|148 LEERQAENAAQREAYETLLQQAVHQEAALRRLQEEARDLLEQLVQRKARAAAERNLRNER 190 200 210 220 230 240 190 200 210 220 230 240 mFLJ00 ---ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RERANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR 250 260 270 280 290 300 250 260 270 280 290 300 mFLJ00 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT 310 320 330 340 350 360 310 320 330 340 350 360 mFLJ00 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ 370 380 390 400 410 420 370 380 390 400 410 mFLJ00 SKGSRTINVLSYCNDVVCGD------HIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTS :: ..:: .: : . : ..: :. .. :: .: gi|148 SK-----ETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCEAQSHLPPALSH 430 440 450 460 470 420 430 440 450 mFLJ00 LHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC gi|148 RGPYLAMLW 480 >>gi|148684551|gb|EDL16498.1| mCG6774, isoform CRA_e [Mu (626 aa) initn: 1811 init1: 1192 opt: 1238 Z-score: 1290.7 bits: 248.5 E(): 3.5e-63 Smith-Waterman score: 2785; 83.704% identity (83.704% similar) in 540 aa overlap (1-454:15-554) 10 20 30 40 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALF :::::::::::::::::::::::::::::::::::::::::::::: gi|148 MESPGGSAPLLGLELCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALF 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 LELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVK 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 WQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQ 130 140 150 160 170 180 170 180 mFLJ00 LEERQAENAAQRAA-----------------------------------CAA-------- :::::::::::: : :: gi|148 LEERQAENAAQREAYETLLQQAVHQEAALRRLQEEARDLLEQLVQRKARAAAERNLRNER 190 200 210 220 230 240 190 200 210 220 230 240 mFLJ00 ---ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RERANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR 250 260 270 280 290 300 250 260 270 280 290 300 mFLJ00 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT 310 320 330 340 350 360 310 320 330 340 350 360 mFLJ00 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ 370 380 390 400 410 420 370 380 mFLJ00 SK------------------------GSR----------------TINVLSYCNDVVCGD :: ::: ::::::::::::::: gi|148 SKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGD 430 440 450 460 470 480 390 400 410 420 430 440 mFLJ00 HIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRI 490 500 510 520 530 540 450 mFLJ00 SNIRQVFRADGFKC :::::::::::::: gi|148 SNIRQVFRADGFKCSSDWTKAVFSPDRSYALAGSSNGDLYIWDVNTGKLETSLQGPHCTA 550 560 570 580 590 600 >>gi|148684549|gb|EDL16496.1| mCG6774, isoform CRA_c [Mu (473 aa) initn: 2201 init1: 1192 opt: 1222 Z-score: 1275.6 bits: 245.3 E(): 2.4e-62 Smith-Waterman score: 2172; 79.075% identity (81.278% similar) in 454 aa overlap (1-402:15-452) 10 20 30 40 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALF :::::::::::::::::::::::::::::::::::::::::::::: gi|148 MESPGGSAPLLGLELCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALF 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 LELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVK 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 WQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQ 130 140 150 160 170 180 170 180 mFLJ00 LEERQAENAAQRAA-----------------------------------CAA-------- :::::::::::: : :: gi|148 LEERQAENAAQREAYETLLQQAVHQEAALRRLQEEARDLLEQLVQRKARAAAERNLRNER 190 200 210 220 230 240 190 200 210 220 230 240 mFLJ00 ---ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RERANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKR 250 260 270 280 290 300 250 260 270 280 290 300 mFLJ00 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLAT 310 320 330 340 350 360 310 320 330 340 350 360 mFLJ00 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQ :::::::::::::::::::::::::::::::::::::: ::::::::::: gi|148 GGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPS-----------AAQLWKVGETQ 370 380 390 400 370 380 390 400 410 mFLJ00 SKGSRTINVLSYCNDVVCGD------HIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTS :: ..:: .: : . : ..: :. .. :: .: gi|148 SK-----ETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCEAQSHLPPALSH 410 420 430 440 450 460 420 430 440 450 mFLJ00 LHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC gi|148 RGPYLAMLW 470 >>gi|37805293|gb|AAH60054.1| Atg16l2 protein [Mus muscul (477 aa) initn: 1816 init1: 1192 opt: 1196 Z-score: 1248.5 bits: 240.3 E(): 7.8e-61 Smith-Waterman score: 2035; 82.716% identity (82.963% similar) in 405 aa overlap (1-338:65-469) 10 20 30 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRH :::::::::::::::::::::::::::::: gi|378 SAWYSPGIPRCCRPDVMESPGGSAPLLGLELCAAARDSAAMAGPGAPCDPCAPAAVWKRH 40 50 60 70 80 90 40 50 60 70 80 90 mFLJ00 IVRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|378 IVRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVS 100 110 120 130 140 150 100 110 120 130 140 150 mFLJ00 GTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|378 GTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQ 160 170 180 190 200 210 160 170 180 mFLJ00 ACVVQLQEARAQQSRQLEERQAENAAQRAA------------------------------ :::::::::::::::::::::::::::: : gi|378 ACVVQLQEARAQQSRQLEERQAENAAQREAYETLLQQAVHQEAALRRLQEEARDLLEQLV 220 230 240 250 260 270 190 200 210 220 mFLJ00 -----CAA-----------ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPA :: ::::::::::::::::::::::::::::::::::::::::: gi|378 QRKARAAAERNLRNERRERANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPA 280 290 300 310 320 330 230 240 250 260 mFLJ00 ALPEFSESETCEKWKRPF---------------------SFKKRRGHSVGGAPEQRYQSI :::::::::::::::::: .:::::::::::::::::::: gi|378 ALPEFSESETCEKWKRPFRSASATSLTLSRCVDVVKGLLDFKKRRGHSVGGAPEQRYQSI 340 350 360 370 380 390 270 280 290 300 310 320 mFLJ00 PVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|378 PVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTL 400 410 420 430 440 450 330 340 350 360 370 380 mFLJ00 EGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKGSRTINVLSYCNDVVCGDHII ::::::::::::::: gi|378 EGAGGSITSVDFDPSVRRLCPTA 460 470 >>gi|149068744|gb|EDM18296.1| rCG40272, isoform CRA_c [R (492 aa) initn: 1707 init1: 1103 opt: 1187 Z-score: 1239.0 bits: 238.6 E(): 2.6e-60 Smith-Waterman score: 1863; 75.238% identity (77.857% similar) in 420 aa overlap (121-454:1-420) 100 110 120 130 140 150 mFLJ00 GTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQ ::::::.:::::.:::::::::: :::::: gi|149 MAYQVVRKSAALNTLQSQLEERQGRLEALQ 10 20 30 160 170 180 mFLJ00 ACVVQLQEARAQQSRQLEERQAENAAQRAA------------------------------ ::::::::::::::::::::::::.::: : gi|149 ACVVQLQEARAQQSRQLEERQAENSAQREAYETLREQAAHQEAALRRLQEEARDLLEQLV 40 50 60 70 80 90 190 200 210 220 mFLJ00 -----CAA-----------ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPA :: :::: :::::::::::::::::::::::::::::::::.:: gi|149 QRKARAAAERNLRNERRERANQARVSQELKKAAKRTVSISEIPNTLEDGTKEETVALGPA 100 110 120 130 140 150 230 240 250 260 270 280 mFLJ00 ALPEFSESETCEKWKRPFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLS : ::: ::..:::::::.::::::::::::. :::::::::::::::::::::::::::: gi|149 AKPEFLESDSCEKWKRPYSFKKRRGHSVGGVSEQRYQSIPVCVSAQIPSQAQDVLDAHLS 160 170 180 190 200 210 290 300 310 320 330 340 mFLJ00 EVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EVNAVCFAPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLA 220 230 240 250 260 270 350 360 mFLJ00 ATYNQAAQLWKVGETQSK------------------------GSR--------------- :::::::::::::::::: ::: gi|149 ATYNQAAQLWKVGETQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCS 280 290 300 310 320 330 370 380 390 400 410 420 mFLJ00 -TINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHL ::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::: gi|149 RTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLNLSHDQLHL 340 350 360 370 380 390 430 440 450 mFLJ00 LSCSRDNTLKVIDLRISNIRQVFRADGFKC :::::::::::::::::::::::::::::: gi|149 LSCSRDNTLKVIDLRISNIRQVFRADGFKCSSDWTKAVFSPDRSYALVGSSNGTLYIWDV 400 410 420 430 440 450 >>gi|149068743|gb|EDM18295.1| rCG40272, isoform CRA_b [R (362 aa) initn: 1136 init1: 1103 opt: 1172 Z-score: 1225.1 bits: 235.6 E(): 1.6e-59 Smith-Waterman score: 1367; 67.409% identity (74.652% similar) in 359 aa overlap (121-427:1-349) 100 110 120 130 140 150 mFLJ00 GTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQ ::::::.:::::.:::::::::: :::::: gi|149 MAYQVVRKSAALNTLQSQLEERQGRLEALQ 10 20 30 160 170 180 mFLJ00 ACVVQLQEARAQQSRQLEERQAENAAQRAA------------------------------ ::::::::::::::::::::::::.::: : gi|149 ACVVQLQEARAQQSRQLEERQAENSAQREAYETLREQAAHQEAALRRLQEEARDLLEQLV 40 50 60 70 80 90 190 200 210 220 mFLJ00 -----CAA-----------ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPA :: :::: :::::::::::::::::::::::::::::::::.:: gi|149 QRKARAAAERNLRNERRERANQARVSQELKKAAKRTVSISEIPNTLEDGTKEETVALGPA 100 110 120 130 140 150 230 240 250 260 270 280 mFLJ00 ALPEFSESETCEKWKRPFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLS : ::: ::..:::::::.::::::::::::. :::::::::::::::::::::::::::: gi|149 AKPEFLESDSCEKWKRPYSFKKRRGHSVGGVSEQRYQSIPVCVSAQIPSQAQDVLDAHLS 160 170 180 190 200 210 290 300 310 320 330 340 mFLJ00 EVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EVNAVCFAPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLA 220 230 240 250 260 270 350 360 370 380 390 mFLJ00 ATYNQAAQLWKVGETQSKGSRTINVLSYCNDVVCGD------HIIISGHNDQKIRFWDSR :::::::::::::::::: ..:: .: : . : ..: :. .. :: gi|149 ATYNQAAQLWKVGETQSK-----ETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLG 280 290 300 310 320 400 410 420 430 440 450 mFLJ00 GPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC .: .:... .: . . : :: : gi|149 RAYC----EAQSHLPQL-VVISALTLLCCGSCGIHIHSNSIL 330 340 350 360 >>gi|189027649|sp|Q6KAU8.2|A16L2_MOUSE RecName: Full=Aut (623 aa) initn: 2524 init1: 1129 opt: 1133 Z-score: 1181.5 bits: 228.3 E(): 4.2e-57 Smith-Waterman score: 2665; 80.036% identity (80.218% similar) in 551 aa overlap (11-454:1-551) 10 20 30 40 50 60 mFLJ00 LCAAARDSAAMAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKA :::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 MAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKA 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 ELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVKWQQEKKGLQLVCGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQVSSPASLRVKWQQEKKGLQLVCGE 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 MAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQLEERQAENAAQRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|189 MAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQLEERQAENAAQREA 120 130 140 150 160 170 190 mFLJ00 -----------------------------------CAA-----------ANQALVSQELK :: ::::::::::: gi|189 YETLLQQAVHQEAALRRLQEEARDLLEQLVQRKARAAAERNLRNERRERANQALVSQELK 180 190 200 210 220 230 200 210 220 230 240 mFLJ00 KAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKRPF------------ :::::::::::::::::::::::::::::::::::::::::::::::: gi|189 KAAKRTVSISEIPNTLEDGTKEETVALAPAALPEFSESETCEKWKRPFRSASATSLTLSR 240 250 260 270 280 290 250 260 270 280 290 mFLJ00 ---------SFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGP .:::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 CVDVVKGLLDFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGP 300 310 320 330 340 350 300 310 320 330 340 350 mFLJ00 NSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 NSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQL 360 370 380 390 400 410 360 370 mFLJ00 WKVGETQSK----G------------------------------------SRTINVLSYC ::::::::: : :::::::::: gi|189 WKVGETQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYC 420 430 440 450 460 470 380 390 400 410 420 430 mFLJ00 NDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 NDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTL 480 490 500 510 520 530 440 450 mFLJ00 KVIDLRISNIRQVFRADGFKC ::::::::::::::::::::: gi|189 KVIDLRISNIRQVFRADGFKCSSDWTKAVFSPDRSYALAGSSNGDLYIWDVNTGKLETSL 540 550 560 570 580 590 >>gi|149068742|gb|EDM18294.1| rCG40272, isoform CRA_a [R (351 aa) initn: 1320 init1: 959 opt: 1001 Z-score: 1047.3 bits: 202.7 E(): 1.2e-49 Smith-Waterman score: 1268; 64.345% identity (71.588% similar) in 359 aa overlap (121-427:1-338) 100 110 120 130 140 150 mFLJ00 GTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQ ::::::.:::::.:::::::::: :::::: gi|149 MAYQVVRKSAALNTLQSQLEERQGRLEALQ 10 20 30 160 170 180 mFLJ00 ACVVQLQEARAQQSRQLEERQAENAAQRAA------------------------------ ::::::::::::::::::::::::.::: : gi|149 ACVVQLQEARAQQSRQLEERQAENSAQREAYETLREQAAHQEAALRRLQEEARDLLEQLV 40 50 60 70 80 90 190 200 210 220 mFLJ00 -----CAA-----------ANQALVSQELKKAAKRTVSISEIPNTLEDGTKEETVALAPA :: :::: :::::::::::::::::::::::::::::::::.:: gi|149 QRKARAAAERNLRNERRERANQARVSQELKKAAKRTVSISEIPNTLEDGTKEETVALGPA 100 110 120 130 140 150 230 240 250 260 270 280 mFLJ00 ALPEFSESETCEKWKRPFSFKKRRGHSVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLS : ::: ::..:::::::.::::::::::::. :::::::::::::::::::::::::::: gi|149 AKPEFLESDSCEKWKRPYSFKKRRGHSVGGVSEQRYQSIPVCVSAQIPSQAQDVLDAHLS 160 170 180 190 200 210 290 300 310 320 330 340 mFLJ00 EVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLA :::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|149 EVNAVCFAPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPS------ 220 230 240 250 260 350 360 370 380 390 mFLJ00 ATYNQAAQLWKVGETQSKGSRTINVLSYCNDVVCGD------HIIISGHNDQKIRFWDSR ::::::::::::: ..:: .: : . : ..: :. .. :: gi|149 -----AAQLWKVGETQSK-----ETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLG 270 280 290 300 310 400 410 420 430 440 450 mFLJ00 GPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKC .: .:... .: . . : :: : gi|149 RAYC----EAQSHLPQL-VVISALTLLCCGSCGIHIHSNSIL 320 330 340 350 >>gi|148684547|gb|EDL16494.1| mCG6774, isoform CRA_a [Mu (410 aa) initn: 1409 init1: 790 opt: 851 Z-score: 890.4 bits: 173.8 E(): 6.9e-41 Smith-Waterman score: 1653; 81.138% identity (81.437% similar) in 334 aa overlap (182-454:5-338) 160 170 180 190 200 210 mFLJ00 CVVQLQEARAQQSRQLEERQAENAAQRAACAAANQALVSQELKKAAKRTVSISEIPNTLE : :::::::::::::::::::::::::::: gi|148 AFLSARANQALVSQELKKAAKRTVSISEIPNTLE 10 20 30 220 230 240 250 mFLJ00 DGTKEETVALAPAALPEFSESETCEKWKRPF---------------------SFKKRRGH ::::::::::::::::::::::::::::::: .::::::: gi|148 DGTKEETVALAPAALPEFSESETCEKWKRPFRSASATSLTLSRCVDVVKGLLDFKKRRGH 40 50 60 70 80 90 260 270 280 290 300 310 mFLJ00 SVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SVGGAPEQRYQSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLW 100 110 120 130 140 150 320 330 340 350 360 mFLJ00 NVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSK----G--- :::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|148 NVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKD 160 170 180 190 200 210 370 380 390 mFLJ00 ---------------------------------SRTINVLSYCNDVVCGDHIIISGHNDQ ::::::::::::::::::::::::::: gi|148 KVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHIIISGHNDQ 220 230 240 250 260 270 400 410 420 430 440 450 mFLJ00 KIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KIRFWDSRGPHCIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRAD 280 290 300 310 320 330 mFLJ00 GFKC :::: gi|148 GFKCSSDWTKAVFSPDRSYALAGSSNGDLYIWDVNTGKLETSLQGPHCTAVNAVAWCFSG 340 350 360 370 380 390 454 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 12:27:49 2009 done: Thu Mar 12 12:34:40 2009 Total Scan time: 925.110 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]