FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1457.ptfa, 1364 aa vs ./tmplib.26680 library 1767653 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.4465+/-0.00522; mu= 12.2188+/- 0.348 mean_var=146.3995+/-33.653, 0's: 0 Z-trim: 1 B-trim: 0 in 0/36 Lambda= 0.1060 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1705 ( 562 res) mbh00641 ( 562) 238 49 3.7e-06 >>mKIAA1705 ( 562 res) mbh00641 (562 aa) initn: 209 init1: 132 opt: 238 Z-score: 202.9 bits: 48.7 E(): 3.7e-06 Smith-Waterman score: 238; 26.538% identity (28.395% ungapped) in 260 aa overlap (732-983:303-553) 710 720 730 740 750 mKIAA1 HASVLRNEPSSRRSSSSTMLDGAGALGKFDFEIADLFLFGCPLGLVLALRKTVIP----S :.. ..: .: ::.. :::: . : : mKIAA1 LYITKRRLREIEDRLHGLKAPSISQTPALKFKVENFFCMGSPLAVFLALRG-IRPGNSGS 280 290 300 310 320 330 760 770 780 790 800 810 mKIAA1 LDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHSLPPFSIPRYQR---YPLGDGCST : . : :... :.:::.:: : :::::. ... .. : .: :. : . mKIAA1 QDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPN 340 350 360 370 380 390 820 830 840 850 860 870 mKIAA1 LLADVLQTHNTVFQEH-AAPSSPGTAPAGRGFRRASEISIASQVSGMAESYTASSIAQKG .: . . .. .:. :: :: :.:. :: ::.. : : :.::. :: mKIAA1 FLNPAKEPTSVSDSENIAAIPSPVTSPVLS--RRHYGESITNI--GKASILGAASIG-KG 400 410 420 430 440 880 890 900 910 920 930 mKIAA1 PSSLNHTPSIRRLSLLALPPPSPTTQGPRARARQVSPNLERAPCLPDLDIGEVAAKWWGQ ... . : . : . . . . . . : . . :: : . . . mKIAA1 LGGMLFSRFGRSSASQPSEPSKDSLEDDKKPSASPSTTTVATQTLPHSGSGFLDSALELE 450 460 470 480 490 500 940 950 960 970 980 990 mKIAA1 KRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQVMRHDSSSILELDGKEVS .:::. : . . . ... : ..:: : ::. ::: ...:. .. mKIAA1 HRIDFELREGLVESRYWSAVTSH---TAYWSSLDVALFLLTFMYKHEHDTEAKPSLGSL 510 520 530 540 550 560 1000 1010 1020 1030 1040 1050 mKIAA1 VFTPSQPRERWQRKRTHVKLRNVAANHRINDAVANEDGPQVVTGRFMYGPLDMVTLTGEK 1364 residues in 1 query sequences 1767653 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:45:35 2006 done: Mon Mar 27 10:45:36 2006 Scan time: 1.210 Display time: 0.030 Function used was FASTA [version 3.4t11 Apr 17, 2002]