FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1568.ptfa, 792 aa vs ./tmplib.26680 library 1768225 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.9278+/-0.00766; mu= -5.9755+/- 0.507 mean_var=325.2263+/-78.933, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.0711 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00236 ( 701 res) mph02250 ( 701) 404 55 2.7e-08 >>mFLJ00236 ( 701 res) mph02250 (701 aa) initn: 377 init1: 149 opt: 404 Z-score: 241.3 bits: 55.3 E(): 2.7e-08 Smith-Waterman score: 492; 25.320% identity (29.766% ungapped) in 703 aa overlap (21-643:3-680) 10 20 30 40 50 60 mKIAA1 TSGLQASTVWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE .:: : .:. : ::.:::: .. .: ::. .: :. mFLJ00 GLQSAKLGGLHWGQDYEFKVRPSSGRARGPDSNVLLLRLPEQ 10 20 30 40 70 80 90 100 110 120 mKIAA1 APSAPPQSVTVLTVGSHNSTSISVSWDPPPADHQNGIIQEYKIWCLGNETRFHINKTVDA .::::::.::. . .. :. ::: ::::. .::.:. :..: ::: . : :: . mFLJ00 VPSAPPQGVTLRS----GNGSVFVSWAPPPAESHNGVIRGYQVWSLGNASLPAANWTVVG 50 60 70 80 90 130 140 150 160 170 mKIAA1 AIRSVVIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSI---TEQ .. :. .:: .: :.::: :.::.: : : ... : . . . :: mFLJ00 EQTQLEIATRLPG-SYCVQVAAVTGAGAGELSTPVCLLLEQAMEQSARDPRKHVPWTLEQ 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 ITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRP . ....: ::. . :..:.:... .: ::: :. . :. : mFLJ00 LRATLRRPEVIASSAVLLWLLLLGITVCIYRRRKAGVHLGPGLYRYTSEDAILKHR---- 160 170 180 190 200 210 240 250 260 270 280 mKIAA1 GLLNAGDPNYPWLADSWPAT--SLPVNNSNSGPNEIGN------FGRGDVL------PPV .. .: :::::.: .: : ...:.: ...: :: ... : : mFLJ00 --MDHSDS--PWLADTWRSTSGSRDLSSSSSLSSRLGLDPRDPLEGRRSLISWDPRSPGV 220 230 240 250 260 290 300 310 320 330 mKIAA1 PGQGDKTA---TMLSDGAIYSSIDFTTKTTYNS---SSQITQATPYATTQILHSN-SIHE : : .. ..... . . :: :. ..:.:... : : .. mFLJ00 PLLPDTSTFYGSLIAEQPSSPPVRPSPKTPAARRFPSKLAGTSSPWASSDSLCSRRGLCS 270 280 290 300 310 320 340 350 360 370 380 mKIAA1 LAVDL-PDPQWKSSVQQKTD-------LMG------FGYSLPDQNKGNNGGKGGKKKKTK ..: : ::.. .:. : : ... : .. . : . . :. .. mFLJ00 PRMSLTPTEAWKAKKKQELHQANSSPLLRGSHPMEIWAWELGSRASKNLSQSPGEAPRAV 330 340 350 360 370 380 390 400 410 mKIAA1 NSSKA----QKNNGSTWANVPLPPPPVQ-----------------------PLPGTELGH : .: . :.: :. :::: :.. :::.. :. mFLJ00 VSWRAVGPQLHRNSSELASRPLPPTPLSLRGASSHDPQSQCVEKLQAPSSDPLPAAPLSV 390 400 410 420 430 440 420 430 440 450 460 470 mKIAA1 YAAEQENGYDSDSWCPPLPVQTYLHQGMEDELEE--DEDRVPTPPVRGVASSPAISFGQQ . . .. ... : : .. : .. . ::: :.: : :: . :: .: :.. mFLJ00 LNSSRPSSPQASFLSCPSPSSSNLSSSSLSSLEEEEDQDSVLTP--EEVALCLELSDGEE 450 460 470 480 490 500 480 490 500 510 520 mKIAA1 S-TATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNTP----PPQP---PAPP . : ...: :: : .... : . :... . :.. ::.: :.: mFLJ00 TPTNSVSPMPRAPSPPTTYGYISIPTCSGLADMGRAGGGVGSEVGNLLYPPRPCPTPTPS 510 520 530 540 550 560 530 540 550 560 570 580 mKIAA1 LGYVSGALISDLETDVPDEDAD----DEEEPLEIPRPLRALDQTPGSSMDNLDSSVTGKA : .... : : .::. :. .. : . ::: . : .:: . . mFLJ00 EGSLANGWGSASEDNVPSARASLVSSSDGSFLADTHFARALAVAVDSFGLSLDPREADCV 570 580 590 600 610 620 590 600 610 620 630 640 mKIAA1 FSSSQRQRPTSPFSTDSNTSAAQNQSQRPRPTKKHKGGRMDPQPVLPHRREGMPDDLPP- :... .:: : .. : ... : : . . .. . .: : ::: mFLJ00 FTDA-----SSPPSPRGDLSLTRSFSL---PLWEWRPDWLEDAEISHTQRLGR--GLPPW 630 640 650 660 670 650 660 670 680 690 700 mKIAA1 PPDPPPGQGLRQQIGLSQHSGNVENSTERKGSSLERQQAANLEDTKSSLDCPAKTVLEWQ ::: mFLJ00 PPDSRASSQRSWLTGAVPKAGDSS 680 690 700 792 residues in 1 query sequences 1768225 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:48:29 2006 done: Mon Mar 27 10:48:30 2006 Scan time: 0.930 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]