FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1486.ptfa, 492 aa vs ./tmplib.26680 library 1768525 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 11.5592+/-0.00829; mu= -16.3032+/- 0.548 mean_var=407.2886+/-98.616, 0's: 0 Z-trim: 2 B-trim: 0 in 0/36 Lambda= 0.0636 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0865 ( 1183 res) mbp09319 (1183) 512 61 5.8e-10 >>mKIAA0865 ( 1183 res) mbp09319 (1183 aa) initn: 482 init1: 362 opt: 512 Z-score: 271.2 bits: 60.9 E(): 5.8e-10 Smith-Waterman score: 624; 31.884% identity (39.374% ungapped) in 552 aa overlap (10-492:668-1183) 10 20 30 mKIAA1 DSSLSQVCSPAADPEEE-EPVYIEMVGNILRDFRKEED- : .: ... :::::::::: : .: : mKIAA0 HQAPGTLSVQWARPDSVPQCTPQLPLHLPLPQGDYDDDAEPVYIEMVGNAARAGGSETDS 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 -DQSEAVYEEMKYPIFDDLGHDSKCDFDHHS---CSSQCATPTVPDLDFVKSSGPCTPKG ::.:.::::::: :. . : : . . : : . . . : : :. mKIAA0 PDQGESVYEEMKY-ILPEEG----CGLGMLTFLPASPPLFLETRKAIILEAAEGNCQPSK 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 LLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLE-NVSYMKQPP ::::::::::: ::::::::::.:: :: ::::::::::: :::::: :..: : mKIAA0 DTCDIPPPFPNLLPHRPPLLVFPPTPVTRSPASDESPLTPLEVKKLPVLETNLKYPVQSE 760 770 780 790 800 810 160 170 180 mKIAA1 GACPSSLPSHGSSHA--KDQTGALG-----------------PAPGASILSSSPPP---- :. : : :...... .:: .. : : :: .::: mKIAA0 GSSPLS-PQYSKAQKGDNDQLASPGFPVFNGPSRISPPATPPPPPGPPPAPCGPPPAPCG 820 830 840 850 860 870 190 200 210 220 230 mKIAA1 --PSTLYRTQSPHGYPKSH-STSPSP---VSMGRSLTPLSLKRP-----PPYDAVHSGSL :. .: : : . . :.: .: . ...: . : :: ... ... mKIAA0 PPPAPCGPPPAPCGPPPAPCGPPPAPCGAASASCGVAPAPCRPPTHFAFPPESVLVTAAK 880 890 900 910 920 930 240 250 260 270 mKIAA1 SRSSSSVPHTTPRPVSQD--G--AKMVNAAVNTYSAAQSGSR----------------SR . ..:..:.: :.: : : ...:.: . ..:.. : :: mKIAA0 ALTNSDLPRTQPKPSSAPVPGPCSSFVKAPYSPGKTARADLRKTSSTFSPPSPYSPPNSR 940 950 960 970 980 990 280 290 300 310 320 330 mKIAA1 TPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAE--KSTEELKVRSH--STEPLPKLDSK .:::.::.:::.::::.::.:. ::: .: :: ... .:. :.. :.: . ... mKIAA0 PLSSPLDELASLFNSGRSVLRRSAVGRRIRE-AEGFETNMNLSSRDEPSSSEMASETQDR 1000 1010 1020 1030 1040 1050 340 350 360 370 380 390 mKIAA1 ERGHYG---SSSSREPVKAQEWDGTPGPPVVTSRMGRCSVSPTLLAGNHSSEPKVSCKLG . ...: ::: : :.. : ::... . : :.: .: : . . mKIAA0 NANNHGTQLSSSLSSDVTAEN-----GNPVTNGLAEDDGCSRLCLSGMGTS----SFQRN 1060 1070 1080 1090 1100 400 410 420 430 440 450 mKIAA1 RSASTSGVPPPSVTPLRQASDLQQSQVACMQWFHGDHTMLEMIEKKRCLCKEIKARQKTE : . :. : . :: :.... . .: :... .: ::. ::. . mKIAA0 RESHTTQV----IHQLR----LSENESVALQ---------ELLDWRRKLCE---AREGWQ 1110 1120 1130 1140 460 470 480 490 mKIAA1 KGLCKQDS-MPILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI ..: . . : : :: . :: .. . .::... mKIAA0 EALQHPEPRAPPPPPCKKPTLLKKPEGGSCTRLPSQLWDSSM 1150 1160 1170 1180 492 residues in 1 query sequences 1768525 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:46:22 2006 done: Mon Mar 27 10:46:23 2006 Scan time: 0.730 Display time: 0.030 Function used was FASTA [version 3.4t11 Apr 17, 2002]