# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg14487.fasta.nr -Q ../query/mKIAA1890.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1890, 875 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916477 sequences Expectation_n fit: rho(ln(x))= 5.0466+/-0.000184; mu= 13.9384+/- 0.010 mean_var=73.3018+/-14.109, 0's: 37 Z-trim: 69 B-trim: 49 in 2/66 Lambda= 0.149802 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|62088584|dbj|BAD92739.1| CUB and Sushi multiple (2966) 5823 1268.9 0 gi|148690260|gb|EDL22207.1| CUB and Sushi multiple (2996) 4964 1083.2 0 gi|124248566|ref|NP_444401.2| CUB and Sushi multip (3564) 4772 1041.8 0 gi|71383960|gb|AAZ31060.1| multiple domain complem (3564) 4718 1030.1 0 gi|189538567|ref|XP_001921047.1| PREDICTED: simila (1849) 4684 1022.5 0 gi|38604959|sp|Q923L3.1|CSMD1_MOUSE RecName: Full= (3564) 4677 1021.3 0 gi|109085512|ref|XP_001097133.1| PREDICTED: simila (3565) 4488 980.4 0 gi|119600869|gb|EAW80463.1| CUB and Sushi multiple (3564) 4458 973.9 0 gi|157502199|ref|NP_150094.4| CUB and Sushi multip (3565) 4458 973.9 0 gi|38604975|sp|Q96PZ7.2|CSMD1_HUMAN RecName: Full= (3565) 4452 972.6 0 gi|27924019|gb|AAK73475.2|AF333704_1 CUB and sushi (3566) 4452 972.6 0 gi|194226569|ref|XP_001916757.1| PREDICTED: CUB an (3578) 4448 971.8 0 gi|194679144|ref|XP_605201.4| PREDICTED: similar t (3468) 4325 945.2 0 gi|126303970|ref|XP_001381554.1| PREDICTED: simila (3565) 4279 935.2 0 gi|224048645|ref|XP_002194077.1| PREDICTED: CUB an (3606) 4265 932.2 0 gi|118088968|ref|XP_419917.2| PREDICTED: similar t (3555) 4249 928.8 0 gi|109482172|ref|XP_001063107.1| PREDICTED: simila (3589) 3442 754.4 2.1e-214 gi|47218722|emb|CAG05694.1| unnamed protein produc (3239) 3377 740.3 3.2e-210 gi|118101683|ref|XP_417788.2| PREDICTED: similar t (3562) 3360 736.6 4.4e-209 gi|126330338|ref|XP_001380425.1| PREDICTED: simila (3575) 3358 736.2 6e-209 gi|224082107|ref|XP_002195962.1| PREDICTED: simila (3272) 3328 729.7 5e-207 gi|194665931|ref|XP_001790373.1| PREDICTED: simila (3640) 3287 720.9 2.5e-204 gi|62954774|dbj|BAD97692.1| CSMD2 protein [Homo sa (3631) 3284 720.2 3.9e-204 gi|119627852|gb|EAX07447.1| CUB and Sushi multiple (3671) 3284 720.2 4e-204 gi|149023995|gb|EDL80492.1| rCG30855 [Rattus norve (1441) 3277 718.4 5.6e-204 gi|114555446|ref|XP_513297.2| PREDICTED: CUB and S (3622) 3274 718.0 1.8e-203 gi|148698293|gb|EDL30240.1| mCG115553 [Mus musculu (3198) 3272 717.6 2.2e-203 gi|148725309|emb|CAK04106.2| novel protein similar (3455) 3245 711.8 1.3e-201 gi|189532659|ref|XP_693833.3| PREDICTED: CUB and S (3589) 3245 711.8 1.3e-201 gi|47229455|emb|CAF99443.1| unnamed protein produc (3239) 3161 693.6 3.6e-196 gi|73974345|ref|XP_850060.1| PREDICTED: similar to (3707) 3104 681.3 2.1e-192 gi|194215054|ref|XP_001915995.1| PREDICTED: CUB an (3707) 3103 681.1 2.4e-192 gi|109482170|ref|XP_001063165.1| PREDICTED: simila (3538) 3092 678.7 1.2e-191 gi|109482168|ref|XP_001063221.1| PREDICTED: simila (3703) 3092 678.7 1.2e-191 gi|119612353|gb|EAW91947.1| CUB and Sushi multiple (3463) 3090 678.3 1.6e-191 gi|30908445|gb|AAO34702.1| CUB and sushi multiple (3501) 3090 678.3 1.6e-191 gi|119612352|gb|EAW91946.1| CUB and Sushi multiple (3538) 3090 678.3 1.6e-191 gi|205277354|ref|NP_443132.3| CUB and Sushi multip (3538) 3090 678.3 1.6e-191 gi|119612351|gb|EAW91945.1| CUB and Sushi multiple (3539) 3090 678.3 1.6e-191 gi|38045890|ref|NP_937757.1| CUB and Sushi multipl (3667) 3090 678.3 1.7e-191 gi|34330133|dbj|BAC82444.1| CSMD3 protein isoform (3667) 3090 678.3 1.7e-191 gi|38604740|sp|Q7Z407.2|CSMD3_HUMAN RecName: Full= (3670) 3090 678.3 1.7e-191 gi|34330131|dbj|BAC82443.1| CSMD3 protein isoform (3707) 3090 678.3 1.7e-191 gi|38045888|ref|NP_937756.1| CUB and Sushi multipl (3707) 3090 678.3 1.7e-191 gi|109482174|ref|XP_001063057.1| PREDICTED: simila (3593) 3086 677.4 3e-191 gi|158518621|sp|Q80T79.2|CSMD3_MOUSE RecName: Full (3670) 3082 676.6 5.5e-191 gi|161086986|ref|NP_001074860.2| CUB and Sushi mul (3707) 3082 676.6 5.5e-191 gi|118087295|ref|XP_418391.2| PREDICTED: similar t (3707) 3067 673.3 5.2e-190 gi|148725804|emb|CAK04637.2| novel protein similar (1931) 3039 667.0 2.1e-188 gi|189530377|ref|XP_001921686.1| PREDICTED: si:ch2 (2554) 2956 649.2 6.6e-183 >>gi|62088584|dbj|BAD92739.1| CUB and Sushi multiple dom (2966 aa) initn: 5823 init1: 5823 opt: 5823 Z-score: 6787.9 bits: 1268.9 E(): 0 Smith-Waterman score: 5823; 91.743% identity (97.018% similar) in 872 aa overlap (4-875:2095-2966) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|620 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2070 2080 2090 2100 2110 2120 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::::::::::::::::::::::::::::::.:::.::::::.:::::.:: gi|620 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTG 2130 2140 2150 2160 2170 2180 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : :::.:::::::::::::::: :::::::::: ::::.:::::::::::::: :..::: gi|620 YLLQGVSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSILYHC 2190 2200 2210 2220 2230 2240 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : ::::::::::::::.:::::::::::::::::::::::::::::::::::.:.:::.: gi|620 KKGFYLLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGAVVHYSCRG 2250 2260 2270 2280 2290 2300 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE .. : ::.::::::::::::.::::.::.::::::::::::::::::.:::::::::::: gi|620 SESLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDDFKTKSLLRFSCE 2310 2320 2330 2340 2350 2360 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::: :::::.::::::.::::::::::::::::::::.::::::::::::::::: gi|620 MGHQLRGSPERTCLLNGSWSGLQPVCEAVSCGNPGTPTNGMIVSSDGILFSSSVIYACWE 2370 2380 2390 2400 2410 2420 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|620 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLANGIQFGTDFTFNKTVSYQCNPGY 2430 2440 2450 2460 2470 2480 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY .:: :: :::::::: :: :.:.:::::: ::::: :: :::::::::.::::::.::: gi|620 VMEAVTSATIRCTKDGRWNPSKPVCKAVLCPQPPPVQNGTVEGSDFRWGSSISYSCMDGY 2490 2500 2510 2520 2530 2540 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::.:::::::::::: ::::::::::::.:::::.::: ::.: gi|620 QLSHSAILSCEGRGVWKGEIPQCLPVFCGDPGIPAEGRLSGKSFTYKSEVFFQCKSPFIL 2550 2560 2570 2580 2590 2600 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY ::::::.::::: :::::::::::::..:::::::::::::::.:::::::::::::::: gi|620 VGSSRRVCQADGTWSGIQPTCIDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVFFRCRKGY 2610 2620 2630 2640 2650 2660 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|620 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPTFGYTLVYTCHPGFF 2670 2680 2690 2700 2710 2720 640 650 660 670 680 690 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCKIPSDVFFINSVWKGYYEYLGKRQPATLTVDWFNATS :::::::::::::::::::::::::::::::.::.::::::::::::::::::::::::: gi|620 LAGGSEHRTCKADMKWTGKSPVCKIPSDVFFVNSLWKGYYEYLGKRQPATLTVDWFNATS 2730 2740 2750 2760 2770 2780 700 710 720 730 740 750 mKIAA1 SKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSKFENDNWGLDGYVSSG :::::::. :: :.:.:::.:::::::::::::.::: :::::::::::::::::::::: gi|620 SKVNATFSEASPVELKLTGIYKKEEAHLLLKAFQIKGQADIFVSKFENDNWGLDGYVSSG 2790 2800 2810 2820 2830 2840 760 770 780 790 800 810 mKIAA1 LERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGSVAAAILVPFFALILS ::::::.:::::::::::::::::::: : : :::.::.::::::::::::::::::::: gi|620 LERGGFTFQGDIHGKDFGKFKLERQDPLNPDQDSSSHYHGTSSGSVAAAILVPFFALILS 2850 2860 2870 2880 2890 2900 820 830 840 850 860 870 mKIAA1 GFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTEAKAVRFDTTLNTVCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTEAKAVRFDTTLNTVCT 2910 2920 2930 2940 2950 2960 mKIAA1 VV :: gi|620 VV >>gi|148690260|gb|EDL22207.1| CUB and Sushi multiple dom (2996 aa) initn: 5821 init1: 4956 opt: 4964 Z-score: 5784.5 bits: 1083.2 E(): 0 Smith-Waterman score: 5901; 94.613% identity (94.725% similar) in 891 aa overlap (4-875:2134-2996) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|148 PGYFLQGQRLLQCQANGTWSTEEDRPRCKAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2110 2120 2130 2140 2150 2160 40 50 60 70 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCV-----------------P--ITCGHPGNPAHGL ::::::::::::::::::::::::::: : ::::::::::::: gi|148 PGFRLVGTSVRICLQDHKWSGQTPVCVRGSGGALFNVGSDVDLVPTAITCGHPGNPAHGL 2170 2180 2190 2200 2210 2220 80 90 100 110 120 130 mKIAA1 TNGTEFNLNDLVNFTCHTGYRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TNGTEFNLNDLVNFTCHTGYRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRH 2230 2240 2250 2260 2270 2280 140 150 160 170 180 190 mKIAA1 GQQNFPESFEYGTSVMYHCKTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQQNFPESFEYGTSVMYHCKTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANA 2290 2300 2310 2320 2330 2340 200 210 220 230 240 250 mKIAA1 VLTGELFTYGATVQYSCKGGQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VLTGELFTYGATVQYSCKGGQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAH 2350 2360 2370 2380 2390 2400 260 270 280 290 300 310 mKIAA1 GSRLGDEFKTKSLLRFSCEMGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GSRLGDEFKTKSLLRFSCEMGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGM 2410 2420 2430 2440 2450 2460 320 330 340 350 360 370 mKIAA1 ILSSDGILFSSSVIYACWEGYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ILSSDGILFSSSVIYACWEGYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQ 2470 2480 2490 2500 2510 2520 380 390 400 410 420 430 mKIAA1 FGTDFTFNKTVSYQCNPGYLMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FGTDFTFNKTVSYQCNPGYLMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKV 2530 2540 2550 2560 2570 2580 440 450 460 470 480 490 mKIAA1 EGSDFRWGASISYSCVDGYQLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EGSDFRWGASISYSCVDGYQLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSG 2590 2600 2610 2620 2630 2640 500 510 520 530 540 550 mKIAA1 KSFTFKSEVFIQCKPPFVLVGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KSFTFKSEVFIQCKPPFVLVGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQN 2650 2660 2670 2680 2690 2700 560 570 580 590 600 610 mKIAA1 SSKGYEVGSTVFFRCRKGYHIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSKGYEVGSTVFFRCRKGYHIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRA 2710 2720 2730 2740 2750 2760 620 630 640 650 660 670 mKIAA1 IDLPAFGYTLVYTCHPGFFLAGGSEHRTCKADMKWTGKSPVCKIPSDVFFINSVWKGYYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IDLPAFGYTLVYTCHPGFFLAGGSEHRTCKADMKWTGKSPVCKIPSDVFFINSVWKGYYE 2770 2780 2790 2800 2810 2820 680 690 700 710 720 730 mKIAA1 YLGKRQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YLGKRQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADI 2830 2840 2850 2860 2870 2880 740 750 760 770 780 790 mKIAA1 FVSKFENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGT :::::::::::::::: .::::::::::::::: gi|148 FVSKFENDNWGLDGYV----------------------------NPSNSDADSSNHYQGT 2890 2900 2910 800 810 820 830 840 850 mKIAA1 SSGSVAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSGSVAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNL 2920 2930 2940 2950 2960 2970 860 870 mKIAA1 KPTEAKAVRFDTTLNTVCTVV ::::::::::::::::::::: gi|148 KPTEAKAVRFDTTLNTVCTVV 2980 2990 >>gi|124248566|ref|NP_444401.2| CUB and Sushi multiple d (3564 aa) initn: 6204 init1: 4772 opt: 4772 Z-score: 5559.2 bits: 1041.8 E(): 0 Smith-Waterman score: 6178; 98.083% identity (98.309% similar) in 887 aa overlap (4-875:2678-3564) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|124 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .:::::::::::::::::::: gi|124 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFINSVWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|124 RQPATLTVDWFNATSSKVNATFTAASRVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|124 AKAVRFDTTLNTVCTVV 3550 3560 >>gi|71383960|gb|AAZ31060.1| multiple domain complement (3564 aa) initn: 6156 init1: 4718 opt: 4718 Z-score: 5496.1 bits: 1030.1 E(): 0 Smith-Waterman score: 6130; 97.182% identity (97.858% similar) in 887 aa overlap (4-875:2678-3564) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|713 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|713 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGSEFNLNDLVNFTCHTG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|713 YLLQGASRAQCRSNGQWSSPLPICRVVNCSDPGFVENAVRHGQQNFPESFEYGTSVMYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|713 KKGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTFGATVQYSCKG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY ::::::::::::::::::::.:::::::::.::: ::::::::::::::::::::::::: gi|713 LMEPPTSPTIRCTKDGTWNQTRPLCKAVLCSQPPSVPNGKVEGSDFRWGASISYSCVDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|713 VGSSRRTCQADGMWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .:::::::::::::::::::: gi|713 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFINSVWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|713 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|713 AKAVRFDTTLNTVCTVV 3550 3560 >>gi|189538567|ref|XP_001921047.1| PREDICTED: similar to (1849 aa) initn: 4684 init1: 4684 opt: 4684 Z-score: 5460.3 bits: 1022.5 E(): 0 Smith-Waterman score: 4684; 71.330% identity (88.532% similar) in 872 aa overlap (4-875:978-1849) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN ::: :::::::::::::: ::::::::::: gi|189 CNTGYTLVGSHVRECQANGLWSGVETKCLAGHCDSPDPIVNGHISGDGSSYRDTVVYQCN 950 960 970 980 990 1000 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::.::::::: :::.::::.:::::::::::::::.: :::.::::::.:::::.:: gi|189 LGFRLIGTSVRICQQDHRWSGQAPVCVPITCGHPGNPANGRTNGSEFNLNDVVNFTCNTG 1010 1020 1030 1040 1050 1060 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : :.:::::::: :::::::::.:.:::::::: ::::.::.:: .::::.: ..:.::: gi|189 YLLHGASRAQCRMNGQWSSPLPVCKVVNCSDPGFVENAIRHSQQRYPESFNYRNTVIYHC 1070 1080 1090 1100 1110 1120 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : ::::::::.::: ..:.:::::::::.:::: ::.: : .... ::: :.:.:::. gi|189 KRGFYLLGSSVLTCRSNGFWDRSLPKCLSISCGDPGTPPFAQMSSQKFTYRAVVHYSCSQ 1130 1140 1150 1160 1170 1180 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE :. : ::.:: : ::..:::: :.:::..::::::::.:.::::::.::. :::::: :: gi|189 GRTLLGNGTRQCLEDGRWSGSPPYCSGDNPGFCGDPGVPSHGSRLGEEFRHKSLLRFMCE 1190 1200 1210 1220 1230 1240 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :. : ::.::::: ::::::.:::::::::::::::. . :. :::.:::.:: ::::: gi|189 AGYTLIGSSERTCLQNGSWSGTQPVCEAVSCGNPGTPAYAKIVFSDGMLFSNSVTYACWE 1250 1260 1270 1280 1290 1300 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY ::::::: :::::.::::::.:::: :::::::: . ::: .: .: ::::: :.::::: gi|189 GYKTSGLTTRHCTTNGTWTGSAPDCIIISCGDPGPIANGIYIGKEFIFNKTVHYRCNPGY 1310 1320 1330 1340 1350 1360 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY :.: : ..::.:::::::..: ::...:.::: . :.::::: .::.:..::: .:: gi|189 EMDPLDSSVLRCSKDGTWNQTKPSCKVIMCGQPPAIHYGRVEGSDQQWGSSVTYSCFEGY 1370 1380 1390 1400 1410 1420 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL ::: .: .::: :.:.::.::::::.:::::::::: . :..::.:::: ..:.::..: gi|189 QLSSPGIATCEGNGTWRGEIPQCLPVLCGDPGTPAEGYMEGRQFTYKSEVTFHCRPPYLL 1430 1440 1450 1460 1470 1480 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY :::::: :.::. :::.::.::: ...:: ::::: .:: ...:..::: .::::::.: gi|189 VGSSRRLCEADASWSGFQPSCIDSTNSACKDPGTPAYGIPVQAQGFDVGSKIFFRCRKNY 1490 1500 1510 1520 1530 1540 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :: :::::::: ::::::.: ::. :::::::::.:.::.:::::..::::.:::. ::. gi|189 HILGSTTRTCLENLTWSGMQPECVAHACRQPETPSHVDVKAIDLPTLGYTLMYTCQDGFY 1550 1560 1570 1580 1590 1600 640 650 660 670 680 690 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCKIPSDVFFINSVWKGYYEYLGKRQPATLTVDWFNATS ::::::::::::: .:::: ::::.:.::: .:: : :.:::::::: ::.::. ::::. gi|189 LAGGSEHRTCKADGRWTGKPPVCKVPADVFSLNSGWAGFYEYLGKRQAATVTVNAFNATT 1610 1620 1630 1640 1650 1660 700 710 720 730 740 750 mKIAA1 SKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSKFENDNWGLDGYVSSG :.::.:. : :...:.:.::::: :::::...:.::.. . :::.::::..::::.: gi|189 SRVNVTLLEQSGVHIKLSGTYKKEENHLLLKVYQIRGPTEQYFSKFKNDNWAMDGYVTSE 1670 1680 1690 1700 1710 1720 760 770 780 790 800 810 mKIAA1 LERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGSVAAAILVPFFALILS :. : .:: ::.::::::.: :: ..: : .: : ::.:.:::::::::::::::: gi|189 SEKKMFVYQGHIHSKDFGKFQLTRQGLITTDMDPANPYYGTNSSSVAAAILVPFFALILS 1730 1740 1750 1760 1770 1780 820 830 840 850 860 870 mKIAA1 GFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTEAKAVRFDTTLNTVCT :::::::::::::::::::::::::.::::::::::::::.::::::::::::::::::: gi|189 GFAFYLYKHRTRPKVQYNGYAGHENTNGQASFENPMYDTNMKPTEAKAVRFDTTLNTVCT 1790 1800 1810 1820 1830 1840 mKIAA1 VV :: gi|189 VV >>gi|38604959|sp|Q923L3.1|CSMD1_MOUSE RecName: Full=CUB (3564 aa) initn: 6109 init1: 4677 opt: 4677 Z-score: 5448.2 bits: 1021.3 E(): 0 Smith-Waterman score: 6083; 96.843% identity (97.407% similar) in 887 aa overlap (4-875:2678-3564) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|386 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::: . . :. :::::::::::::::::::::::::::::::::::: gi|386 PGFRLVGTSVRICCRTTSGRGRLTVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 MGHQLRGFAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .:::::::::::::::::::: gi|386 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFINSVWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|386 RQPATLTVDWFNATSSKVNATFTAASRVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|386 AKAVRFDTTLNTVCTVV 3550 3560 >>gi|109085512|ref|XP_001097133.1| PREDICTED: similar to (3565 aa) initn: 5868 init1: 4488 opt: 4488 Z-score: 5227.5 bits: 980.4 E(): 0 Smith-Waterman score: 5842; 91.206% identity (95.829% similar) in 887 aa overlap (4-875:2679-3565) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|109 CNTGYTLVGSHVRECLANGLWSGTETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::::::::::::::::::::::::::::::.:::.::::::.:::::. : gi|109 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNMG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : :::::::::::::::::::: :::::::::: ::::.:::::::::::::: ::.::: gi|109 YLLQGASRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSVLYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : ::::::::::::::.::::::::::::::::::::::::.::::::::::::.:::.: gi|109 KKGFYLLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAILTGELFTYGATVHYSCRG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE .: : ::.::::::::::::.::::.::.::::::::::::::::::::::::::::::: gi|109 SQSLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::: :::::.::::::.::::::::::::::::::::.::::::::::::::::: gi|109 MGHQLRGSPERTCLLNGSWSGLQPVCEAVSCGNPGTPTNGMIVSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::: ::::::::::::.:::::::::: gi|109 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLANGIQFGTDFTFNQTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY :::: :: :::::::::::::.:.:::::: ::::: :: :::.::.::.:::::::::: gi|109 LMEPVTSATIRCTKDGTWNQSKPVCKAVLCPQPPPVQNGTVEGTDFHWGSSISYSCVDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::::::::::::::: ::::::::::::.:::::.::: ::.: gi|109 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGIPAEGRLSGKSFTYKSEVFFQCKSPFIL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY :::::: :::::.::::::.::::::..:::::::::::::::.:::::::::::::::: gi|109 VGSSRRICQADGMWSGIQPACIDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPTFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .::::::.::::::::::::: gi|109 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFVNSVWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK ::::::::::::::::::::::. ::::.:.:::::::::::::::::.::::::::::: gi|109 RQPATLTVDWFNATSSKVNATFSEASQVELKLTGVYKKEEAHLLLKAFQIKGPADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::.:::::::::::::::::::: : : ::::::.:::::: gi|109 FENDNWGLDGYVSSGLERGGFTFQGDIHGKDFGKFKLERQDPLNPDQDSSNHYHGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|109 AKAVRFDTTLNTVCTVV 3550 3560 >>gi|119600869|gb|EAW80463.1| CUB and Sushi multiple dom (3564 aa) initn: 5808 init1: 4458 opt: 4458 Z-score: 5192.5 bits: 973.9 E(): 0 Smith-Waterman score: 5782; 90.079% identity (95.378% similar) in 887 aa overlap (4-875:2678-3564) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|119 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::::::::::::::::::::::::::::::.:::.::::::.:::::.:: gi|119 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : :::.:::::::::::::::: :::::::::: ::::.:::::::::::::: :..::: gi|119 YLLQGVSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSILYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : ::::::::::::::.:::::::::::::::::::::::::::::::::::.:.:::.: gi|119 KKGFYLLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGAVVHYSCRG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE .. : ::.::::::::::::.::::.::.::::::::::::::::::.:::::::::::: gi|119 SESLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDDFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::: :::::.::::::.::::::::::::::::::::.::::::::::::::::: gi|119 MGHQLRGSPERTCLLNGSWSGLQPVCEAVSCGNPGTPTNGMIVSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|119 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLANGIQFGTDFTFNKTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY .:: :: :::::::: :: :.:.:::::: ::::: :: :::::::::.::::::.::: gi|119 VMEAVTSATIRCTKDGRWNPSKPVCKAVLCPQPPPVQNGTVEGSDFRWGSSISYSCMDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::.:::::::::::: ::::::::::::.:::::.::: ::.: gi|119 QLSHSAILSCEGRGVWKGEIPQCLPVFCGDPGIPAEGRLSGKSFTYKSEVFFQCKSPFIL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY ::::::.::::: :::::::::::::..:::::::::::::::.:::::::::::::::: gi|119 VGSSRRVCQADGTWSGIQPTCIDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|119 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPTFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .::::::.::.:::::::::: gi|119 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFVNSLWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK ::::::::::::::::::::::. :: :.:.:::.:::::::::::::.::: ::::::: gi|119 RQPATLTVDWFNATSSKVNATFSEASPVELKLTGIYKKEEAHLLLKAFQIKGQADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::.:::::::::::::::::::: : : :::.::.:::::: gi|119 FENDNWGLDGYVSSGLERGGFTFQGDIHGKDFGKFKLERQDPLNPDQDSSSHYHGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|119 AKAVRFDTTLNTVCTVV 3550 3560 >>gi|157502199|ref|NP_150094.4| CUB and Sushi multiple d (3565 aa) initn: 5808 init1: 4458 opt: 4458 Z-score: 5192.5 bits: 973.9 E(): 0 Smith-Waterman score: 5782; 90.079% identity (95.378% similar) in 887 aa overlap (4-875:2679-3565) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|157 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::::::::::::::::::::::::::::::.:::.::::::.:::::.:: gi|157 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : :::.:::::::::::::::: :::::::::: ::::.:::::::::::::: :..::: gi|157 YLLQGVSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSILYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : ::::::::::::::.:::::::::::::::::::::::::::::::::::.:.:::.: gi|157 KKGFYLLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGAVVHYSCRG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE .. : ::.::::::::::::.::::.::.::::::::::::::::::.:::::::::::: gi|157 SESLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDDFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::: :::::.::::::.::::::::::::::::::::.::::::::::::::::: gi|157 MGHQLRGSPERTCLLNGSWSGLQPVCEAVSCGNPGTPTNGMIVSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|157 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLANGIQFGTDFTFNKTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY .:: :: :::::::: :: :.:.:::::: ::::: :: :::::::::.::::::.::: gi|157 VMEAVTSATIRCTKDGRWNPSKPVCKAVLCPQPPPVQNGTVEGSDFRWGSSISYSCMDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::.:::::::::::: ::::::::::::.:::::.::: ::.: gi|157 QLSHSAILSCEGRGVWKGEIPQCLPVFCGDPGIPAEGRLSGKSFTYKSEVFFQCKSPFIL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY ::::::.::::: :::::::::::::..:::::::::::::::.:::::::::::::::: gi|157 VGSSRRVCQADGTWSGIQPTCIDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|157 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPTFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .::::::.::.:::::::::: gi|157 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFVNSLWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK ::::::::::::::::::::::. :: :.:.:::.:::::::::::::.::: ::::::: gi|157 RQPATLTVDWFNATSSKVNATFSEASPVELKLTGIYKKEEAHLLLKAFQIKGQADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::.:::::::::::::::::::: : : :::.::.:::::: gi|157 FENDNWGLDGYVSSGLERGGFTFQGDIHGKDFGKFKLERQDPLNPDQDSSSHYHGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|157 AKAVRFDTTLNTVCTVV 3550 3560 >>gi|38604975|sp|Q96PZ7.2|CSMD1_HUMAN RecName: Full=CUB (3565 aa) initn: 5802 init1: 4452 opt: 4452 Z-score: 5185.4 bits: 972.6 E(): 0 Smith-Waterman score: 5776; 89.966% identity (95.378% similar) in 887 aa overlap (4-875:2679-3565) 10 20 30 mKIAA1 ATPGHCGSPDPIVNGHISGDGFSYRDTVVYQCN :::::::::::::::::::::::::::::: gi|386 CNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCN 2650 2660 2670 2680 2690 2700 40 50 60 70 80 90 mKIAA1 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTG ::::::::::::::::::::::::::::::::::::::::.:::.::::::.:::::.:: gi|386 PGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTG 2710 2720 2730 2740 2750 2760 100 110 120 130 140 150 mKIAA1 YRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRHGQQNFPESFEYGTSVMYHC : :::.:::::::::::::::: :::::::::: ::::.:::::::::::::: :..::: gi|386 YLLQGVSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSILYHC 2770 2780 2790 2800 2810 2820 160 170 180 190 200 210 mKIAA1 KTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGATVQYSCKG : ::.:::::::::::.:::::::::::::::::::::::::::::::::::.:.:::.: gi|386 KKGFHLLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGAVVHYSCRG 2830 2840 2850 2860 2870 2880 220 230 240 250 260 270 mKIAA1 GQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCE .. : ::.::::::::::::.::::.::.::::::::::::::::::.:::::::::::: gi|386 SESLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDDFKTKSLLRFSCE 2890 2900 2910 2920 2930 2940 280 290 300 310 320 330 mKIAA1 MGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWE :::::::: :::::.::::::.::::::::::::::::::::.::::::::::::::::: gi|386 MGHQLRGSPERTCLLNGSWSGLQPVCEAVSCGNPGTPTNGMIVSSDGILFSSSVIYACWE 2950 2960 2970 2980 2990 3000 340 350 360 370 380 390 mKIAA1 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGY :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|386 GYKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLANGIQFGTDFTFNKTVSYQCNPGY 3010 3020 3030 3040 3050 3060 400 410 420 430 440 450 mKIAA1 LMEPPTSPTIRCTKDGTWNQSRPLCKAVLCNQPPPVPNGKVEGSDFRWGASISYSCVDGY .:: :: :::::::: :: :.:.:::::: ::::: :: :::::::::.::::::.::: gi|386 VMEAVTSATIRCTKDGRWNPSKPVCKAVLCPQPPPVQNGTVEGSDFRWGSSISYSCMDGY 3070 3080 3090 3100 3110 3120 460 470 480 490 500 510 mKIAA1 QLSHSAILSCEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVL :::::::::::::::::::.:::::::::::: ::::::::::::.:::::.::: ::.: gi|386 QLSHSAILSCEGRGVWKGEIPQCLPVFCGDPGIPAEGRLSGKSFTYKSEVFFQCKSPFIL 3130 3140 3150 3160 3170 3180 520 530 540 550 560 570 mKIAA1 VGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGY ::::::.::::: :::::::::::::..:::::::::::::::.:::::::::::::::: gi|386 VGSSRRVCQADGTWSGIQPTCIDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVFFRCRKGY 3190 3200 3210 3220 3230 3240 580 590 600 610 620 630 mKIAA1 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFF :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|386 HIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHADVRAIDLPTFGYTLVYTCHPGFF 3250 3260 3270 3280 3290 3300 640 650 660 670 mKIAA1 LAGGSEHRTCKADMKWTGKSPVCK---------------IPSDVFFINSVWKGYYEYLGK :::::::::::::::::::::::: .::::::.::.:::::::::: gi|386 LAGGSEHRTCKADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFVNSLWKGYYEYLGK 3310 3320 3330 3340 3350 3360 680 690 700 710 720 730 mKIAA1 RQPATLTVDWFNATSSKVNATFTAASQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSK ::::::::::::::::::::::. :: :.:.:::.:::::::::::::.::: ::::::: gi|386 RQPATLTVDWFNATSSKVNATFSEASPVELKLTGIYKKEEAHLLLKAFQIKGQADIFVSK 3370 3380 3390 3400 3410 3420 740 750 760 770 780 790 mKIAA1 FENDNWGLDGYVSSGLERGGFSFQGDIHGKDFGKFKLERQDPSNSDADSSNHYQGTSSGS :::::::::::::::::::::.:::::::::::::::::::: : : :::.::.:::::: gi|386 FENDNWGLDGYVSSGLERGGFTFQGDIHGKDFGKFKLERQDPLNPDQDSSSHYHGTSSGS 3430 3440 3450 3460 3470 3480 800 810 820 830 840 850 mKIAA1 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 VAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTE 3490 3500 3510 3520 3530 3540 860 870 mKIAA1 AKAVRFDTTLNTVCTVV ::::::::::::::::: gi|386 AKAVRFDTTLNTVCTVV 3550 3560 875 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 07:07:21 2009 done: Mon Mar 16 07:15:54 2009 Total Scan time: 1123.920 Total Display time: 0.810 Function used was FASTA [version 34.26.5 April 26, 2007]