FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00002.ptfa, 1486 aa vs ./tmplib.26680 library 1767531 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.7707+/-0.00461; mu= 19.8144+/- 0.308 mean_var=94.6187+/-21.183, 0's: 0 Z-trim: 5 B-trim: 8 in 1/35 Lambda= 0.1319 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1520 ( 782 res) mbh00594 ( 782) 422 91 7.5e-19 mKIAA0822 ( 1574 res) mic38093 (1574) 233 56 7.7e-08 mKIAA1888 ( 609 res) mbg15934 ( 609) 217 52 3.5e-07 >>mKIAA1520 ( 782 res) mbh00594 (782 aa) initn: 448 init1: 237 opt: 422 Z-score: 430.8 bits: 91.4 E(): 7.5e-19 Smith-Waterman score: 530; 25.898% identity (27.733% ungapped) in 529 aa overlap (972-1478:245-760) 950 960 970 980 990 1000 mFLJ00 LFSPGNLYTPLLSTPLHKAASNGTADVHFYLIVYATIAGVNSLCTLLRAVLFAAGALQAA ..: .: .:: . .:. .:. . mKIAA1 ALGETFLPYYTGRAIDSIVIQKSMDQFTTAVVVVCLLAIGSSLAAGIRGGIFTLVFARLN 220 230 240 250 260 270 1010 1020 1030 1040 1050 1060 mFLJ00 ASLHHRLLHRLLMAPVTFYDSTPSGRVLNRFSSDVACVDDSLPFLLNILLANSVGLLGLL :.. :.. :. ..:.: . .: ...:..::.. :.: . .::.: :.: . :.. mKIAA1 IRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRNTVKVTGVV 280 290 300 310 320 330 1070 1080 1090 1100 1110 1120 mFLJ00 AVLGSGLPWLLLLLPPLSF-VYYSVQGYYRASFRELRRLGSLTWSPLYSHLADTLAGLPV . . : : : : :. ..: . . :.. : ...: . . . . . .:.... . mKIAA1 VFMFS-LSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKT 340 350 360 370 380 390 1130 1140 1150 1160 1170 mFLJ00 LRAAGATYR----FEEENQRLLELNQRCQFASYATMQWLDIRLQLMGAAVVSAIAGIALV .:. . . : .. :.. .::.. . :.: .. : :.... .. .... mKIAA1 VRSFANEEEEAEVFLRKLQQVYKLNRK-EAAAYMSYVW--------GSGLTLLVVQVSIL 400 410 420 430 440 1180 1190 1200 1210 1220 mFLJ00 QHQQGLANPGAIGSPTSSAVAL---TLAT-PHSSPSVSPALLFSPS-------FLLPFPQ . :. : ..: . : . .:. .: :: .:. . . :. : mKIAA1 YYGGHLVISGQMSSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPT 450 460 470 480 490 500 1230 1240 1250 1260 1270 1280 mFLJ00 SPHQQRISW-LTQGSVEFQDVVLVYRPGLPN--ALDGVTFRVEPGEKLGIVGRTGSGKSS :. .. .: :.:..:...:: :. .:..:.: . ::. ..:: .:::::: mKIAA1 MVHDGSLAPDHLEGRVDFENVTFTYRTR-PHTQVLQNVSFSLSPGKVTALVGPSGSGKSS 510 520 530 540 550 560 1290 1300 1310 1320 1330 1340 mFLJ00 LFLVLFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHE .: . ..::::::. . . :. .... ::: ::. .: .:.. :: mKIAA1 CVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNIS-YGLPT 570 580 590 600 610 620 1350 1360 1370 1380 1390 mFLJ00 ---DRALWQALEQCHLSEVAVAMGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCI . .. : . . . . : . : ::.: .:: ::.: . .::::. . .: . mKIAA1 VPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLIL 630 640 650 660 670 680 1400 1410 1420 1430 1440 1450 mFLJ00 DEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSA ::::...: ... :.::.: . .::: :::::.:. . ..::. ::::. . . mKIAA1 DEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQ 690 700 710 720 730 740 1460 1470 1480 mFLJ00 LRNQPHSLFQQLLQSSQQGAHSGPSGC : : .:. .:.: .. : mKIAA1 LLAQG-GLYAKLVQRQMLGLEHPLDYTASHKEPPSNTEHKA 750 760 770 780 >>mKIAA0822 ( 1574 res) mic38093 (1574 aa) initn: 139 init1: 112 opt: 233 Z-score: 233.1 bits: 55.9 E(): 7.7e-08 Smith-Waterman score: 233; 27.953% identity (30.472% ungapped) in 254 aa overlap (1211-1451:401-646) 1190 1200 1210 1220 1230 mFLJ00 GLANPGAIGSPTSSAVALTLATPHSSPSVSPALLFSPSFLLPFPQSPHQ-QRISWLTQG- :: .. . . : :.: . . .: .: mKIAA0 YFEKVLPNEYGHQHSPLFFLKSSFWLQTRKPAHVILEDGIDPVPSSGDSFEPVSPEFHGK 380 390 400 410 420 430 1240 1250 1260 1270 1280 1290 mFLJ00 -SVEFQDVVLVYRPGLPN---ALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPN :...... :. : :: :: .:. . :. ...:..:.:::.:. .: : :. mKIAA0 ESIRIRNISKEYK-GKPNKIEALKDLTLDIYEGQITAVLGHSGAGKSTLLNILSGLSVPT 440 450 460 470 480 1300 1310 1320 1330 1340 mFLJ00 AGRVLLDNVDTSQLELAELRSQL---AVIPQEPFLFSG-TIRENLDPQGLHEDRALW-QA : : . : . : :.:.:.. : .: :: :. :.:::: . . . :.. : mKIAA0 KGSVTIYNNNLS--EMADLENILRIAGVCPQANVQFDFLTVRENL--RLFAKIRGIPPQD 490 500 510 520 530 540 1350 1360 1370 1380 1390 1400 mFLJ00 LEQ-CHLSEVAVAMGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQ .:. . . . : .... :. :::: ::.. : .. :.: :..:. .:: ::..: mKIAA0 VEKEVQRVLLELEMKNIQNILA---QNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDP 550 560 570 580 590 600 1410 1420 1430 1440 1450 1460 mFLJ00 KTDQLLQQTICKRFANKTVLTIAHRLNTI-LNSDRVLVLQAGRVVELDSPSALRNQPHSL . . . . . .: :...:: .. .. . .:: . .. ::. mKIAA0 FSRHRVWNLLKERRADRVVLFSTQFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGVG 610 620 630 640 650 660 1470 1480 mFLJ00 FQQLLQSSQQGAHSGPSGC mKIAA0 YHLSLQLKEVCVPENITSLVKQHIPAAKLSAEGEGKLLYTLPLETTYRFPELCQSLDSCP 670 680 690 700 710 720 >>mKIAA1888 ( 609 res) mbg15934 (609 aa) initn: 120 init1: 120 opt: 217 Z-score: 221.3 bits: 52.3 E(): 3.5e-07 Smith-Waterman score: 217; 24.038% identity (24.876% ungapped) in 208 aa overlap (1260-1463:286-490) 1230 1240 1250 1260 1270 1280 mFLJ00 QRISWLTQGSVEFQDVVLVYRPGLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFR ..: :. :: ::..: .:.:::... .: mKIAA1 AIMVCNLHKEYDDKKDFLHSRKTTKVATKYISFCVKKGEILGLLGPNGAGKSTVINTLVG 260 270 280 290 300 310 1290 1300 1310 1320 1330 1340 mFLJ00 LLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQ-EPFLFSGTIRENLDPQGLHEDRALWQ .::..:...: . . . : : . .. :: .:. . :..:... : . . . mKIAA1 DVEPTSGKIFLGDYGSHSSEDDESIKCMGYCPQTNPLWPDLTLQEHFEIYGAVKGMSPGD 320 330 340 350 360 370 1350 1360 1370 1380 1390 1400 mFLJ00 ALEQCHLSEVAVAMGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQ : .:... :. : .: . ..: : .. ::.: ..: . .. .:: ....: mKIAA1 MKEV--ISRITKALD-LKEHLQKTVKKLPAGIKRKLCFALSMLGNPQVTLLDEPSTGMDP 380 390 400 410 420 430 1410 1420 1430 1440 1450 1460 mFLJ00 KTDQLLQQTICKRFANK--TVLTIAHRLNTILN-SDRVLVLQAGRVVELDSPSALRNQPH .. : . ..: : :: ..: .: .. ::: .. .:.. . . . :... mKIAA1 RAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFG 440 450 460 470 480 490 1470 1480 mFLJ00 SLFQQLLQSSQQGAHSGPSGC mKIAA1 KGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQESFSSILAFKIPKEDVQSLSQSFAK 500 510 520 530 540 550 1486 residues in 1 query sequences 1767531 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:05:56 2006 done: Mon Mar 27 10:05:58 2006 Scan time: 1.260 Display time: 0.170 Function used was FASTA [version 3.4t11 Apr 17, 2002]