# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg12326.fasta.nr -Q ../query/mKIAA1533.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1533, 290 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920985 sequences Expectation_n fit: rho(ln(x))= 5.3095+/-0.000189; mu= 9.4553+/- 0.011 mean_var=73.8405+/-14.406, 0's: 32 Z-trim: 35 B-trim: 2830 in 1/67 Lambda= 0.149254 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148691998|gb|EDL23945.1| GRAM domain containing ( 494) 1326 294.4 2.8e-77 gi|26350799|dbj|BAC39036.1| unnamed protein produc ( 494) 1326 294.4 2.8e-77 gi|148692000|gb|EDL23947.1| GRAM domain containing ( 538) 1326 294.4 3e-77 gi|74191799|dbj|BAE32853.1| unnamed protein produc ( 646) 1326 294.4 3.4e-77 gi|74178223|dbj|BAE29897.1| unnamed protein produc ( 646) 1326 294.4 3.4e-77 gi|147645089|sp|Q8VEF1.2|GRM1A_MOUSE RecName: Full ( 722) 1326 294.5 3.8e-77 gi|148692001|gb|EDL23948.1| GRAM domain containing ( 722) 1326 294.5 3.8e-77 gi|148691999|gb|EDL23946.1| GRAM domain containing ( 803) 1326 294.5 4.1e-77 gi|17391321|gb|AAH18554.1| Gramd1a protein [Mus mu ( 647) 1306 290.1 6.8e-76 gi|149056226|gb|EDM07657.1| GRAM domain containing ( 495) 1283 285.1 1.7e-74 gi|62122956|ref|NP_001014182.1| GRAM domain contai ( 682) 1283 285.2 2.2e-74 gi|76780260|gb|AAI05897.1| GRAM domain containing ( 682) 1283 285.2 2.2e-74 gi|37727814|gb|AAO45419.1| EG1RVC [Rattus norvegic ( 698) 1283 285.2 2.2e-74 gi|147645287|sp|Q3KR56.2|GRM1A_RAT RecName: Full=G ( 723) 1283 285.2 2.3e-74 gi|149056225|gb|EDM07656.1| GRAM domain containing ( 807) 1283 285.2 2.5e-74 gi|95768791|gb|ABF57383.1| hypothetical protein LO ( 711) 1208 269.1 1.7e-69 gi|194675137|ref|XP_873474.3| PREDICTED: GRAM doma ( 724) 1208 269.1 1.7e-69 gi|114676662|ref|XP_001157137.1| PREDICTED: hypoth ( 640) 1199 267.1 5.8e-69 gi|114676658|ref|XP_001157243.1| PREDICTED: GRAM d ( 681) 1199 267.1 6.1e-69 gi|114676660|ref|XP_001156933.1| PREDICTED: GRAM d ( 690) 1199 267.1 6.2e-69 gi|209969686|ref|NP_001129671.1| GRAM domain conta ( 713) 1199 267.1 6.3e-69 gi|121944494|sp|Q96CP6.2|GRM1A_HUMAN RecName: Full ( 724) 1199 267.1 6.4e-69 gi|168275504|dbj|BAG10472.1| GRAM domain-containin ( 725) 1199 267.1 6.4e-69 gi|114676656|ref|XP_524216.2| PREDICTED: GRAM doma ( 807) 1199 267.2 7e-69 gi|73948510|ref|XP_541699.2| PREDICTED: similar to ( 987) 1195 266.4 1.5e-68 gi|193786696|dbj|BAG52019.1| unnamed protein produ ( 486) 1190 265.1 1.8e-68 gi|194215293|ref|XP_001491709.2| PREDICTED: simila ( 735) 1189 265.0 2.9e-68 gi|22760671|dbj|BAC11289.1| unnamed protein produc ( 713) 1183 263.7 6.9e-68 gi|193783524|dbj|BAG53435.1| unnamed protein produ ( 806) 1182 263.5 8.8e-68 gi|157886088|emb|CAP09502.1| novel protein [Danio ( 554) 551 127.5 5.2e-27 gi|189530007|ref|XP_683776.3| PREDICTED: GRAM doma ( 909) 551 127.7 7.8e-27 gi|47208073|emb|CAF93589.1| unnamed protein produc ( 566) 540 125.2 2.8e-26 gi|149635297|ref|XP_001510727.1| PREDICTED: simila ( 702) 499 116.4 1.5e-23 gi|47125533|gb|AAH70451.1| Gramd1b protein [Mus mu ( 734) 498 116.2 1.8e-23 gi|147645398|sp|Q80TI0.2|GRM1B_MOUSE RecName: Full ( 738) 498 116.2 1.8e-23 gi|224083330|ref|XP_002191437.1| PREDICTED: simila ( 703) 497 116.0 2e-23 gi|26328871|dbj|BAC28174.1| unnamed protein produc ( 878) 498 116.2 2.1e-23 gi|148693572|gb|EDL25519.1| GRAM domain containing ( 893) 498 116.2 2.1e-23 gi|73954617|ref|XP_859362.1| PREDICTED: similar to ( 745) 497 116.0 2.1e-23 gi|149041385|gb|EDL95226.1| GRAM domain containing ( 541) 495 115.4 2.2e-23 gi|73954615|ref|XP_546470.2| PREDICTED: similar to ( 877) 497 116.0 2.4e-23 gi|126326508|ref|XP_001370199.1| PREDICTED: hypoth ( 879) 497 116.0 2.4e-23 gi|149716615|ref|XP_001503463.1| PREDICTED: simila ( 738) 496 115.8 2.4e-23 gi|149716611|ref|XP_001503464.1| PREDICTED: simila ( 871) 496 115.8 2.8e-23 gi|194673257|ref|XP_595500.4| PREDICTED: similar t ( 892) 496 115.8 2.8e-23 gi|109483347|ref|XP_217113.4| PREDICTED: similar t ( 878) 495 115.6 3.2e-23 gi|109109070|ref|XP_001108430.1| PREDICTED: simila ( 576) 491 114.6 4.2e-23 gi|67969800|dbj|BAE01248.1| unnamed protein produc ( 576) 491 114.6 4.2e-23 gi|119587951|gb|EAW67547.1| hCG39893, isoform CRA_ ( 694) 491 114.7 4.9e-23 gi|109109068|ref|XP_001108488.1| PREDICTED: simila ( 698) 491 114.7 4.9e-23 >>gi|148691998|gb|EDL23945.1| GRAM domain containing 1A, (494 aa) initn: 1326 init1: 1326 opt: 1326 Z-score: 1543.8 bits: 294.4 E(): 2.8e-77 Smith-Waterman score: 1326; 100.000% identity (100.000% similar) in 202 aa overlap (1-202:293-494) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|148 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRDRELAKAE :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR 450 460 470 480 490 220 230 240 250 260 270 mKIAA1 KLSLEEGGKDTRGLLSGLRRRKRPLSWRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEP >>gi|26350799|dbj|BAC39036.1| unnamed protein product [M (494 aa) initn: 1326 init1: 1326 opt: 1326 Z-score: 1543.8 bits: 294.4 E(): 2.8e-77 Smith-Waterman score: 1326; 100.000% identity (100.000% similar) in 202 aa overlap (1-202:293-494) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|263 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRDRELAKAE :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR 450 460 470 480 490 220 230 240 250 260 270 mKIAA1 KLSLEEGGKDTRGLLSGLRRRKRPLSWRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEP >>gi|148692000|gb|EDL23947.1| GRAM domain containing 1A, (538 aa) initn: 1326 init1: 1326 opt: 1326 Z-score: 1543.3 bits: 294.4 E(): 3e-77 Smith-Waterman score: 1326; 100.000% identity (100.000% similar) in 202 aa overlap (1-202:337-538) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|148 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRDRELAKAE :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR 490 500 510 520 530 220 230 240 250 260 270 mKIAA1 KLSLEEGGKDTRGLLSGLRRRKRPLSWRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEP >>gi|74191799|dbj|BAE32853.1| unnamed protein product [M (646 aa) initn: 1911 init1: 1326 opt: 1326 Z-score: 1542.1 bits: 294.4 E(): 3.4e-77 Smith-Waterman score: 1847; 89.506% identity (89.506% similar) in 324 aa overlap (1-290:217-540) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|741 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 190 200 210 220 230 240 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 250 260 270 280 290 300 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 310 320 330 340 350 360 160 170 180 190 200 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR-------- :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRVSSEIRYR 370 380 390 400 410 420 210 220 230 mKIAA1 --------------------------DRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS :::::::::::::::::::::::::::::::::: gi|741 KQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS 430 440 450 460 470 480 240 250 260 270 280 290 mKIAA1 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIVLIVLIA 490 500 510 520 530 540 gi|741 LNALLFYRLWSLERTAHTFESWHSLALAKGKFPQTATEWAEILALQKHFHSVEVHKWRQI 550 560 570 580 590 600 >>gi|74178223|dbj|BAE29897.1| unnamed protein product [M (646 aa) initn: 1911 init1: 1326 opt: 1326 Z-score: 1542.1 bits: 294.4 E(): 3.4e-77 Smith-Waterman score: 1847; 89.506% identity (89.506% similar) in 324 aa overlap (1-290:217-540) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|741 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 190 200 210 220 230 240 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 250 260 270 280 290 300 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 310 320 330 340 350 360 160 170 180 190 200 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR-------- :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRVSSEIRYR 370 380 390 400 410 420 210 220 230 mKIAA1 --------------------------DRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS :::::::::::::::::::::::::::::::::: gi|741 KQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS 430 440 450 460 470 480 240 250 260 270 280 290 mKIAA1 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIVLIVLIA 490 500 510 520 530 540 gi|741 LNALLFYRLWSLERTAHTFESWHSLALAKGKFPQTATEWAEILALQKHFHSVEVHKWRQI 550 560 570 580 590 600 >>gi|147645089|sp|Q8VEF1.2|GRM1A_MOUSE RecName: Full=GRA (722 aa) initn: 1911 init1: 1326 opt: 1326 Z-score: 1541.4 bits: 294.5 E(): 3.8e-77 Smith-Waterman score: 1847; 89.506% identity (89.506% similar) in 324 aa overlap (1-290:293-616) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|147 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 390 400 410 420 430 440 160 170 180 190 200 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR-------- :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRVSSEIRYR 450 460 470 480 490 500 210 220 230 mKIAA1 --------------------------DRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS :::::::::::::::::::::::::::::::::: gi|147 KQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS 510 520 530 540 550 560 240 250 260 270 280 290 mKIAA1 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIVLIVLIA 570 580 590 600 610 620 gi|147 LNALLFYRLWSLERTAHTFESWHSLALAKGKFPQTATEWAEILALQKHFHSVEVHKWRQI 630 640 650 660 670 680 >>gi|148692001|gb|EDL23948.1| GRAM domain containing 1A, (722 aa) initn: 1911 init1: 1326 opt: 1326 Z-score: 1541.4 bits: 294.5 E(): 3.8e-77 Smith-Waterman score: 1847; 89.506% identity (89.506% similar) in 324 aa overlap (1-290:293-616) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|148 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 390 400 410 420 430 440 160 170 180 190 200 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR-------- :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRVSSEIRYR 450 460 470 480 490 500 210 220 230 mKIAA1 --------------------------DRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS :::::::::::::::::::::::::::::::::: gi|148 KQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS 510 520 530 540 550 560 240 250 260 270 280 290 mKIAA1 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIVLIVLIA 570 580 590 600 610 620 gi|148 LNALLFYRLWSLERTAHTFESWHSLALAKGKFPQTATEWAEILALQKHFHSVEVHKWRQI 630 640 650 660 670 680 >>gi|148691999|gb|EDL23946.1| GRAM domain containing 1A, (803 aa) initn: 1911 init1: 1326 opt: 1326 Z-score: 1540.8 bits: 294.5 E(): 4.1e-77 Smith-Waterman score: 1847; 89.506% identity (89.506% similar) in 324 aa overlap (1-290:374-697) 10 20 30 mKIAA1 AEEDKEEQTDGLDASSSQTVTPVAEPLSSE :::::::::::::::::::::::::::::: gi|148 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDGLDASSSQTVTPVAEPLSSE 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMGA 410 420 430 440 450 460 100 110 120 130 140 150 mKIAA1 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSASV 470 480 490 500 510 520 160 170 180 190 200 mKIAA1 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR-------- :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRVSSEIRYR 530 540 550 560 570 580 210 220 230 mKIAA1 --------------------------DRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS :::::::::::::::::::::::::::::::::: gi|148 KQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLS 590 600 610 620 630 640 240 250 260 270 280 290 mKIAA1 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIVLIVLIA 650 660 670 680 690 700 gi|148 LNALLFYRLWSLERTAHTFESWHSLALAKGKFPQTATEWAEILALQKHFHSVEVHKWRQI 710 720 730 740 750 760 >>gi|17391321|gb|AAH18554.1| Gramd1a protein [Mus muscul (647 aa) initn: 1852 init1: 1267 opt: 1306 Z-score: 1518.8 bits: 290.1 E(): 6.8e-76 Smith-Waterman score: 1827; 88.923% identity (89.231% similar) in 325 aa overlap (1-290:217-541) 10 20 mKIAA1 AEEDKEEQTDG-LDASSSQTVTPVAEPLSS ::::::::::. :::::::::::::::::: gi|173 DHSQEPSPVGSRRGRVTPNLSRASSDADHGAEEDKEEQTDSQLDASSSQTVTPVAEPLSS 190 200 210 220 230 240 30 40 50 60 70 80 mKIAA1 EPTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 EPTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMG 250 260 270 280 290 300 90 100 110 120 130 140 mKIAA1 AERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 AERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSAS 310 320 330 340 350 360 150 160 170 180 190 200 mKIAA1 VVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR------- ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 VVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRVSSEIRY 370 380 390 400 410 420 210 220 230 mKIAA1 ---------------------------DRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPL ::::::::::::::::::::::::::::::::: gi|173 RKQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPL 430 440 450 460 470 480 240 250 260 270 280 290 mKIAA1 SWRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIV ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 SWRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSEPSVDQGPGAGIPSALVLISIVLIVLI 490 500 510 520 530 540 gi|173 ALNALLFYRLWSLERTAHTFESWHSLALAKGKFPQTATEWAEILALQKHFHSVEVHKWRQ 550 560 570 580 590 600 >>gi|149056226|gb|EDM07657.1| GRAM domain containing 1A, (495 aa) initn: 1244 init1: 1244 opt: 1283 Z-score: 1493.7 bits: 285.1 E(): 1.7e-74 Smith-Waterman score: 1283; 96.552% identity (99.507% similar) in 203 aa overlap (1-202:293-495) 10 20 mKIAA1 AEEDKEEQTDG-LDASSSQTVTPVAEPLSS ::::::.:::. :::::::::::::::::. gi|149 DRSQEPSPVGSRCGRVTPNLSRASSDADHGAEEDKEDQTDSQLDASSSQTVTPVAEPLSA 270 280 290 300 310 320 30 40 50 60 70 80 mKIAA1 EPTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHMG ::.:::::::.:::::::::::::::::::::::::::::::::::::::::::::::.: gi|149 EPAPPDGPTSNLGPLDLLSREELLTDTSNSSSSTGEEGDLAALLPDLSGRLLINSVFHVG 330 340 350 360 370 380 90 100 110 120 130 140 mKIAA1 AERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSKCHQRRVLTYTIPISNQLGPKSAS 390 400 410 420 430 440 150 160 170 180 190 200 mKIAA1 VVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLRDRELAKA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNKARLR 450 460 470 480 490 210 220 230 240 250 260 mKIAA1 EKLSLEEGGKDTRGLLSGLRRRKRPLSWRGHRDGPQHPDPDPCTQTSMHTSGSLSSRFSE 290 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 18:00:41 2009 done: Sat Mar 14 18:06:22 2009 Total Scan time: 789.760 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]