# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg11214.fasta.nr -Q ../query/mKIAA0237.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0237, 263 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919771 sequences Expectation_n fit: rho(ln(x))= 5.0142+/-0.00018; mu= 9.7384+/- 0.010 mean_var=66.3400+/-12.864, 0's: 42 Z-trim: 58 B-trim: 0 in 0/67 Lambda= 0.157466 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|41017686|sp|Q80U57.2|RIMS3_MOUSE RecName: Full= ( 307) 1706 396.0 4.1e-108 gi|149023850|gb|EDL80347.1| regulating synaptic me ( 307) 1701 394.8 9e-108 gi|41017517|sp|Q9JIR3.1|RIMS3_RAT RecName: Full=Re ( 307) 1697 393.9 1.7e-107 gi|149694616|ref|XP_001503313.1| PREDICTED: simila ( 308) 1672 388.2 8.6e-106 gi|41017811|sp|Q9UJD0.1|RIMS3_HUMAN RecName: Full= ( 308) 1672 388.2 8.6e-106 gi|109003204|ref|XP_001084127.1| PREDICTED: regula ( 308) 1672 388.2 8.6e-106 gi|168267228|dbj|BAG09670.1| regulating synaptic m ( 308) 1672 388.2 8.6e-106 gi|73976827|ref|XP_849264.1| PREDICTED: similar to ( 308) 1671 388.0 1e-105 gi|194665462|ref|XP_598160.4| PREDICTED: similar t ( 308) 1658 385.1 7.8e-105 gi|126330437|ref|XP_001381229.1| PREDICTED: simila ( 310) 1562 363.2 2.9e-98 gi|115291936|gb|AAI21921.1| Regulating synaptic me ( 308) 1519 353.5 2.5e-95 gi|118101687|ref|XP_425785.2| PREDICTED: hypotheti ( 309) 1488 346.4 3.3e-93 gi|122891221|emb|CAK04669.2| novel protein similar ( 305) 1444 336.4 3.4e-90 gi|148725553|emb|CAN87955.1| novel protein similar ( 319) 1444 336.5 3.5e-90 gi|118088916|ref|XP_419884.2| PREDICTED: similar t (1695) 1278 299.2 2.9e-78 gi|118087271|ref|XP_418375.2| PREDICTED: similar t (1658) 1267 296.7 1.6e-77 gi|126322189|ref|XP_001369482.1| PREDICTED: simila (1360) 1259 294.9 4.9e-77 gi|126322187|ref|XP_001369450.1| PREDICTED: simila (1528) 1259 294.9 5.4e-77 gi|24415910|gb|AAN59930.1| synaptic regulatory pro (1363) 1258 294.6 5.7e-77 gi|8925876|gb|AAF81653.1|AF199331_1 RIM2-5B [Rattu (1525) 1258 294.7 6.3e-77 gi|8925874|gb|AAF81652.1|AF199330_1 RIM2-5A [Rattu (1539) 1258 294.7 6.3e-77 gi|34395746|sp|Q9JIS1.1|RIMS2_RAT RecName: Full=Re (1555) 1258 294.7 6.4e-77 gi|34395823|sp|Q9EQZ7.1|RIMS2_MOUSE RecName: Full= (1530) 1255 294.0 1e-76 gi|148676834|gb|EDL08781.1| regulating synaptic me (1537) 1255 294.0 1e-76 gi|111600267|gb|AAI18980.1| Rims2 protein [Mus mus (1550) 1255 294.0 1e-76 gi|114621243|ref|XP_001157316.1| PREDICTED: simila (1367) 1253 293.5 1.3e-76 gi|114621233|ref|XP_001157433.1| PREDICTED: simila (1557) 1253 293.5 1.4e-76 gi|73974272|ref|XP_532300.2| PREDICTED: similar to (1324) 1250 292.8 2e-76 gi|73974256|ref|XP_859040.1| PREDICTED: similar to (1339) 1250 292.8 2e-76 gi|73974276|ref|XP_859414.1| PREDICTED: similar to (1527) 1250 292.9 2.2e-76 gi|73974274|ref|XP_849649.1| PREDICTED: similar to (1532) 1250 292.9 2.2e-76 gi|221044142|dbj|BAH13748.1| unnamed protein produ ( 498) 1244 291.2 2.3e-76 gi|10799014|gb|AAG23164.1|AF263307_1 rab3 interact ( 700) 1244 291.3 3.1e-76 gi|57160788|emb|CAI39600.1| regulating synaptic me ( 728) 1244 291.3 3.2e-76 gi|10799012|gb|AAG23163.1|AF263306_1 rab3 interact ( 740) 1244 291.3 3.2e-76 gi|10799010|gb|AAG23162.1|AF263305_1 rab3 interact ( 766) 1244 291.3 3.3e-76 gi|57160792|emb|CAI39604.1| regulating synaptic me ( 768) 1244 291.3 3.3e-76 gi|57160789|emb|CAI39601.1| regulating synaptic me ( 794) 1244 291.3 3.4e-76 gi|221040646|dbj|BAH12000.1| unnamed protein produ ( 980) 1244 291.4 4e-76 gi|119569172|gb|EAW48787.1| regulating synaptic me ( 993) 1244 291.4 4.1e-76 gi|119569179|gb|EAW48794.1| regulating synaptic me (1032) 1244 291.4 4.2e-76 gi|119569174|gb|EAW48789.1| regulating synaptic me (1058) 1244 291.4 4.3e-76 gi|119569173|gb|EAW48788.1| regulating synaptic me (1060) 1244 291.4 4.3e-76 gi|189530073|ref|XP_693100.3| PREDICTED: regulatin ( 656) 1240 290.3 5.5e-76 gi|73973278|ref|XP_867334.1| PREDICTED: similar to (1567) 1244 291.5 5.8e-76 gi|119901074|ref|XP_613769.3| PREDICTED: similar t (1568) 1244 291.5 5.8e-76 gi|73973276|ref|XP_867327.1| PREDICTED: similar to (1628) 1244 291.5 6e-76 gi|73973280|ref|XP_538998.2| PREDICTED: similar to (1691) 1244 291.5 6.2e-76 gi|34395763|sp|Q86UR5.1|RIMS1_HUMAN RecName: Full= (1692) 1244 291.5 6.2e-76 gi|126310373|ref|XP_001373346.1| PREDICTED: simila (1694) 1242 291.1 8.5e-76 >>gi|41017686|sp|Q80U57.2|RIMS3_MOUSE RecName: Full=Regu (307 aa) initn: 1706 init1: 1706 opt: 1706 Z-score: 2097.3 bits: 396.0 E(): 4.1e-108 Smith-Waterman score: 1706; 100.000% identity (100.000% similar) in 263 aa overlap (1-263:45-307) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|410 RNVVRSSSISGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTRLGAESQFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTRLGAESQFS 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 DFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 DFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYI 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA0 KAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 KAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMG 200 210 220 230 240 250 220 230 240 250 260 mKIAA0 MAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 MAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|149023850|gb|EDL80347.1| regulating synaptic membra (307 aa) initn: 1701 init1: 1701 opt: 1701 Z-score: 2091.2 bits: 394.8 E(): 9e-108 Smith-Waterman score: 1701; 99.620% identity (100.000% similar) in 263 aa overlap (1-263:45-307) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|149 RNVVRSSSISGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTRLGAESQFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTRLGAESQFS 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 DFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYI 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA0 KAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMG 200 210 220 230 240 250 220 230 240 250 260 mKIAA0 MAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 MAQIMLDELDLSAVVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|41017517|sp|Q9JIR3.1|RIMS3_RAT RecName: Full=Regula (307 aa) initn: 1697 init1: 1697 opt: 1697 Z-score: 2086.3 bits: 393.9 E(): 1.7e-107 Smith-Waterman score: 1697; 99.240% identity (100.000% similar) in 263 aa overlap (1-263:45-307) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|410 RNVVRSSSISGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTRLGAESQFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTRLGAESQFS 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 DFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 DFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYI 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA0 KAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 KAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMG 200 210 220 230 240 250 220 230 240 250 260 mKIAA0 MAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::::::::::.::::::.:::::::::::::::::::::::::::::::: gi|410 MAQIMLDELDLSAVVTGWYKFFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|149694616|ref|XP_001503313.1| PREDICTED: similar to (308 aa) initn: 1188 init1: 1188 opt: 1672 Z-score: 2055.6 bits: 388.2 E(): 8.6e-106 Smith-Waterman score: 1672; 97.727% identity (99.621% similar) in 264 aa overlap (1-263:45-308) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|149 RNVVRSSSISGEICGSQQAGGGAGTTTTKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF :::::::::::::::::::::::::::::::::::::::::::.::::::: :::::::: gi|149 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGTFIFPTTRLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.::::::::::::::.::::::::::::::::::::::::::::::::: gi|149 IKVYLLENGACLAKKKTKVAKKTCDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS ::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|149 GMAQIMLDELDLSAAVAGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|41017811|sp|Q9UJD0.1|RIMS3_HUMAN RecName: Full=Regu (308 aa) initn: 1188 init1: 1188 opt: 1672 Z-score: 2055.6 bits: 388.2 E(): 8.6e-106 Smith-Waterman score: 1672; 97.727% identity (99.621% similar) in 264 aa overlap (1-263:45-308) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|410 RNVVRSSSISGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF :::::::::::::::::::::::::::::::::::::::::::.::::::: :::::::: gi|410 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGTFIFPTTRLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.::::::..:::::::::::::::::::::::::::::::::::::::: gi|410 IKVYLLENGACLAKKKTKMTKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|109003204|ref|XP_001084127.1| PREDICTED: regulating (308 aa) initn: 1188 init1: 1188 opt: 1672 Z-score: 2055.6 bits: 388.2 E(): 8.6e-106 Smith-Waterman score: 1672; 97.727% identity (99.621% similar) in 264 aa overlap (1-263:45-308) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|109 RNVVRSSSISGEICGSQQAGGGAGTSTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF :::::::::::::::::::::::::::::::::::::::::::.::::::: :::::::: gi|109 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGTFIFPTTRLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.::::::..:::::::::::::::::::::::::::::::::::::::: gi|109 IKVYLLENGACLAKKKTKMTKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|168267228|dbj|BAG09670.1| regulating synaptic membr (308 aa) initn: 1188 init1: 1188 opt: 1672 Z-score: 2055.6 bits: 388.2 E(): 8.6e-106 Smith-Waterman score: 1672; 97.727% identity (99.621% similar) in 264 aa overlap (1-263:45-308) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::::::::::::::::::::::: gi|168 RNVVRSSSIGGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF :::::::::::::::::::::::::::::::::::::::::::.::::::: :::::::: gi|168 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGTFIFPTTRLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.::::::..:::::::::::::::::::::::::::::::::::::::: gi|168 IKVYLLENGACLAKKKTKMTKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|73976827|ref|XP_849264.1| PREDICTED: similar to Reg (308 aa) initn: 1194 init1: 1194 opt: 1671 Z-score: 2054.3 bits: 388.0 E(): 1e-105 Smith-Waterman score: 1671; 98.106% identity (99.242% similar) in 264 aa overlap (1-263:45-308) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG ::::::::::::::::::::::::::: :: gi|739 RNVVRSSSISGEICGSQQAGGGPGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQSEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|739 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPTTRLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IKVYLLENGACLAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS ::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|739 GMAQIMLDELDLTAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|194665462|ref|XP_598160.4| PREDICTED: similar to Re (308 aa) initn: 1221 init1: 1197 opt: 1658 Z-score: 2038.4 bits: 385.1 E(): 7.8e-105 Smith-Waterman score: 1658; 96.970% identity (98.864% similar) in 264 aa overlap (1-263:45-308) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG ::::::::::::::::::::.:::::: :: gi|194 RNVVRSSSISGEICGSQQAGDGTGTSTAKKRRSSLGAKMVAIVGLTQWSKGTLQLPQAEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF ::::::::::::::::.:::::::: :::::::::::::::::.::::::: :::::::: gi|194 ATKKLRSNIRRSTETGVAVEMRSRVPRQGSRESTDGSTNSNSSDGTFIFPTTRLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IKVYLLENGACLAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS 260 270 280 290 300 >>gi|126330437|ref|XP_001381229.1| PREDICTED: similar to (310 aa) initn: 1560 init1: 1123 opt: 1562 Z-score: 1920.5 bits: 363.2 E(): 2.9e-98 Smith-Waterman score: 1562; 91.635% identity (97.338% similar) in 263 aa overlap (1-262:47-309) 10 20 30 mKIAA0 RRSSLGAKMVAIVGLTQWSKSTLQLPQPEG :::::::::.::::::: :.:.:::::::: gi|126 VVRSSSISGEVFGGGGEQAGGTAGASTAKKRRSSLGAKMAAIVGLTQRSRSSLQLPQPEG 20 30 40 50 60 70 40 50 60 70 80 mKIAA0 ATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSEGTFIFPT-RLGAESQF . ::: :::::::::::::::::::::::::::::::::::::.::::::: :::::::: gi|126 GPKKLPSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGTFIFPTARLGAESQF 80 90 100 110 120 130 90 100 110 120 130 140 mKIAA0 SDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATY ::::::::::::::::::.::::::::::.:::::::::::::::::::: ::::::::: gi|126 SDFLDGLGPAQIVGRQTLGTPPMGDVHIAMMDRSGQLEVEVIEARGLTPKLGSKSLPATY 140 150 160 170 180 190 150 160 170 180 190 200 mKIAA0 IKAYLLENGACVAKKKTKVAKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM ::.::::::::.:::::.::::::::::.::::::::::::::::::::::::::::::: gi|126 IKVYLLENGACLAKKKTRVAKKTCDPLYHQALLFDEGPQGKVLQVIVWGDYGRMDHKCFM 200 210 220 230 240 250 210 220 230 240 250 260 mKIAA0 GMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS :::::.:.::::: .::::::::::::::::::: ::::::::::::.::::: gi|126 GMAQIVLEELDLSNVVTGWYKLFPTSSVADSTLGPLTRRLSQSSLESSTSPSCP 260 270 280 290 300 310 263 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 14:36:49 2009 done: Fri Mar 13 14:42:14 2009 Total Scan time: 758.370 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]