FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1146.ptfa, 342 aa vs ./tmplib.26680 library 1768675 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.8185+/-0.00409; mu= 19.4926+/- 0.275 mean_var=80.1188+/-19.252, 0's: 0 Z-trim: 24 B-trim: 18 in 1/35 Lambda= 0.1433 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1223 ( 600 res) mfj51380 ( 600) 207 52 8.7e-08 mKIAA1758 ( 1565 res) mic23055 (1565) 205 52 1.9e-07 mKIAA1148 ( 1589 res) mfj27189 (1589) 203 52 2.6e-07 mKIAA1977 ( 649 res) mph01546 ( 649) 196 50 4.4e-07 mFLJ00040 ( 638 res) mpm09196 ( 638) 189 49 1.2e-06 mKIAA1785 ( 617 res) mph01357 ( 617) 185 48 2.1e-06 mKIAA0229 ( 1198 res) mpf00455 (1198) 187 49 2.2e-06 mKIAA0946 ( 465 res) mbx00001 ( 465) 182 47 2.7e-06 mKIAA1728 ( 1313 res) mbg03474 (1313) 183 48 4.1e-06 mFLJ00246 ( 1454 res) mpm02140 (1454) 182 48 5e-06 mKIAA1139 ( 1224 res) mpg00286 (1224) 174 46 1.4e-05 mKIAA1306 ( 1347 res) mbg04314 (1347) 174 46 1.5e-05 mKIAA1250 ( 1693 res) mbg07525 (1693) 170 45 3.1e-05 mKIAA0396 ( 474 res) mbg02345 ( 474) 154 41 0.00015 mKIAA0957 ( 713 res) mfj01140 ( 713) 153 41 0.00022 mKIAA1716 ( 277 res) mbj00321 ( 277) 148 39 0.00027 mKIAA1334 ( 992 res) mpm09174 ( 992) 146 40 0.00071 mKIAA1981 ( 296 res) mic06024 ( 296) 138 37 0.0012 mKIAA4244 ( 902 res) msh08318 ( 902) 131 37 0.0058 mKIAA0041 ( 807 res) mbg03660 ( 807) 128 36 0.0084 mKIAA0379 ( 377 res) mtj01105 ( 377) 124 35 0.0098 >>mKIAA1223 ( 600 res) mfj51380 (600 aa) initn: 226 init1: 199 opt: 207 Z-score: 232.2 bits: 52.2 E(): 8.7e-08 Smith-Waterman score: 213; 28.846% identity (32.086% ungapped) in 208 aa overlap (5-200:108-306) 10 20 30 mKIAA1 GPSRHGGGRDRPRWTGRPGTRSAGPNLKEWLREQ ::. . ::: . . . . : mKIAA1 NIDQRGYDGRNALRVAALEGHRDIVELLFSHGADVNYKDADGRPTLYILALENQLTMAEY 80 90 100 110 120 130 40 50 60 70 80 mKIAA1 FCDH--PLEHCD---DTRLHDAAYVGDLQTLRNLLQ-EESYRSRINEKSVWCCGWLPCTP : .. .: : : :: . . : .. .: :. . . . ::: . mKIAA1 FLENGANVEASDAEGRTALHVSCWQGHVEMVRVLIACHADVNAADNEKR---------SA 140 150 160 170 180 90 100 110 120 130 140 mKIAA1 LRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEILLEAGADPNGSR :. :: :: . :..::..:: :: . .: ::: .:. .::.. ...::: ::::: . mKIAA1 LQSAAWQGHVKVVQLLIEHGAVVDHTCNQGATALCIAAQEGHVDVVQVLLEHGADPNHAD 190 200 210 220 230 240 150 160 170 180 190 200 mKIAA1 HHRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTP----DTRPPFS--RRLTSLVVCP . : . :.. :...:.: : .:::. . .: . .:: : .. ::.. mKIAA1 QFGRTAMRVAAKNGHSQIIKLLEKYGASSLNGCSPSPVHTMEQKPPQSAPSKMQSLTIRS 250 260 270 280 290 300 210 220 230 240 250 260 mKIAA1 LYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHGCEAAFVSL mKIAA1 NSSGGTGGGDLQPSLRGLPNGPAHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTT 310 320 330 340 350 360 >>mKIAA1758 ( 1565 res) mic23055 (1565 aa) initn: 186 init1: 186 opt: 205 Z-score: 225.9 bits: 52.4 E(): 1.9e-07 Smith-Waterman score: 207; 31.429% identity (34.161% ungapped) in 175 aa overlap (1-173:691-853) 10 20 30 mKIAA1 GPSRHGGGRDRPRWTGRPGTRSAGPNLKEW ::. .: :: . .... :. mKIAA1 ASSRSPGASDSLLVAASGWSPSLTPLLMSGGPAPLAG---RPTLLQQAAAQGNVTLLSML 670 680 690 700 710 40 50 60 70 80 mKIAA1 LREQFCDHPLEHCDD--TRLHDAAYVGDLQTLRNLLQEESYRSRINEKSVWCCGWLPCTP : :. : :.: . :..:: : . .: ::. :. : .:. :. :: mKIAA1 LNEEGLDINYS-CEDGHSALYSAAKNGHTDCVRLLLNAEA-RVDAADKN----GF---TP 720 730 740 750 760 90 100 110 120 130 140 mKIAA1 LRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEILLEAGADPNGSR : .::. :: .:...: .:... . ::: ::.: ::. : ..:::::.: . . mKIAA1 LCVAAAQGHFECIELLTAYNANINHSAAGGQTPLYLACKNGNKECIKLLLEAGTDRSIKT 770 780 790 800 810 820 150 160 170 180 190 200 mKIAA1 HHRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPFSRRLTSLVVCPLYISAA . ::.. : .: : :: :. . mKIAA1 RDGWTPIHAAVDTGNVDSLKLLMYHRVRAHGNSLSSEEPKSGLFSLNGGESPTGPSKPVV 830 840 850 860 870 880 >>mKIAA1148 ( 1589 res) mfj27189 (1589 aa) initn: 215 init1: 195 opt: 203 Z-score: 223.6 bits: 52.0 E(): 2.6e-07 Smith-Waterman score: 203; 34.746% identity (36.937% ungapped) in 118 aa overlap (87-200:687-801) 60 70 80 90 100 110 mKIAA1 LQTLRNLLQEESYRSRINEKSVWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDV ::: .::. :: . ::::. .:: . :.: mKIAA1 FSTVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVDFLLAQGASIALMDK 660 670 680 690 700 710 120 130 140 150 160 170 mKIAA1 KGQTALYVAVVNGHLESTEILLEAGADPNGSRHHRSTPVYHASRVGRDDILKALIRYGAD .: ::: : ..::: .. :.. :: . . .. ::. :. : .... :. .:: mKIAA1 EGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGAM 720 730 740 750 760 770 180 190 200 210 220 230 mKIAA1 VDVNHHLTPDTRPPFSR----RLTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGP .. :. . :..: : ::.:: mKIAA1 IE---HVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGCQTLPSRPRGPATWAMATSKPD 780 790 800 810 820 830 >>mKIAA1977 ( 649 res) mph01546 (649 aa) initn: 275 init1: 154 opt: 196 Z-score: 219.6 bits: 50.0 E(): 4.4e-07 Smith-Waterman score: 196; 30.435% identity (32.558% ungapped) in 138 aa overlap (46-182:89-218) 20 30 40 50 60 70 mKIAA1 GRPGTRSAGPNLKEWLREQFCDHPLEHCDDTRLHDAAYVGDLQTLRNLLQEESYRSRINE : : :.:.: .:. .:: : . . mKIAA1 TAASIGQHEVVKECVQRGELDLNKKNGGGWTALMYASYIGH-DTIVHLLLEAGVSVNVPT 60 70 80 90 100 110 80 90 100 110 120 130 mKIAA1 KSVWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTE : ::: .:.. :. . . ::...:::... :..: :::. . :: . .. mKIAA1 PE----GQ---TPLMLASSCGNESIAYFLLQQGAELEMKDIHGWTALFHCTSAGHQQMVK 120 130 140 150 160 170 140 150 160 170 180 190 mKIAA1 ILLEAGADPNGSRH-HRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPFSRR .:::.::. : . . ::...:. :.. :.. .. .:. ::. : mKIAA1 FLLESGANANVREPVYGYTPLMEAAASGHEIIVQYFLNHGVKVDTRDHSGATACMLARQF 180 190 200 210 220 230 200 210 220 230 240 250 mKIAA1 LTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHG mKIAA1 GHMKIVALMETHSPVLPKSLYRSPEKYEDLSSSDESWPVPQRQRPCQKKGLSIHEGPRAL 240 250 260 270 280 290 >>mFLJ00040 ( 638 res) mpm09196 (638 aa) initn: 408 init1: 189 opt: 189 Z-score: 211.8 bits: 48.5 E(): 1.2e-06 Smith-Waterman score: 189; 36.782% identity (36.782% ungapped) in 87 aa overlap (87-173:95-181) 60 70 80 90 100 110 mKIAA1 LQTLRNLLQEESYRSRINEKSVWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDV :::..:: :... .:::. ::: :. .: mFLJ00 CSCEDCEKLISGRLNDPSVVTPFSRDDRGQTPLHVAALCGQASLIDFLVSKGAVVNATDY 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 KGQTALYVAVVNGHLESTEILLEAGADPNGSRHHRSTPVYHASRVGRDDILKALIRYGAD .:.: :..: .: : .::. :. . . .. .::.. : :..: .:::. : mFLJ00 HGSTPLHLACQKGFQSVTLLLLHYKASTEVQDNNGNTPLHLACTYGQEDCVKALVYYDVQ 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 VDVNHHLTPDTRPPFSRRLTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQ mFLJ00 ACRLDIGNEKGDTALHIAARWGYEGIIETLLQNGAPTAVQNRLKETPLKCALNSKVILSI 190 200 210 220 230 240 >>mKIAA1785 ( 617 res) mph01357 (617 aa) initn: 533 init1: 176 opt: 185 Z-score: 207.5 bits: 47.7 E(): 2.1e-06 Smith-Waterman score: 185; 28.676% identity (30.709% ungapped) in 136 aa overlap (51-185:90-217) 30 40 50 60 70 80 mKIAA1 RSAGPNLKEWLREQFCDHPLEHCDDTRLHDAAYVGDLQTLRNLLQEESYRSRINEKSVWC :. .: :.....:: .. . .:. .. mKIAA1 LLEQCSASIEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLL---NHGASVNNTTL-- 60 70 80 90 100 110 90 100 110 120 130 140 mKIAA1 CGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEILLEA :::: : :: . : .:... :.... . .:.: :... .:: : .. ::: mKIAA1 ---TNSTPLRAACFDGHLEIVKYLVEHKADLEVSNRHGHTCLMISCYKGHKEIAQYLLEK 120 130 140 150 160 170 150 160 170 180 190 mKIAA1 GADPNGSRHHRSTPVYHASRVGRDDILKALIRYGADVDVNHH-LTPDTRPPFSRRLTSLV ::: : . . .: .. .. : ::.: :. : : .. . . .:: mKIAA1 GADVNRKSVKGNTALHDCAESGSLDIMKMLLMYCAKMEKDGYGMTPLLSASVTGHTNIVD 180 190 200 210 220 230 200 210 220 230 240 250 mKIAA1 VCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHGCEAAF mKIAA1 FLTHHAQTSKTERINALELLGATFVDKKRDLLGALKYWKKAMNMRYSDRTNIISKPVPQT 240 250 260 270 280 290 >>mKIAA0229 ( 1198 res) mpf00455 (1198 aa) initn: 301 init1: 115 opt: 187 Z-score: 206.9 bits: 48.5 E(): 2.2e-06 Smith-Waterman score: 187; 33.083% identity (36.667% ungapped) in 133 aa overlap (48-176:143-266) 20 30 40 50 60 70 mKIAA1 PGTRSAGPNLKEWLREQFCDHPLEHCDDTRLHDAAYVGDLQTLRNLLQEESYRSRINEKS :: ::. :: : .: :.:. ..:.::.. mKIAA0 AALNGHRDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVRLLIQQGPSHTRVNEQN 120 130 140 150 160 170 80 90 100 110 120 130 mKIAA1 VWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEIL : : :: :: . : :... .. . . : .: : .:.. :.:: ...: mKIAA0 NDNETALHC-----AAQYGHTEVVKALLEELTDPTMRNNKFETPLDLAALYGRLEVVKLL 180 190 200 210 220 140 150 160 170 180 190 mKIAA1 LEAGADPN----GSRHHRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPFSR : :: :: ..:.: ::.. :.: :. ....:. : : mKIAA0 L--GAHPNLLSCSTRKH--TPLHLAARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALF 230 240 250 260 270 280 200 210 220 230 240 250 mKIAA1 RLTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRH mKIAA0 GKTDVVQILLAAGIDVNIKDNRGLTALDTVRDLPSQKSQQIAALIEDHMTGKRSVKEVDR 290 300 310 320 330 340 >>mKIAA0946 ( 465 res) mbx00001 (465 aa) initn: 159 init1: 113 opt: 182 Z-score: 205.4 bits: 46.9 E(): 2.7e-06 Smith-Waterman score: 182; 28.571% identity (30.769% ungapped) in 140 aa overlap (44-181:160-291) 20 30 40 50 60 70 mKIAA1 WTGRPGTRSAGPNLKEWLREQFCDHPLEHCDDTRLHDAAYVGDLQTLRNLLQEESYRSRI ..: :: :. : :. . .:.. . : : mKIAA0 LHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLI 130 140 150 160 170 180 80 90 100 110 120 130 mKIAA1 NEKSVWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGH-LE . .. :. ...:: :: . : .:: :: .::..: .:.: :. :. : .. mKIAA0 DGEG--------CSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 190 200 210 220 230 240 140 150 160 170 180 190 mKIAA1 STEILLEAGADPN-GSRHHRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPF :..:: ... : :...:..: .. : .: ... :.. :..::... mKIAA0 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKGESALDLA 250 260 270 280 290 300 200 210 220 230 240 250 mKIAA1 SRRLTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVL mKIAA0 KQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLDI 310 320 330 340 350 360 >>mKIAA1728 ( 1313 res) mbg03474 (1313 aa) initn: 373 init1: 172 opt: 183 Z-score: 202.0 bits: 47.7 E(): 4.1e-06 Smith-Waterman score: 186; 32.090% identity (34.127% ungapped) in 134 aa overlap (45-178:534-659) 20 30 40 50 60 70 mKIAA1 TGRPGTRSAGPNLKEWLREQFCDHPLEHCDDTRLHDAAYVGDLQTLRNLLQEESYRSRIN .: : :: : .. . ::.. . :: : mKIAA1 SMGHSSVVQSLLGMAEEHEIEVNGTDTLWGETALTAAAGRGKVEICELLLERGAAVSRAN 510 520 530 540 550 560 80 90 100 110 120 130 mKIAA1 EKSVWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLEST ...: : :: :: :: . : .:. .: .:.: : .:.: :.:: .::: .. mKIAA1 RRGV------P--PLFCAARQGHWQVVRLLLDRGCDVNLSDKQGRTPLMVASCEGHLSTV 570 580 590 600 610 140 150 160 170 180 190 mKIAA1 EILLEAGADPNGSRHHRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPFSRR :.:: :: .. .. . . : :. ... :.. ::..: mKIAA1 EFLLSKGAALSSLDKEGLSALSWACLKGHRAVVQYLVEEGAEIDQTDKNGRTPLDLAAFY 620 630 640 650 660 670 200 210 220 230 240 250 mKIAA1 LTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHG mKIAA1 GDAETVLYLVEKGAVIEHVDHSGMRPLDRAIGCRNTAVVVTLLRKGAKLGNAAWAMATSK 680 690 700 710 720 730 >>mFLJ00246 ( 1454 res) mpm02140 (1454 aa) initn: 178 init1: 178 opt: 182 Z-score: 200.5 bits: 47.6 E(): 5e-06 Smith-Waterman score: 193; 34.884% identity (34.884% ungapped) in 86 aa overlap (87-172:1295-1380) 60 70 80 90 100 110 mKIAA1 LQTLRNLLQEESYRSRINEKSVWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDV : : ::: :: . ..:: .::..:. . mFLJ00 AASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNK 1270 1280 1290 1300 1310 1320 120 130 140 150 160 170 mKIAA1 KGQTALYVAVVNGHLESTEILLEAGADPNGSRHHRSTPVYHASRVGRDDILKALIRYGAD ::.: :..: .::.. ...:..:::: ... ... ::.. : : :. ... :.. mFLJ00 KGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQYLVKEVSQ 1330 1340 1350 1360 1370 1380 180 190 200 210 220 230 mKIAA1 VDVNHHLTPDTRPPFSRRLTSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQ mFLJ00 FPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEANKNASILLKELDLEKSREE 1390 1400 1410 1420 1430 1440 342 residues in 1 query sequences 1768675 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:37:12 2006 done: Mon Mar 27 10:37:13 2006 Scan time: 0.560 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]