FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0734.ptfa, 1159 aa vs ./tmplib.26680 library 1767858 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.1298+/-0.00413; mu= 16.5560+/- 0.276 mean_var=103.6733+/-23.238, 0's: 0 Z-trim: 7 B-trim: 8 in 1/35 Lambda= 0.1260 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00067 ( 891 res) msh44296 ( 891) 1088 209 2.4e-54 mKIAA4194 ( 320 res) mbg12940 ( 320) 201 47 4.1e-06 mKIAA1342 ( 499 res) mid23032 ( 499) 188 45 2.8e-05 mKIAA0080 ( 353 res) mbh01670 ( 353) 179 44 7e-05 mKIAA4186 ( 899 res) mfj00029 ( 899) 146 38 0.0082 >>mFLJ00067 ( 891 res) msh44296 (891 aa) initn: 1309 init1: 504 opt: 1088 Z-score: 1068.1 bits: 209.2 E(): 2.4e-54 Smith-Waterman score: 1539; 32.749% identity (35.012% ungapped) in 913 aa overlap (271-1153:1-884) 250 260 270 280 290 300 mKIAA0 PLPAKCIQVTEVKNSTLNPVWKEHFLFEIDDVNTDQLHLDIWDHDDDVSLAEACRKLNEV :. . ..:::.:: : :. . ::.:. mFLJ00 DIANASFHLDMWDLDTVESVRQ---KLGEL 10 20 310 320 330 340 350 360 mKIAA0 IGLKGMTRYFKQIVKSARANGTAGPTEDHTDDFLGCLNIPIREVPVAGADRWFKLEPRSS :.:. : ::. : . ::::: . . .... :.:: ::: . mFLJ00 TDLHGLRRIFKEARK-----------DKGQDDFLGNVVLRLQDLRCR-EDQWFPLEPCTE 30 40 50 60 70 370 380 390 400 410 420 mKIAA0 ASRVQGDCHLVLKLITTQRDTVMNQRGRSGFLSYLLLLSRVLRFEHRVEEPNSSSWRGEL . .:.::: ...: .: :. . :.. .. .. ::.... : .. .:.:: . : mFLJ00 TYPDRGQCHLQFQFIHKRRATAAS-RSQPSYTVHFHLLQQLVSHEVTQHQAGSTSWDASL 80 90 100 110 120 130 430 440 450 460 470 480 mKIAA0 SGPGTTVLCLHGAQSNLSPLQLAVLHWQVSSRHHQTRTLDYGYLLGLLEDVQAHWEEAAS : ..:.: ::..:..:: .. .. .: . :: .:. . . :: . ... .: .. mFLJ00 SPQAVTILFLHATQKDLSDFHQSMAQWLAYSRLYQSLEFPSSCLLHPITSIEYQWIQG-R 140 150 160 170 180 190 490 500 510 520 530 540 mKIAA0 LPQEQEESLADSFSAFSEFGLRLLRQLRDYFPATNSTAVYRLELLLKCLEKLQLFQPAFE : ::.: :: ::... .:: :.:..:. :: . : . ::. ::. : .. .. : mFLJ00 LKAEQREELATSFTSLLAYGLSLIRKFRSVFPLSVSDSPSRLQSLLRVLVQMCKMKAFGE 200 210 220 230 240 250 550 560 570 580 590 mKIAA0 ICPFETELSMDIAAALKRGNREWYDQLLNTKSPREQPGPQRLAG--LVELADIIYEDLQL .:: . ::. .. ::. :. ::. . . ..:: :: :..:.. .. :: mFLJ00 LCPDSAPLSQLVSEALRMGTVEWFHLM----QQHHQPMGILEAGKALLNLVQDVMGDLYQ 260 270 280 290 300 600 610 620 630 640 mKIAA0 CYGVYASLFHRQVA---------EEAWVLTEELSPKM----NL---EVASGLFELYLTLA : .. ..:: . : :....... . :: ... .::.::..: mFLJ00 CRRTWNKIFHNVLKIDLFSMAFLELQWLVAKRVQDHTVAAGNLVSPDIGESLFQLYVSLK 310 320 330 340 350 360 650 660 670 680 690 700 mKIAA0 DTQRFWSCIPGRESRSLALAGIHTPFLPAVKLWLQVLRDQAKWRLQGAVDVDTLEPVDAA . .. .:. . ::: :.: : ::. ::: . : :.: ::..::: :. mFLJ00 ELCQLGP-VPSDSREVLALDGFHRWFQPAIPSWLQKTYSVALERVQRAVQMDTLVPLGEL 370 380 390 400 410 420 710 720 730 740 750 760 mKIAA0 SKHSSSAATASLCLSHIQELWVRLAWPDPSQAQGLGTQLSQDMCEASLFYTELLRKKVDT .:::.::. : :...:.. .: :::: .: . ... .: :. .: : :.. .. mFLJ00 TKHSTSAVDLSTCFAQISHTARQLDWPDPEEAFMITVKFVEDTCRLALVYCSLIKARARE 430 440 450 460 470 480 770 780 790 800 810 mKIAA0 QPGAAGE--AVSEQLCVVLNNVELVRRASGQALRGLAWSE-----GASGLEGVLPRPLLS .. . ....::::.::.: .: . ::: :: :: : : . mFLJ00 LSAVQKDQSQAADMLCVVVNNMEQLRLIIDKLPTQLAWEALEQRVGAVLEEGQLQNTLHA 490 500 510 520 530 540 820 830 840 850 860 870 mKIAA0 CIQALDEDLHREAHTVTAHLTSKMVADIRKYIQHISLSPDSIQNDEAVAPLLKYLDEKLA .:. : .: .: . :. .. . : .::.. .:. ..:. ::.:.:. :: mFLJ00 QLQGALAGLGHEIRTGVRTLAEQLEVGIATHIQKLIGVKESVLPEDAILPLMKFLEVKLC 550 560 570 580 590 600 880 890 900 910 920 930 mKIAA0 LLNDALVKENLNRVLEALWELLLQAILQALSANRDVSADFYGRFHFTLEALVSFFHAEGQ .: ::.::.. .: :: : ..... :..:. : ::.. .:. : ::::: mFLJ00 YMNTNLVQENFSSLLTLLWTHTLTVLVEVASSQRSSSLA-SGRLKVALQNLEVCFHAEGC 610 620 630 640 650 660 940 950 960 970 980 990 mKIAA0 GLPLENLRDGSYKRLQEELRLHKCSTRECIEQFYLDKLKQRS-LEQNRFGRLTVRCHYEA ::: : :. ... ::..:.:. :.:: :.... ....:.. ..:.: .::. :.: mFLJ00 GLPPEALHTDTFQALQNDLELQAASSRELIQKYFCSRIQQQAETTSERLGAVTVKVSYRA 670 680 690 700 710 720 1000 1010 1020 1030 1040 1050 mKIAA0 AEQRLAVEVLHAADLLPLDANGLSDPFVIVELGPPHLFPLVRSQRTQVKARTLHPVYDEL .:::: ::.: :..:::::.:: ::::: . : : : :: : ..:: . . :::..:: mFLJ00 SEQRLRVELLSASSLLPLDSNGSSDPFVQLTLEPRHEFPEVAPRETQKHKKELHPLFDET 730 740 750 760 770 780 1060 1070 1080 1090 1100 1110 mKIAA0 FHFSVPAEACRRRGACVLFTVMDHDWLSTNDFAGEAALGLGGISGI---ARPHVGGGMRP :.: :::: :.. ::.:.::.::: :...:. ::: : : . :. :.: . :: mFLJ00 FEFLVPAEPCQKAWACLLLTVLDHDRLGADDLEGEAFLPLCRVPGLTDCAEPGEAPQMR- 790 800 810 820 830 840 1120 1130 1140 1150 mKIAA0 GQPITLHLRRPRAQVRSALRMLEGRTS-REAQEFVKKLKELEKCMEADL : : : . ::.::.: . :::: ::: .. : mFLJ00 -----LPLTYPAPNGDPILRLLESRKGDREAQAFVKLRRQRAKQASQHAP 850 860 870 880 890 >>mKIAA4194 ( 320 res) mbg12940 (320 aa) initn: 92 init1: 92 opt: 201 Z-score: 202.1 bits: 47.5 E(): 4.1e-06 Smith-Waterman score: 218; 29.221% identity (30.612% ungapped) in 154 aa overlap (979-1130:168-316) 950 960 970 980 990 1000 mKIAA0 RLQEELRLHKCSTRECIEQFYLDKLKQRSLEQNRFGRLTVRCHYEAAEQRLAVEVLHAAD : ...: . . .: . .:.: .:.: . mKIAA4 IIGEVKVPMNTVDLGQPIEEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLTVCILEAKN 140 150 160 170 180 190 1010 1020 1030 1040 1050 1060 mKIAA0 LLPLDANGLSDPFVIVELGPPHLFPLVRSQRTQVKARTLHPVYDELFHFSVPAEACRRRG : .:..:::::.: ..: .....: :: .::.: ..: : : .: : .. mKIAA4 LKKMDVGGLSDPYVKIHLMQNG--KRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQK-- 200 210 220 230 240 250 1070 1080 1090 1100 1110 1120 mKIAA0 ACVLFTVMDHDWLSTNDFAGEAALGLGGISGIARPHVGGGM-RPGQPITL-HLRRPRAQV . :. ::.:.: :. :. :. .: .. .: : . . : .::. : .:. .: mKIAA4 VQVVVTVLDYDKLGKNEAIGKIFVG-SNATGTELRHWSDMLANPRRPIAQWHSLKPEEEV 260 270 280 290 300 310 1130 1140 1150 mKIAA0 RSALRMLEGRTSREAQEFVKKLKELEKCMEADL . : mKIAA4 DALLGKNK 320 >>mKIAA1342 ( 499 res) mid23032 (499 aa) initn: 143 init1: 70 opt: 188 Z-score: 187.1 bits: 45.3 E(): 2.8e-05 Smith-Waterman score: 188; 33.884% identity (35.043% ungapped) in 121 aa overlap (973-1093:352-468) 950 960 970 980 990 1000 mKIAA0 RDGSYKRLQEELRLHKCSTRECIEQFYLDKLKQRSLEQNRFGRLTVRCHYEAAEQRLAVE .:. . ... :.: : :... . :.: mKIAA1 FSRDDVIGEVLIPLSGIELSDGKMLMTREIIKRNAKKSSGRGELLVSLCYQSTTNTLTVV 330 340 350 360 370 380 1010 1020 1030 1040 1050 1060 mKIAA0 VLHAADLLPLDANGLSDPFVIVELGPPHLFPLVRSQRTQVKARTLHPVYDELFHFSVPAE ::.: : :..:::::.: :.: : . ...:.:: : . :..::: :..: : mKIAA1 VLKARHLPKSDVSGLSDPYVKVNLY--HAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 390 400 410 420 430 1070 1080 1090 1100 1110 1120 mKIAA0 ACRRRGACVLFTVMDHDWLSTNDFAGEAALGLGGISGIARPHVGGGMRPGQPITLHLRRP . .. : : :.: . : :. :. .:: mKIAA1 SLEE--ISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHMLC 440 450 460 470 480 490 1130 1140 1150 mKIAA0 RAQVRSALRMLEGRTSREAQEFVKKLKELEKCMEADL mKIAA1 DG >>mKIAA0080 ( 353 res) mbh01670 (353 aa) initn: 203 init1: 80 opt: 179 Z-score: 180.0 bits: 43.5 E(): 7e-05 Smith-Waterman score: 179; 28.777% identity (29.851% ungapped) in 139 aa overlap (967-1104:198-332) 940 950 960 970 980 990 mKIAA0 LPLENLRDGSYKRLQEELRLHKCSTRECIEQFYLDKLKQRSLEQNRFGRLTVRCHYEAAE :. : .:. . :.: : :. . mKIAA0 VLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQLTRDIIKRNIQKCISRGELQVSLSYQPVA 170 180 190 200 210 220 1000 1010 1020 1030 1040 1050 mKIAA0 QRLAVEVLHAADLLPLDANGLS-DPFVIVELGPPHLFPLVRSQRTQVKARTLHPVYDELF ::..: ::.: : .: .::: .:.: :.. . . ...:.:: ::.::..: : mKIAA0 QRMTVVVLKARHLPKMDITGLSGNPYVKVNVYYGR--KRIAKKKTHVKKCTLNPVFNESF 230 240 250 260 270 280 1060 1070 1080 1090 1100 1110 mKIAA0 HFSVPAEACRRRGACVLFTVMDHDWLSTNDFAGEAALGLGGISGIARPHVGGGMRPGQPI ...:.. . : :.: : . :. .:. :: ... . : mKIAA0 IYDIPTDLLP--DISIEFLVIDFDRTTKNEVVGRLILGAHSVTTSGAEHWREVCESPRKP 290 300 310 320 330 340 1120 1130 1140 1150 mKIAA0 TLHLRRPRAQVRSALRMLEGRTSREAQEFVKKLKELEKCMEADL mKIAA0 IAKWHSLSEY 350 >>mKIAA4186 ( 899 res) mfj00029 (899 aa) initn: 121 init1: 89 opt: 146 Z-score: 142.9 bits: 38.0 E(): 0.0082 Smith-Waterman score: 146; 31.818% identity (32.941% ungapped) in 88 aa overlap (980-1067:765-849) 950 960 970 980 990 1000 mKIAA0 LQEELRLHKCSTRECIEQFYLDKLKQRSLEQNRFGRLTVRCHYEAAEQRLAVEVLHAADL :.:.:.. . .: .. : : : .: mKIAA4 APSMSSLNSLASSCFDLTDVSLNTEAGDSRQGRLGEIQLTVRYVCLRHCLRVLVNGCRNL 740 750 760 770 780 790 1010 1020 1030 1040 1050 1060 mKIAA0 LPLDANGLSDPFVIVELGPPHLFPLVRSQRTQVKARTLHPVYDELFHFSVPAEACRRRGA : ..: .::.: . : : . . . ..:.:: .::.:..:: :.: :: ..:. mKIAA4 TPCTSSG-ADPYVRIYLLPERRW--ASRKKTSVKQKTLEPLFDETFEFFVPMGEVQKRSL 800 810 820 830 840 850 1070 1080 1090 1100 1110 1120 mKIAA0 CVLFTVMDHDWLSTNDFAGEAALGLGGISGIARPHVGGGMRPGQPITLHLRRPRAQVRSA mKIAA4 DVAVKNSRPLGSHRRKELGKVLIDLSKQDLIKGFSQWYELTADGQPRS 860 870 880 890 1159 residues in 1 query sequences 1767858 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:27:29 2006 done: Mon Mar 27 10:27:30 2006 Scan time: 1.090 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]