FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1201.ptfa, 753 aa vs ./tmplib.26680 library 1768264 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.2862+/-0.00488; mu= 8.9674+/- 0.325 mean_var=120.5292+/-27.605, 0's: 0 Z-trim: 3 B-trim: 4 in 1/35 Lambda= 0.1168 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1533 ( 290 res) mbg12326 ( 290) 498 95 1.2e-20 mKIAA0882 ( 1229 res) mfj03243 (1229) 212 47 1.1e-05 mKIAA0676 ( 1268 res) mfj02220 (1268) 183 42 0.00034 >>mKIAA1533 ( 290 res) mbg12326 (290 aa) initn: 544 init1: 481 opt: 498 Z-score: 463.0 bits: 95.0 E(): 1.2e-20 Smith-Waterman score: 498; 44.910% identity (46.012% ungapped) in 167 aa overlap (349-512:37-202) 320 330 340 350 360 370 mKIAA1 LEEEVMEGDGSLEKELAIDNIIGEKIEIMAPVTS-PSLDFNDNEDIPTELSDSSD-THDE :..: ::. . :.. :. :.::. : .: mKIAA1 EQTDGLDASSSQTVTPVAEPLSSEPTPPDGPTSSLGPLDLLSREELLTDTSNSSSSTGEE 10 20 30 40 50 60 380 390 400 410 420 430 mKIAA1 GEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTNSPFLRDFMEQRRFSDIIFHPWKKEEN :.. :. ::::: .: ::......: ..::..::::. :..::.:.:. . ::... . mKIAA1 GDLAALLPDLSGRLLINSVFHMGAERLQQMLFSDSPFLQGFLQQRKFTDVTLSPWSSDSK 70 80 90 100 110 120 440 450 460 470 480 490 mKIAA1 GNQSRVILYTITLTNPLAPKTATVRETQTMYK-ASQESECYVIDAEVLTHDVPYHDYFYT .: ::. ::: ..: :.::.:.: ::::... . : . : :.:.::::. .::.::::: mKIAA1 CHQRRVLTYTIPISNQLGPKSASVVETQTLFRRGPQAGGC-VVDSEVLTQGIPYQDYFYT 130 140 150 160 170 180 500 510 520 530 540 550 mKIAA1 INRYTLTRVARNKSRLRVSTELRYRKQPWGFVKTFIEKNFWSGLEDYFRHLETELTKTES .:: . .::::.::: mKIAA1 AHRYCILGLARNKARLRDRELAKAEKLSLEEGGKDTRGLLSGLRRRKRPLSWRGHRDGPQ 190 200 210 220 230 240 >>mKIAA0882 ( 1229 res) mfj03243 (1229 aa) initn: 148 init1: 89 opt: 212 Z-score: 194.2 bits: 47.3 E(): 1.1e-05 Smith-Waterman score: 212; 34.783% identity (35.714% ungapped) in 115 aa overlap (106-219:106-218) 80 90 100 110 120 130 mKIAA1 VQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQ .:. :..:: .:. :.:. :::. mKIAA0 VTTFVRGKIQGIIAEYNKINDVKEDEDTEKFKEAIVKFHRLFG-MPEEEKLVNYYSCSYW 80 90 100 110 120 130 140 150 160 170 180 190 mKIAA1 RD-ILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSE . . :: .::: : .:: : .. :. :..: :: .. :. : :.:. :.: : : mKIAA0 KGRVPRQGWMYLSINHLCFSSFLMGREAKLVIRWVDITQLEKNATL-LLPDMIKVSTRSS 140 150 160 170 180 190 200 210 220 230 240 250 mKIAA1 KHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPD .:::. : ..:. .: .: . :. mKIAA0 EHFFSVFLNINETFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDA 200 210 220 230 240 250 >>mKIAA0676 ( 1268 res) mfj02220 (1268 aa) initn: 145 init1: 69 opt: 183 Z-score: 167.6 bits: 42.5 E(): 0.00034 Smith-Waterman score: 183; 32.174% identity (33.036% ungapped) in 115 aa overlap (106-219:143-255) 80 90 100 110 120 130 mKIAA1 VQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQ .:. . .:: : .:. :.:. : :.. mKIAA0 ITTFVKGKIHGIIAEENKNLQPQGDEDPGKFKEAELKMRKQFG-MPEGEKLVNYYPCTFW 120 130 140 150 160 170 140 150 160 170 180 190 mKIAA1 RD-ILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSE . . :: :::. : .:::: .. :. :.:. :. . :. : :.:..:.: : .. mKIAA0 KGRVPRQGWLYLTVNHLCFYSFLLGKEVSLVVQWVDVTRLEKNATL-LFPESIRVDTRDQ 180 190 200 210 220 230 200 210 220 230 240 250 mKIAA1 KHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPD . ::. : .:. .: .: . :. mKIAA0 ELFFSMFLNIGETFKLMEQLANLAMRQLLDSEGFLEDKALPRPIRPHKNISALKRDLDAR 240 250 260 270 280 290 753 residues in 1 query sequences 1768264 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:38:14 2006 done: Mon Mar 27 10:38:15 2006 Scan time: 0.850 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]