FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0902.ptfa, 1058 aa vs ./tmplib.26680 library 1767959 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.5318+/-0.00678; mu= 1.7481+/- 0.453 mean_var=227.2035+/-55.230, 0's: 0 Z-trim: 6 B-trim: 88 in 1/35 Lambda= 0.0851 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0403 ( 423 res) mbp11090 ( 423) 596 86 1.1e-17 mKIAA1686 ( 1205 res) mbg21605 (1205) 265 46 3.9e-05 >>mKIAA0403 ( 423 res) mbp11090 (423 aa) initn: 902 init1: 505 opt: 596 Z-score: 410.0 bits: 86.2 E(): 1.1e-17 Smith-Waterman score: 925; 36.052% identity (42.211% ungapped) in 466 aa overlap (585-1046:15-416) 560 570 580 590 600 610 mKIAA0 VPETTLYHTFQQSSLQHKSKKKNKGAISGKSKRRISCKDLGRGDCEGWLWKKKDAKSYFS :.:::::::::..::.:::.:::. ...: mKIAA0 HSPVHATLAGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLS 10 20 30 40 620 630 640 650 660 670 mKIAA0 QKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKIDRASECRKKYAFKACHPKIKSFY .::::.: ::: .::::: :. :::.::..: .: ..:::::.:: ::: ::.::.:: mKIAA0 NKWKKFWVVLKGSSLYWYSNQMAEKADGFVNLSDFTVERASECKKKNAFKINHPQIKAFY 50 60 70 80 90 100 680 690 700 710 720 730 mKIAA0 FAAEHLDDMNRWLNRINMLTAGYA--ERERIKQEQDYWSESDKEEADTPSTPKQDSPPPP ::::.:..:: :::.. :.: ..: : .... .:::..:. .. ..:::: mKIAA0 FAAENLQEMNVWLNKL-----GFAVTHQESITKDEECYSESEQEDPEVAV----EAPPPP 110 120 130 140 150 740 750 760 770 780 790 mKIAA0 YDTYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGSSAVSPIRKTASQ-R : . . .:: :.. .. .:. . . . . : . . .: : . ...:. : mKIAA0 YAS-------TTSSPVVRVDAAQWASSSSPKRRETSCSFSSLENTVKAPSQFSSSGSKER 160 170 180 190 200 800 810 820 830 840 850 mKIAA0 RSWQDLIET-PLTSSGLHYLQTLPLEDSVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPY .::...... : : .. ::: . . :.: :. : ..: . .. : mKIAA0 QSWHNIVNSSPATEDA-----GLPLTFAEQVHTLAFSEASNCQA--PENNC-ITSEGGLL 210 220 230 240 250 260 860 870 880 890 900 910 mKIAA0 PLAESERMQVLNGNGGKPRSFTLPRDSGFNHCCLNTPVSACDPQDDIQPPEVEEEEEEEE : :. . ::.: .: . :. mKIAA0 NLLSSDDTSSLNNN-----------------------------KDHLTVPD--------- 270 280 920 930 940 950 960 970 mKIAA0 EEAAGENVGEKNENREEKLGDSLQDLYRALEEASLSPLGEHRISTKMEYKLSFIKRCNDP .::: .....: . . : .. ::..::.:::::::..: ::: : . ::.:::..: mKIAA0 -RAAGSRMADREEIKSSE-DDEMEKLYKSLEQASLSPLGDRRPSTKKELRKSFVKRCKNP 290 300 310 320 330 340 980 990 1000 1010 1020 1030 mKIAA0 VMNEKLHRLRILKSTLKAREGEVAIIDKVLDNPDLTSKEFQQWKQMYLDLFLDICQSTTS .:::::..: :.:::: .: ..:.:...::.: ::......:: : :. :: :. . mKIAA0 SINEKLHKIRTLNSTLKCKEHDLAMINQLLDDPKLTARKYREWKVMNTLLIQDIYQQQAP 350 360 370 380 390 400 1040 1050 mKIAA0 NDPLSISSEVDVLTSSLTHTHSYIETHV .:: .:: ::: mKIAA0 QDPEVTPQEVMNPTSSDCVENSL 410 420 >>mKIAA1686 ( 1205 res) mbg21605 (1205 aa) initn: 236 init1: 126 opt: 265 Z-score: 184.5 bits: 46.0 E(): 3.9e-05 Smith-Waterman score: 265; 33.918% identity (37.179% ungapped) in 171 aa overlap (573-739:86-245) 550 560 570 580 590 600 mKIAA0 MDALRQDIMGTPVPETTLYHTFQQSSLQHKSKK-KNKGAISGKSKRRISCKDLGRGDCEG ::: .: : :.. :: . . :: mKIAA1 ISMINEASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRG---- 60 70 80 90 100 110 610 620 630 640 650 mKIAA0 WLWKKKDAKSYFSQKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKIDRAS---ECR ::.:. :. .. . ::: ::::.: :..: .:..: : : :: :.: . . mKIAA1 WLYKQ-DSTGM--KLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHIN 120 130 140 150 160 660 670 680 690 700 710 mKIAA0 KKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINMLTAGYAERERIKQEQDYWSESDKEEA .:::::: ::.....:: .. .:. :.. :: :. .. : .:. . . :: . mKIAA1 RKYAFKAAHPNMRTYYFCTDTGKEMELWMK--AMLDAALVQTEPVKR-ITFNFRVDKITT 170 180 190 200 210 220 720 730 740 750 760 770 mKIAA0 DTPSTPKQDSPPPPYDTYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGS :. :: :. . : . . :: mKIAA1 DSAST-KETNNIPNHRVLIRPEVQNHQKNKEISKIEEKRALEAERYGFQKDGQDRPLTKI 230 240 250 260 270 280 1058 residues in 1 query sequences 1767959 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:31:34 2006 done: Mon Mar 27 10:31:35 2006 Scan time: 1.060 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]